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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0003500 |
| Transcript ID | LotjaGi3g1v0003500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Magnesium transporter MRS2-like protein; TAIR: AT1G16010.1 magnesium transporter 2; Swiss-Prot: sp|Q9S9N4|MRS21_ARATH Magnesium transporter MRS2-1; TrEMBL-Plants: tr|I1M5Z6|I1M5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0003500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:441902..445598) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCAGCTATTAAATAATTTTTATAATGGCGGATCTCAAAGAGCGGCTACTTCCGCCAAAACCTGCATCAGCTTTTAAC CTTAGAGAGGTTTCCAACCGGCCATCTGCCTCTGGAAGGCAAACCTTTCAAGGAGTGGATGTTCTGGGGGTAAAGAAGCG AGGCCAAGGTATCCGGTCATGGATTCGTGTTGACACAGCTGGAAATTCTCAGGCGATTGAAGTAGACAAGTTTACTATGA TGAGACGTTGTGACCTACCTGCACGTGATCTTCGCCTACTCGATCCTTTGTTTGTCTACCCATCAACAATCCTTGGTAGG GAAAAAGCCATTGTTGTGAATCTAGAGCAGATACGGTGTATTATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTTGA TAGTTATGTATTGCATTATGTGATGGAGCTACAGCGGCGGTTGACGACAACTGGGGCGGGTGAGGTCTGGCAATCAGACG ATTCTGACATGAACAGAAGGAGAGGAGGTAGTAGGAATTTTGAAAATGCATTTAGCAACAGTTCCCCTGATTATTTACCT TTTGAGTTCAGGGCTCTTGAAGTTGCCCTGGAGGCTGCATGCACATTTCTTGATTCCCAGGTTTGTAGAATTGCATAATT AATTATTGGCTAACTTCTGTTGAGTTTTGGCTTATATTTTTTTTTCTTTATTCAGTAACTTGCTTTAGAAGCGAGAAATG GTTGCTTTGTATTTCTATAAGTTTACATAATAGATTAACTTTTGAGTTTCTACATGCTATGTGGGTGAAGCATTTCATTT TAAGGTTAAATGAATTTGTATGTAATTTTATCATGTGGATCATATGTTGCTTTGATGTGTACCTAATAGTCCGAAAGCCC ATTTGTGGTAATAGGATGCCAGGTCTTTAGAATCTTATGTTGCAGCTTTTTAGAGAAAGCCACATATATTGGATGAATAT CACCCTTGTTTCCTGTTGGCAGTTGCCCCTCTATCTCAGTCCTGTTTTGCATATTTTTCTGTCACCATGGTTATTGAGTG TATGCAGTTCGTTCTTCATCCTTTTGTAGAGGAAACCTCCAGAAGATGTTGTCTATTTTTCTTGTCATTGGTTTGCTGAA TCATGTTTGTCATGCATGCTCTAGGATATATGTTAGAAAACAGAAATATACTACATAAAACCATTCACTTATCTTTGCCT AGCAACTTTAGCTTTCGGGATAGTTGATTTATATAATGTTAACTGAGTTCCTTCACCTAAAAGGCTAAAAGCTTAAGTTT TTGGGATAATTGGTATCGGCGTCTCTATGACCATTGGTTTAGAGTTTGATCCTTACTATTCCCTTTCTTCAAATAAAAAA AGTTGAATTTCATTAAAAGGTCGAGATCAGTGGACCTATGCAATGTCCACGCTCAAAGCCCAAATTCTCTTGTATGAGGG GGCATATTAGAAATTAGAAATATAATACTTATAAGTTATAACAATTCATATGTCTTTACCTTGCAACTTAAGTGCCTTTT TGCATTTGTGTTGAGGCAATGTGAAAGCACATTTGCCCAATCCAACAAGTGTATTTCATTGGGTGAATGTGCATTGGAAT TTGCAATGATGATGTGTATTAGAAATTGGGAGGCCTATACTCAACCACAAAAGCTAGCTCAAGAGTTGAGGTTTGCACAA CCCTTATAAACACTTGATTGGCCTTATCTCTAGCCAATGTGGGACTTCTAACACACCCCCTCACGTCCAGGATTTGAACA GACTGGAACGTGGGAACAACAACGGGTGGCCCAAATATGGGAGGTCTCCACACAACAAATGGATCTAGGATAGGCTCTGA TACCATATTAGAAATTGGGAGGCCTATACTCAACCACAAAAGCTAGCTCAAGAGTTGAGGTTTGCACAACCCTTATAAAC ACTTGATTGGCCTTATCTCTAGCCAATGTGGGACTTCTAACAATGTGGAACAACATTCCAATGCATCTCATGCTTGCATA GGATATTCAAACAGCGTTCTGGATCCTCATGCTTGCATAGGATATATCTCTTTTTAATATTTTTGTTTATTTGATTTTGA TTAAATCAGTAACATTCTCTTTTCTGTTCTGTCCATTGGCAAAAGGCAGCAGAGTTAGAAATTGAGGCTTATCCATTGCT AGATGAACTGACATCAAAGATCAGTACTCTAAATTTGGAGCGTGTTCGTCGGTTGAAAAGCAGACTTGTTGCCCTGACTA GGAGGGTTCAGAAGGTGATGTTCATTTTGCATTATTCTTTCTTCACAGTTTTAAATTACGGGTACCATGTTTTTTCTGAG TTTTATTATTAAATTTTGCTTTATGGATGCGTACAATCAGGTCAGAGACGAAATAGAGCAGCTTATGGATGATGATGGTG ATATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGGGCGGAGTTGTCATTCTATGGAGATCAGTCTATGGTTGGATAT AAATCAGTTGACGGTGCATCCGTTTCTGCTCCAGTCTCTCCTGTTTCATCACCTCCTGATTCTCGGAGGCTTGAAAAGTG CCTGAGCATTGCGAGGAGTCGACATGAGAGCATGAGGAGTAGTGAAAGTGCTACAGAAAATATAGAAGAGCTTGAGATGT TATTAGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCGGTAAACACACTGCAATCTTCATTAACA TTTTTCTTTCTAGCTTCGCCACAGTTTATCAACCACTGTTCGCTCTTTTGTGTTTCAGCTGAAAGAATACATTGATGACA CGGAAGATTTCATCAACATTCAACTGGTGTGCTTTACTTCCTTTATTTTTCAAATTAGTCACCTCCTGGTTCATGTCAAT TTTATTTACCCCATTTTGTTCATGTTGCTCATAACCGATCATACATGCATGCACAATTTATCACACACGTTCACACAAAC ACACACAATTGGGAGAACGGGCATTTCAAAAGTTATTACTTTAAGACAACAGGTGCAAAGAACATTATAGATAAGACGAA TTGCACTTACTTCTCCTATGGTTTATGGTTTATCATTATTACACTGATCTCCTCTCTATTTTGTGAAATGCATTGACCTT TCCTCCTTCGTACACTATTTAGAATAATAGAGGGGTGCTGAGTGTTATAAATTATTAGGGAAGGTCGGTACAATAATGAC AAACTCTATGGGAGGTTAATGCAATGATCCCAATAAAATAAGGGGTGGTTAGTGTCTTGTTAAATAAAACAGGGAGGTCA GCGCAATAAATAAACCTCATGGGAGATCTGTGCAATTTCCCATAATATGTATAGATATATAGATCTGTTATGTGGTTTTC AGAGGGATTTTGTTATGGGGGCCAAAAAGAACAAAAATATGCATACATTATTGCCTTCATTTTATGTGATGATATGTGTA ATTCATTATTGAGTTCTTTTTTACAGGATAATGTTCGTAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACTGCAACA TTTGTGGTAGCCATCTTTGGTGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTTGATGTCCCTTCTGC ATTCCAGTGGGTCCTCATAATAACAGGAGTTTGTGGAGTCTTCATATTTTCTGCATTTGTGTGGTTCTTCAAGTACAGAA GACTCATGCCCCTATAG
CDS sequence (LotjaGi3g1v0003500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATCTCAAAGAGCGGCTACTTCCGCCAAAACCTGCATCAGCTTTTAACCTTAGAGAGGTTTCCAACCGGCCATC TGCCTCTGGAAGGCAAACCTTTCAAGGAGTGGATGTTCTGGGGGTAAAGAAGCGAGGCCAAGGTATCCGGTCATGGATTC GTGTTGACACAGCTGGAAATTCTCAGGCGATTGAAGTAGACAAGTTTACTATGATGAGACGTTGTGACCTACCTGCACGT GATCTTCGCCTACTCGATCCTTTGTTTGTCTACCCATCAACAATCCTTGGTAGGGAAAAAGCCATTGTTGTGAATCTAGA GCAGATACGGTGTATTATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCATTATGTGATGG AGCTACAGCGGCGGTTGACGACAACTGGGGCGGGTGAGGTCTGGCAATCAGACGATTCTGACATGAACAGAAGGAGAGGA GGTAGTAGGAATTTTGAAAATGCATTTAGCAACAGTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGC CCTGGAGGCTGCATGCACATTTCTTGATTCCCAGGCAGCAGAGTTAGAAATTGAGGCTTATCCATTGCTAGATGAACTGA CATCAAAGATCAGTACTCTAAATTTGGAGCGTGTTCGTCGGTTGAAAAGCAGACTTGTTGCCCTGACTAGGAGGGTTCAG AAGGTCAGAGACGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGACG GGCGGAGTTGTCATTCTATGGAGATCAGTCTATGGTTGGATATAAATCAGTTGACGGTGCATCCGTTTCTGCTCCAGTCT CTCCTGTTTCATCACCTCCTGATTCTCGGAGGCTTGAAAAGTGCCTGAGCATTGCGAGGAGTCGACATGAGAGCATGAGG AGTAGTGAAAGTGCTACAGAAAATATAGAAGAGCTTGAGATGTTATTAGAAGCATACTTTGTTGTCATTGACAGCACTCT AAACAAGTTGACATCGGATAATGTTCGTAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTGGTAG CCATCTTTGGTGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTTGATGTCCCTTCTGCATTCCAGTGG GTCCTCATAATAACAGGAGTTTGTGGAGTCTTCATATTTTCTGCATTTGTGTGGTTCTTCAAGTACAGAAGACTCATGCC CCTATAG
Protein sequence (LotjaGi3g1v0003500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADLKERLLPPKPASAFNLREVSNRPSASGRQTFQGVDVLGVKKRGQGIRSWIRVDTAGNSQAIEVDKFTMMRRCDLPAR DLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTTGAGEVWQSDDSDMNRRRG GSRNFENAFSNSSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQ KVRDEIEQLMDDDGDMAEMYLTEKKRRAELSFYGDQSMVGYKSVDGASVSAPVSPVSSPPDSRRLEKCLSIARSRHESMR SSESATENIEELEMLLEAYFVVIDSTLNKLTSDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDVPSAFQW VLIITGVCGVFIFSAFVWFFKYRRLMPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 428 | 428 | 1.9E-230 | ||
| PANTHER | 1 | 428 | 428 | 1.9E-230 | – | |
| Phobius | 1 | 363 | 363 | - | – | |
| Gene3D | 44 | 123 | 80 | 1.1E-12 | – | |
| CDD | 52 | 425 | 374 | 6.37077E-112 | ||
| Gene3D | 154 | 279 | 126 | 1.2E-27 | – | |
| Coils | 225 | 252 | 28 | - | – | |
| TMHMM | 364 | 383 | 20 | - | – | |
| Phobius | 364 | 385 | 22 | - | – | |
| SUPERFAMILY | 365 | 418 | 54 | 1.83E-8 | – | |
| Gene3D | 366 | 425 | 60 | 4.7E-7 | – | |
| Phobius | 386 | 396 | 11 | - | – | |
| Phobius | 397 | 420 | 24 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 421 | 428 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0003500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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