Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0005400 |
| Transcript ID | LotjaGi3g1v0005400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | G protein-regulated inducer of neurite outgrowth 1; TAIR: AT1G15800.1 hypothetical protein; Swiss-Prot: sp|A8FDH3|MUTS_BACP2 DNA mismatch repair protein MutS; TrEMBL-Plants: tr|V7BXQ8|V7BXQ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0005400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:691255..697361) extracted from Lotus japonicus Gifu genome v1.2.
TACTTATAATTTTTTTATTAAATTGCTCTCATAATTACATCTTACATGTTGTGACAGCCAGAAATATTCCAAGAGTGCAG TTTGTAGGGATGCAATAGTTTTTACTTTTTGTTTTTTGATGAAGCAAACAAATCCTTAGACAGCCAAGGACTAACAGCAT CCAGGAGCATCTCAAGGCAAGTAAAGTCACACTAACAACCAGCTCCTAGCTTAGCACACAATAACATTGCAATGGTTTTT ATTTTTATGGTGTGTATGATTATTTGGATGGTAATGAAAAAAATAAGAAAAGGGGAGAAACAGTTTGGATTGGACACGTG CCGGAAAGGTGGGACCAGGAGGAATGATCCACAGCAAACAAACAACACAACACAATGGAGTCTCTTTTTCTTTCTCTCAA TTCAATTTCATACATAACATGACATAAGGAGCACAAGCACGCGCAGATAAACCAACCTTCCACTCCTTATTATTCATTTC CTTTCCTTTCCTTTCCTTTATTACTAATAATAATCATTTTCATTTATTCAAACATTCCAAACAAACGCCACACACACACA CACACACACACACACACCAGATGTGTGACCACGATGACTGGGTCAACCTCGCCATGGCCGATGACTCCACCGTCGCCGGC CTCCTCCTCAACCTCCACCACCGCCCTCATCCTCACCTCCACTGGACCGTCCGCCAGCGCCGCTCCACGCACAAAACCTC CCCCGCCACCACCAGGGCCAGCCCCACCACTCCCCTCTCCTGGAGCGGCGCCGCCACGTCAGTCAGCTGCGGCGCAAACA ACGTCGATAGCCACGAGGAGGAGTCTAGCCACCTCACAAAACATGCCGGAGCATCAAGATCTGATAAGGTTCGGTTTCTA AAGTTGATCTTCCATAACTATGTCTGTGTGTGTGTGTGTTTGTAGACATGACATGATGCAAAGTGTGTGTGGTGTGGCAG TTTCTTTTTTCCGAAACGAAAAGGCCCATTCCACGATGTGCGATATTTACGCACTTGCCTCGTTTTCCCTTCTTTCTCTT CTTCAACTTTCATTCTCTGCTGCATATATATATATATGCAGCTCCATGTTTGATTTTCCTTAAATTAAGTCTCAAATTTG AGTTTAATAGGTAGAAGATGTGAAGGTTTTCAGCTCAAACATAACATGACACTACGTAACAAAAAAATAAACATATGATA TATCACATCTCTTACTTTCTCTCTTTTCTATATTAACACTTTAATTAAATTAAAGTGTGAATATAACTTTATTGAGTATT TAATAGTTCAGGTAAAAGGTGTGACTTTGATTCAACTCATGGAGTCGGAGGAATGAATGACCTAGTCATAACACGTTTTT TCCTCGCCACTTATGACTTATCCCCCATGCCCTTATATGACCAAAAAGCCATTCATCATGAGGGTATTTTCGTCTCAAGA GAGGTGTTCCGTCTGTGTTGGAAGGAGTTGCAACTAATTTATTTGTTTATAGAGTGACATTAATTATGTTGTGTGGCATG GCTTTCGTGATCGGTAATCCAATGCGTGCGTGGGCGTGGCATTACTAATGCCAAAGATTCCCCGTGAGGGGTAATTCGGT AACATCACAGCCGGGTCATAATTTTATTTTATTTTCCTGGGTGGCGTGTCTTCATGGCAAATAGCTGATCTACCCTGCAA GTGCAAATGCTATTTGTTTGGTGTGGTGTTTGTTTGTTTGGTACTAGTGCTGCACTTTTTTGGTGCTCCTAGTTGCAATT TCTCTTTACTTTGGTTTAAAATTATTAATTAATAATAATTATTACTATTATCAACTACCTGATAAATGAGGCGGGGTTGT TAGTTCATAACTTCATATTGTTCCTTAACCATGACGTTGAGATTTAACCCTTGTCCATGAGAATGAAGCATATATTGTAG TTAGTCGTTTATCGCTTAGTGCGAGAATCTGTGGCGAGGGAATGTGCTATAAAAAAGTTGATAAATGTGTTACAATATCT GCATCACAGCTTGAACGCAAACTCACTGTGTTCAATGTCAAATAATAAGATAGTGCTGGCAAAAGTCAAAAGTAGGAATT CCGTTTGTTTTATTGTTTTTAACTTTTGGTTGAATAGGAATGCGGGTTTTTAATTGGGACCTATTATGTTTTTAATTAGT CTTTTTGTGCTTGGTGGGGTAGGGTCCAAAATGTGAGAATTTTTGTGTTTCAAACATGTGTATGGTTGAATACGCCTTGA AAATTTATAGTAAGTTAAAATCATGGTGAATAGACACAACTTTATTTAGCTTTTATGATTTTCACCGTAATTTACACCGT GTATCTAAGCATGTACATAGTTTAATGAAAACAGGTACAAATGAGAAAAGTGTAATAACTAATAACCTATATATTACTTC TTCTTCTTTGGGTCTAATAAAATAAGTAGAAAGAGAACAGATGAAGGAAGTTGCGAGCAAAGCACCTGGTAGAAAGGACA AGATTAGGAAAATAAAGGGGGGCGAGGGATGCTTCTGCTGTCTTAAATGGCACCAACGAATACAGTGATTTTGGTAGCTC CCAAACGAAAATGGGGACCACTTTGTCACCTAATTGATTATGGGATGAAAGCCTCTCTACCTAATGTCTTGTTAGTTATG GTTGTTTATTTATCACTATCCAGTTTTTTTTTTCATTTTCAAACACATTTTAATTTCAAAGATGTGGTCCAAATGGAATA AGTTTGGTTCTACACTAGTACTAGATAGCTTTTATTTATCACTATCCAATCTTTGGCCTTTCAAAAAACTAGATAGCTTT AATGTCACTTTTATACTTAGCGTAGGTTTGGATTTAAGTTGAACTCAACGTTACAAAGTTCTGCTTCAATATTTGGGCTA TGAAATTTTTGAAATCTCATTTGCATTGATGAAAATAGAAAATCAAACACTTAAGATTCCAACATTAAAAGAGAAAACAC ATTTTAATTAATTGGAATGGGAGAGTGGGGTTGCATTCAAAACATTTATCATTGCTCATTTATTTTGGATGGGTAGACAG TGATGAGAGTGATTTGTTTCTCTTACCCACCACCAAGCTCAGTAGATCACCAATCACCATCCTTCCTCTCAAAGAAATGT GCCTCTTTCTCAATCACAAGTGAGATTTACATGATGATACAGATACAGAATCACAGAAGTGTAGGGTATAAATGACAATT TCAAAGATTAGATTATAGAACTCTTCAATGGATGGTGAGTGAGTAGCCAAGCCTGCTTTTATGACTTTTGGCCTCATTGA GCAAGTATGGGGTAAGGTTACCTACCATCTTTTATTCTTTCTTGGTCCTCCCTCAAACAGCAGTGTAATATTGTCACTTG TTATTTTTTGTTATATTAGAATCCAATTTGTATACTACTTCACTGTATATTAATCCTGCTTTCGTGCCTTTTTTCTCTCA TAACATATTGCTGACACTAGAGGATCTAGATCAGAAAGGAAAAAAGCTTCAGTGAATGGGTTATCATAAGTATTTGTATC TGATTTGTCTTCAAAGTGATCATCATATTATGATGTTGTTATACACCATATTTGTCTGAGAATCTGTTTTCCAATAAAAT GTTTCAAGCCTTAAATTCTCCCACATTTTGTATTTGGCAGGTTGCTAATCCAAGTGAAACAGTCACTACTAAAAAGGCAA GAAGAAAAAAGGTAAATAAATATAAACTCTTTATTGTGTGTGTATTTTCCTAGATCTTCTTATAGGTTGTTCGAATTATA ATTCTAACGTTATAGGAACACCTGATTATGTGAATTGCGATCCGCTTTGCCAATGATATAGTGGGATGATAAAGGAGAAA ATATATTTTTAGGTTATGTAAGAATGCGATGAATATGAGTTAAGGTTAGGAATATTAGGATGATAGTGGATGCCTATAAT AGGATAAATATTTCTACATACCCTGTTTAGGCAATTTGGGCAGAATCTATTATAAACACACAATCACCTTATACAAAATA ACTATAATAGCTGTATAACCTGATCATTTGTATATTATTGGTTGGTTTAATCTCCCGACTTGTACCTAGAGGATCCTTAC TATTTCTCTTATATAGCAAAAGAAAAATGAGGCTGCAGGTAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGTGCCA ATAGTTGAGAGTGGAACTGAAGGAAGAATTCCAAGTTTTGTGACCTTAACCTAATTGGGCAATTGTTGGTAATTGAATAG ACTAAAGAACCAGTAGTTTTTATGATTTCATTGAGTCTGTTGTAAGCAAAGTGCAATTGATTGGCATTGAATCTGAGTTT GGTTGAGCCAACAACTAAAGATAAGATGATCAATATATAGGTTGTGACTTTTGTACTTTTGCTTCCAAGGCAATTTGGTC TGCATTTACCGTCACTTCTACATTAAAGTCAGGGGACTAACTATAGCCTCGTGTTTTTCATGCGTTCTTGTTATCACATA TGGATAAAATATCAATAGTTTTTTACTTTTTCTCCTTCTCTCAACAACTATGTATTTTTTCTCTCCTACTTTTAATTAAC TTCTTAACATATCTTAAACTTATGTCTATCGTGTTTGCAGACTTTAGCTGAATTAAAAGAGGAGGAGAGTTTGTTGTTGA AAGAAAGGAGAAATTTGAAAAATGTATGATTTCCACCATTTTCATGGATTTTATTTTCCGTCTGCATGTGTGCATCCTTA TGCTTGGAGATATATATTTCCTGCATGGTTTATTCAACAATATTGTTTGAATTTCTGAACAGGAACTGGCATCTTTGCGT ATTACTGTTGACCAACAGATAGCCACAAATGAAAGCTTAAAGAAAATGAAGGTGTACTTCTTGTTCTCTTCACCTCTTTA TAAGACCTTTTCTTTCTTCATTGTTTGACATTTCTTTCGCTCACTGTTGCATTCTATATTCGAAATCTCTAACCTAAACT ATTCAATGATGAATTAGTATATCTAATCTATTGAGACAAGATATAGTGCACTAGAATCTAATGTGCCTTAACCTTAGATG AAAAACTTGAACAAGATATGGTTCATTAGGATCTAATATGCCTTTACCTTATGTAACAGCTTGATTTGGACTTGCGACAG AACTCAAATACAACTACAACCTCCGAAGTGTCTGGGAAAGTTATCTATGGCCGCCCATCTCAGTTTATGGAGGCAGAGTG TCGTCCATCTAATTCAGTCTACCCAAAAATTGTCACACATGAGGTTCTTGATCACGATTCACTTGTTTACGCAGCAAATG CTTCTTCAAAAGCACAAGAGATTGGTAATCAAGAATCTACATTCATACTCCCGGATCTAAACTTGCCTGTGGAGGAGGAT TTCAGCATCAATGCCATGCATTGAATTAGCTAATAAATGATTAGATCAATAGTGATATTCTGCATACTGATAAGTTATTA AGTTAGACCAAGGTAATCTTACAATATTTCTAAGAGAGGACCACTAATAATACTTACTTTAACCCTCTCTTTGAAATATT TTTATTAGTTGAAATCCATATGGGTTCCACTAAATTGGGAATGAGGCTCTTGTAATTTAATGAATCCCATATGAAATTCA GCTAATAAAGGAGAAAAATGTTGAAAATGAAGTGTTAAAGTAAGGGTTGGTGGCATTTCTCATGCCTAATAAGGTATAGC ACCTCAATCCTAACAACTTAGGCTCTGCTAATGTAATTGTAGATGCTAAGCCATTCACTTTCCCACTTAGTCAAAACTAA TGTGGATTTTTTTTTTTTTTAATTCTTGATGACACTGAGGGTAGTGTAGAAATCTTAACATGTCAAGCTTAGTTCCATTT ATCTCTATTCACAGATTTCTACATTGTCCAAATTTCTTTCGGCAACCCCAATCCTCTTCTTTATCATAGAAATATTTACC GATTAATGTAATATTATGTGTTCTACAGATAATCCAAAAACTTTGGTTATTGTAGCGAGGTTTTCTACATCTTTCATGAT TTGTTTAATTGTTGATTCTCTTGAAATTTAAAAGCTTGTTATGTGCGTTGAAGGATTTATAGCTAGTGTACCCGAGCACG AGTCCTTCCATTTTTATATGATTCATA
CDS sequence (LotjaGi3g1v0005400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGACCACGATGACTGGGTCAACCTCGCCATGGCCGATGACTCCACCGTCGCCGGCCTCCTCCTCAACCTCCACCA CCGCCCTCATCCTCACCTCCACTGGACCGTCCGCCAGCGCCGCTCCACGCACAAAACCTCCCCCGCCACCACCAGGGCCA GCCCCACCACTCCCCTCTCCTGGAGCGGCGCCGCCACGTCAGTCAGCTGCGGCGCAAACAACGTCGATAGCCACGAGGAG GAGTCTAGCCACCTCACAAAACATGCCGGAGCATCAAGATCTGATAAGGTTGCTAATCCAAGTGAAACAGTCACTACTAA AAAGGCAAGAAGAAAAAAGACTTTAGCTGAATTAAAAGAGGAGGAGAGTTTGTTGTTGAAAGAAAGGAGAAATTTGAAAA ATGAACTGGCATCTTTGCGTATTACTGTTGACCAACAGATAGCCACAAATGAAAGCTTAAAGAAAATGAAGCTTGATTTG GACTTGCGACAGAACTCAAATACAACTACAACCTCCGAAGTGTCTGGGAAAGTTATCTATGGCCGCCCATCTCAGTTTAT GGAGGCAGAGTGTCGTCCATCTAATTCAGTCTACCCAAAAATTGTCACACATGAGGTTCTTGATCACGATTCACTTGTTT ACGCAGCAAATGCTTCTTCAAAAGCACAAGAGATTGGTAATCAAGAATCTACATTCATACTCCCGGATCTAAACTTGCCT GTGGAGGAGGATTTCAGCATCAATGCCATGCATTGA
Protein sequence (LotjaGi3g1v0005400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCDHDDWVNLAMADDSTVAGLLLNLHHRPHPHLHWTVRQRRSTHKTSPATTRASPTTPLSWSGAATSVSCGANNVDSHEE ESSHLTKHAGASRSDKVANPSETVTTKKARRKKTLAELKEEESLLLKERRNLKNELASLRITVDQQIATNESLKKMKLDL DLRQNSNTTTTSEVSGKVIYGRPSQFMEAECRPSNSVYPKIVTHEVLDHDSLVYAANASSKAQEIGNQESTFILPDLNLP VEEDFSINAMH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 247 | 245 | 4.4E-59 | – | |
| MobiDBLite | 38 | 111 | 74 | - | – | |
| MobiDBLite | 42 | 76 | 35 | - | – | |
| MobiDBLite | 77 | 91 | 15 | - | – | |
| Coils | 115 | 149 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0005400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…