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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0010800 |
| Transcript ID | LotjaGi3g1v0010800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metallothiol transferase fosB; TAIR: AT1G80160.3 Lactoylglutathione lyase / glyoxalase I family protein; Swiss-Prot: sp|A4IS40|FOSB_GEOTN Metallothiol transferase FosB; TrEMBL-Plants: tr|B9RV37|B9RV37_RICCO Lactoylglutathione lyase, putative; Found in the gene: LotjaGi3g1v0010800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1173222..1176155) extracted from Lotus japonicus Gifu genome v1.2.
AGTGGACTTCCCTATTTCTCTTTCTTTCATCTTCAATTTTCTCTCCTAACATTCTTCTTCCTCTCTTTTTATTTCTTCAT TCAAAGTTTTGATCATTTTTCAAACTTCTTCTTGTTTGTTTGAGATATTTTTGCTAGAAAAATGAAGGAAAGTGGGGGAA ATCCTCTGCGTCTAAAGTCTGTGAATCACATCTCCCTCATCTGCACTTCAGTGGAAGAATCTATGAACTTCTACCAGAAT GTTCTTGGATTTATCCCCATCAGGAGGCCAGGGTCATTTGATTTTGATGGAGCTTGGTAATTAATTATATTTAACCCCCC AATAAAAATTTTCAGTTGAACGAAACTAAGGTTGTGTAGAAGAAGCAAAAGGAGCATGAGAGGATTGAAACTTCCATCCA AATTTTCTGTTTTTGTTTTCCTGGGGAGAAAGTTTTGGTGGGTTTTTCTCACTGAATTAAAATTTATACAAAAAAAATCA TTTGAAACCATCCTATATAATTTTTCAATTGGAAAGAACGAAAACTGTGTAGAAGTGGCTTCTTTAGATTAAGAACACAT AAGGAGCATGGAAAGATATAAACTTTCATCTAAATTTTTCTGTTTTGTTTTCTTGGGGAGAAAATTTTTCTCACTGGAAT TTGGATTTTTTTTTTGTGTATGATTAATGTACAGGCTATTTGGCTATGGAATTGGAATTCACTTGCTGCAAGCAGAGGAC CCTGAGAATATTCCAAGGAAGACAGAGATTAATCCAAAGGATAATCACATATCATTTCAGGCAAGAGTTCCATATTCAAT TAGGGTGGTTGATATTTAAGTAAACTGCATGTTTAATGCTTGATTCAGTTCAAGGAAAGAGCCATATTAAAGATGTGAAT GGGTTAATTTAATGGTATTTGGCATTTTTCTAGTAGAACAATAAGGAAGCAATGGAAAACAGCAACGTGAGCAGAGAAAA AGTCAGAAATAAAAACAATTTAGCTAAGCTCAACCTTGCAAGTGATAATAAGAAAGAAAAGATAAGATCATAGATAAACA CAGGTTGATAATGCTACTTTAGCTTAGCTCAACTTTGCCAACAATTAATAAGTTCAATTAATGTGTTATTTTCTGGTTTC CTTTATGATTATGTGTATGTTTATATTTACGTTCAAGTTTACCAAAAACACACTGCAATTACACAAGAGACATGAACTCA TCAAAATTAAACTGTCTTAGAAACATACTAATAGTTCTTTGGCTTTGCAATGTTGATGTAGATCCTAAATAAAAGGCTAC AAGTTGGATGAAAACATAGCATTCAGCCCATGTTTGTAAAAAGACCAGAGATTGAAAATGAATGATTGCAGATAGAAAAA ATTGACCAAATTGCAAAAATGGATGAAATCATTATGCCTTTTAGTACTGTAAAATTTTGTATATTTGTGTCAAGATATGA TCACTTCCCCTGTCCCATTCCTGGCTTGTACGTGGAAAAAAGACAAAACTAATTTAATCGTGCAAGTGGTTTTTAACTTG TATGGAAGTACTTGTATGCTAGACAAGTGTTTTTATGAAATGACAAACTGATTGATTTAAATATGCATAATACAATAAGA CTAGCGTTTGATGAAAATGACAAAGTGAATGAATGCAGATAGAAAAATGTCACCAAATTGAAAAAATGGATGAAATCACT AAAGATTTGTTGCAAGTTGTGATCACTTACCCTGTCCCATTGCTGGCTTGTACATGGAAAAAAGACAACCAATTTCATCA TACAAATGTTTTTAATTAACATGAATGCATGTACTTGTTAGACAAGTGTTTTGATGAAATGATAAAGTGATTAATTTAAA TAAGCATATACAATAACCATATATTTCTTTAGAATGAATTCTGGGATCGGAAGCTACCTAGAGAAGCTTCTCCGATTCAA AATTGATTTTAACATTAGAATCAATTGTAGAAAGATTTTGAAACATGACATTGTGATTGTTGTGATGATGGAACAGTGTG AAAGCATGGGGGCAGTGGAGAAGAAGCTAAAGGAGATGGAAATCGGTTACGTGCGAGCCATGGTGGAGGAAGGTGGGATC CAAGTAGATCAGCTGTTTTTCCATGACCCAGATGGTTTCATGATTGAGATATGCAATTGTGATAGCCTCCCTGTAATTCC CTTAGCAGGTGAAATGGTGAGATCATGTTCAAGAGTGAACCTTGAGATGATGCAGCAGCAAATACACCAAGTTGTCAAGC AAATGTGAATGGTGATTCGGCCTTTCATCTAGTGTTTTAAAACTAAAACTGGTGACTGACTCGATCAAGACACCAGGTCA ATTAGTCTAAAAGGTACTGGGTGAAGAAGAAAGTGGGAAATTATATATATATATATATATATATATATATATATATATAT ATTATTTAGCTACTTGTCAGTGAGTTAGTATCTTCCTATGTATTATATTCCTTTTGCATCAATAAACAACTCCACACCTG CTAGTTCCTAATTTAAAAAAAAGCATTGTCCTTTTGCCACCATGTGTTTGTTTTTTTGTTCATTTCTTACATCATTTATC AAGTGGCTTTTTCTGAGTACACCAACATAGACATGCCATCAAGTGAAATGATTTTGTAACTACGGGCATATTTAGAAGGC TTAAATATGAAATATGTCTGAAAAAATCTTTAAAATATTATCTTAAGAATATTTTTATTCAAATTAAGGTTCAAGTGTGT TTTATGCTTATGTGTCATGAATTTGACCCAATCATCATATCCACGTGACTTTTACATATTCTAGTCATTACTTAGGGGTT TAGTTTGAATTCCACAATCAATTAAAAATCAACTTCCTCTTCCTCATAGACTCAACCGAGAAGCCCTAAGGAATTCAACA CCACCCAGTCGTCATCTTCCTCCCCTTCCTCTCTTCACCATATTCTTCCTACAA
CDS sequence (LotjaGi3g1v0010800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGAAAGTGGGGGAAATCCTCTGCGTCTAAAGTCTGTGAATCACATCTCCCTCATCTGCACTTCAGTGGAAGAATC TATGAACTTCTACCAGAATGTTCTTGGATTTATCCCCATCAGGAGGCCAGGGTCATTTGATTTTGATGGAGCTTGGCTAT TTGGCTATGGAATTGGAATTCACTTGCTGCAAGCAGAGGACCCTGAGAATATTCCAAGGAAGACAGAGATTAATCCAAAG GATAATCACATATCATTTCAGTGTGAAAGCATGGGGGCAGTGGAGAAGAAGCTAAAGGAGATGGAAATCGGTTACGTGCG AGCCATGGTGGAGGAAGGTGGGATCCAAGTAGATCAGCTGTTTTTCCATGACCCAGATGGTTTCATGATTGAGATATGCA ATTGTGATAGCCTCCCTGTAATTCCCTTAGCAGGTGAAATGGTGAGATCATGTTCAAGAGTGAACCTTGAGATGATGCAG CAGCAAATACACCAAGTTGTCAAGCAAATGTGA
Protein sequence (LotjaGi3g1v0010800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKESGGNPLRLKSVNHISLICTSVEESMNFYQNVLGFIPIRRPGSFDFDGAWLFGYGIGIHLLQAEDPENIPRKTEINPK DNHISFQCESMGAVEKKLKEMEIGYVRAMVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLAGEMVRSCSRVNLEMMQ QQIHQVVKQM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 2.8E-94 | – | |
| PANTHER | 1 | 167 | 167 | 2.8E-94 | – | |
| Gene3D | 7 | 137 | 131 | 9.2E-27 | ||
| SUPERFAMILY | 8 | 134 | 127 | 1.11E-22 | ||
| ProSiteProfiles | 13 | 135 | 123 | 17.747 | ||
| CDD | 14 | 132 | 119 | 9.28002E-43 | – | |
| Pfam | 14 | 132 | 119 | 1.6E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0010800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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