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LotjaGi3g1v0015200.1

Overview

Field Value
Gene ID LotjaGi3g1v0015200
Transcript ID LotjaGi3g1v0015200.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description WAT1-related protein; TAIR: AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q4PT23|WTR6_ARATH WAT1-related protein At1g25270; TrEMBL-Plants: tr|G7II58|G7II58_MEDTR WAT1-related protein; Found in the gene: LotjaGi3g1v0015200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:1607909..1616232) extracted from Lotus japonicus Gifu genome v1.2.

ACCGTGAACACCTCTACTTATACAACTCTTTCGTTTTATTCTGTCTTAGTCTATCCTAACCTTCAAATTGACTCTTATAT GAAAGATATATGTACAAAAGGCTGTGAAGATATAGATTTGTGCGAACAAATTGTTTTTTCTCTGTTTCTACTCATGTTCA CCTATTTTTGTTCTAATATATTTGGCAATATTTTATAAAGGATCCATAGTGTTGGACTTCGAATGCATAAGTTAGATTAT ATAGTTGTGTTAACATTAGGATTTGGACCAGAAATTTCTTCAAGGGGCATTGGCTGACTGACTTGTGACAGCCCATCATC TAATATCTCTTTCTCCTTTCTCCAACATATATAACCTTGAACAAATACTCTACCCCTTGTAGTTTCAAGAGAACGTTGTC TTCTTGCCTTCGCTAACGACCAGACGAAGAAAAGGCATTTTAAAATGATGAAAAGAAAACAAAATTCCCCACTTGATCAT ACATAATTGAATCCAGACTCATTTCATGAGCACCAACATATATATAGAGGTTTCAGCACCAAAAAAATTGTAGAACATGA ATATTGATCTCTAACACTAGCAAAGTAGAATTAATTTGGAAAATATAATCAGATCCTATATATAGCTAGCTAATATTGTT CATTCATCAACATGACATGCATTAGCAACAATATCATAGAAGGCTTTAAGCCTGCGTTTCTGATGGTGTTGGTTCGATTT TTGTATGCTGGGGTTAGCATCTTGTACAAATTGGTTGCAAATAATGGGATGAGTATGAGTGTTCTCTTGGCCTATCGTTA CCTCTTTTCATCAGCTTTCATGATTCCTCTTGCCTACTTTGCTGAAAGGTAACATTTTTAACTGTAGTAACTACTTTAAC AGTATCATATATAACATATATTTATTTGTTTTGAAAGAAAACTTCTTCCTTCCAAATGATGTTTCTAAATATGTTGCAGG AAGAGCAAGCCAAAGATCACAATGAAAGTGCTCTTTCAAGCATTTCTTTGTGGATTATTTGGGTAAGTTGAGCCGGTGTG TTTCACACAGCTTTTTTAACCATGGACCAAGGAAAACCTAGTTCACAAATTAAAATGACTTCCTTACAAATTAGTTTTAA CACATAAAAAACATATATATATATATATATATATATATATATATATATATATATTCTATATTTTCTTTTGTAATGAGGAT AAACATTGTTCACAAGTGAACATGCTTTTTAACATGAATCACTATAGATTTGTCTATATAATAACCAGAGCAAATTACAT TTCACTAGCTACCTTCAAATTTTGCTCATATGACACTAAACTTCATTCTGCTAATGTCATGAGTATAATGAAGTTTAGTG TCATATGAGCAACCTTAAAGGTAGTGGAGTGTAATTCACTCTAACTATCACAATGATTAAAATGGAAAAGATGAGTTTGA TTACTATGTAGCAGTATAAAAATGTTTTACACAATCATCAGAGTAGAATTAATCAATTTATTATGTCATAATTAACATTG AATTTAAAAACATTTAAAATAGAAACTAGAAAATAAAGAGGTTTGATTAGACGCGTGAGTAATATTTTCTACACTATCGG TGCATATAAATGAAATCCTTTTGACATTGTGTCATTGCAACATCAGGGCAACCATACAAGAGAATTTGTTTGTGGAAGCA GTGACTTGGGCAGGTGCGACATATCCTAGTGCCATGTATAACCTCATTCCTGCTATTACCTATATCTTAGCCGTCTGTTT TGGGTAGGCCATGTATTCTTCTCTATATTTCAATTTTCAAGTGAATAGTCATTTAATCCCTGAAAGATATAAGGTAGGTA ACTTCCATCCCATGCTTAGGAAGTACGAAAAATAGGCTATGAAAGATTAAAATAAATTTCAATAGACTCTCAGATACTAA AATGAGTTGTTCTTTTTCATCTATAAAGGACTAAATTTGTCACTCTTTATCTTTCAGTGACTATTTTACTTATTTTCATC ATTGAGTGACTAAGTTGACTCGCCTCACACTTTTAAGAAATAAAATGACTATTCACTTCTTTATGCCGTACCCCCATCAA ACTCTTACTTTCATTTTACCAAATTATTACTATATCAAACCCTAACTTTCCCTAAGTTGTCTCATGCTATGGATCACTGA TATTAACTGTATTGTACTCATTTTTATTCTACTTATGATTTTCTCAGGTTGGAAAGATTGAACATTGAAACAAAAACTGG GAAGGCCAAGGTGGTTGGCACTTTGATAGGAATTAGTGGAGCCATGATACTCACCTTCTACAAGAGCATTGAGATTCACC TCTGGCCAACAATTGTGAACCAGAGTAAGCCCAAAGATGTGGCTACCGGTCATGTTTGGGGCACATCTCTTGCTTTCGGA ACTTGTATATCCTACTCTATATGGTTGATAATTCAGGTCACCTTCACTTCCTATATATAAACTGCAATAAGAAGTCTGAA TTAGCAAGAGAAAATTGTACATGTGCATAGATACTGTAAAGGTTTTTTACACTATCAACAAATCAGATTTCAAAGATATG AAAAAAAACACATTTTTTGTTATTTAATCTATTGGATTAATGTGACTGGTTGATGCGTCAAATAAAATTTAACTCATTAT AAATAGCAATATAGATATAACTTATTAGGCTAACACATATAACTCTTATACTATATTTCTAACTGGACTTGCAAGTTGCA ATCACATATATGTATGAGTTTATAACATTAATCATGTCTATTAATGCTATTTTGTGTGTGGTAGGCTAGGATGAGTGCCA AGTTTCCTTGGCATTATACAAGTGCAGCTTTGATGTCAGTGATGGCATGCATTCAATCAACTATATTTGCTCTAGGCATG GAAAGAGATAATTGGAGCCAATGGAAGCTTGGCTGGAACATCGAACTTCTCACTGCACTCTATACGGTAACATGCTTTAT AAATTTTTATTTTTGTCATTCATAGTTAAGGACAGTTCTATGGTTGACCAGGTTAAAAATTGGTTCACTTATGAACCATG TTTTTAAATTAACATGCAGTATATGTTATTGATAGAGAGAAATTTTCGATCAAGCAAGAACACTAGTTTCTAATCTAAGA GCTAAGCTAAAAGAAAGAGAGAAAAGCATTTGCATTTATTTTCTGGTGATCTCATTAAGCATGCAGAAAACAATTACAAT TTATAGTTAGGATAAAACCCTTAAACAGAGGAGAATCATACATACAAGTAGCAATCATCCAAATACTTGGAACACTCAAA AAATAAAGGATTTACAAAGGGAAAGGAGTCCACCCGGAACTGATGAACTCGTAATGAAAAAGTGAGTCAATGAAAACGGA TTTTTGGTTGGAAATGAGTTTGAAGAGATTGCTCTAGTAGAAAAATAACTAAACATGGAAAATAAAAATAACTAGACATA GTTATCCATCCACTTTGGGCCTAATATACCCAATTAATGATAACCCAACAATATAGGAGCTATCAAGTATTTACAACATG TTCCTTACGTGCTAAAACTAATTCGTAGAGAAGTTCTTCTAACTTATGAACCATGTTTTTATTGGTTGACATAGGCAAAG CTCATGTTTTAAGTACATAATTATTATACCTTTTCACTTGATGTGTGTTGTAGTTCCTTAAAACTAGATGGTAACCCCGC GCGGGCGGATGTTAATTTAGTAACATTTTAAATCTTGATGAACGTGTTGTATAATTTTAATTTATTAAATGCAATCATGC AATCTTTGAAATGTATATAGAATATGAGAAAAGTTTAACAATGAATGGACAAATGTTGATAAGATGAAAGGTAGTGAAGA TGTTCCTTTTGATGAAGTTAGTGATGAAGTTAGTGGAGGGAATCAAAAGGAACTAATTTGTGTTCATTATTATTGTTTGT GTGTTAGTTAAGCCAAATCAAGCACAAAAATTAACAACTTGTCATTAGCTTCTTAAGTAGTGAGCTCCAAGGAATTATAT ATATATATGCATTGTTAATGTGATAGAATAAGTACTTAAAATCACTTCTTTTTGTTCTTTTTGCTCCAAGGACTAAGTAG TGTCCCAAAGTTTCTAACTATGTTAAACAATCATTAGCTCTTAAGTAGTGAGCTCCAATGAATTATATATATATATATAT ATATATATATAAATATATAAACACACACACAATATGCATTGTTAACAACTTGTCTAAGTTCTGCAAAAAAAAAAAAAACA ACTTGTCTTAGTTGTGATAGAATAAGTACTTAAAATGACTTCTTTTTGTTCTTCATGTGATAAAAGGTCATTTCTTCCTA AATTAGGCACCTAATCTCTCTTTCTTTCTCTCTATATATATGTGTGTGTTAGAATTCACAAAAAGGGCATGCTTACAACT TTTTTATAATTATTTTCAATACTCGAATTAATTTTGAAAAGAAGCTCTGAGTGACATAATTAATTATGCATTGTTCATTT CTAGAATATTGACAGTTGTTTTTTTCCTTTCACATATGTTTATAGTTGATAACATTAATAATATCAACTAACAAAAAAAA AGTAGTCTAATCACATTCAATCTTCATATATAGGTATGTAGTTGTTGTAAATGGATGAAAAAAGAGCAAAATAGCATAAG CAGTTGTATGATCCACTCTAGTCTATTATGCACACGACACTCCTCAAAAGAGCTTCTTTCATAAAATTTCTTTTCTTTTT TTGAGTTTAATTAGATAAAGGGAACCTAAAAACTAATGTGAAGAATGAAGAAAAATCATGGTAGAGGAAACAAACAAACC TGTGAGTAGAACCTTCAACTATAACTTTTCCTTCAAAAATAAGGTCTTCATAATTTCTATAGGAGCAACTGAAAAATCCA AACAACACGCAACTGTTTGCTTGTTACAATTCACAATTGAATTTGTATCATAGAAAATAAATCATAACAGAAATTTATCT TCAGAGACGACAATGACCTTGCTAAGGGTGTTGTTGAAGTCCTTGATGTTCTGATTTTTGTAGGTTCGTAAGAGTAGAAA CATAATTCACGCCATTAACACATGATGCGTTTGACATTCTCCAAGTGGCTGCCACTTTTCAAATGGACCTCCATTTTTTT GTGTCCAATTGAATTATCATATCAAGGAAAAAATCTAGAGAGAAAATGATAATGTTTTGGGTACATCACTTGCCTTTAGT AATCTTTTATATGCTTTTAATCTTTACCCGTTTCTTTTCATTTATGTCATTAATTCAAGCGTTTCAAGTGGCTGAAGATG ATTTGCTGGCGCTGCCGCTCTTGAGAATTAGAATTAAATTAACATAAAAGTAGAAATGGAATCTTGAGAATTGAACGTAT AGAATAGAAATGAATGTCCCAAAAGAAGAATGACTGAGAATAGTTATAGAAGAAAATTAGTTTATGCTTAAACCGAAAGT CCAGTAACGTAAAGCAGTGGGTTGGGCATGTCAGGTGAAAAAATATGAAGTTAAGTAAAATGGAATAGAGAGAGAGAGAG AGGTGAGTGAAAGGGAATTGATACTTAAGACTTGAGAGGTGCAAAGGCTTCTTAATGCATAGAGTGTGACATGTCAGCAA AAATACATAGGTGGCAAGGTAAGAAGAGCTGAATTGTCATTCTAACAATGCGCGCTTCACAATTACTATATTATAATAGA TTGAGCCTACATCCTAAGTTTTCATAAATTTCAAGTAATTGACATGTGTATGATGGGTTAATTGATTTGTATCAGGGTGT TGTAGCCTCTGGGGTAGTTTGGGTTCTCATGGCGTGGTGTTTACGCTTAAAGGGACCACTTTATGCATCCGCTTTCAACC CCCTGCTCCTCGTTATAGTGGCCATTGCAGGTTCTCTGTTCTTAGAGGAAAAGCTCTATTTGGGAAGGTACAAGCATTAA CTAATATCATTAATTTGTTATGCTTTTTTTGTTATTAACTGTTATTTTTTTCTTCTAAATTACAGCATCATAGGATCAAT ATTGATTGTGCTTGGGCTATACATTGTCTTGTGGGGTAAAGGTAAAGAATTAAAGAGCCATATGGAGCAAAAGCATAAAA ATGACTCAGTTGAAGTTGAACCATTGGAGATAGTTACCACAAAGCAAATAGATGGTAAAAATGTTGATATTGATGGCAAT GACTTGAAGTGTGGTACTTCTTGATGGAAAATCATCATTAAAAACAATTGAAGAAAAGAAAAGAAACTGAAGGAAACAAA TATATCTCATCAGAGGAGACATATTTGATCAGGATTAAGTTATAAACTAAGACTTATACCCATTCTTTCGCGGTGGTTGA TGTTTATGGACTTATATATGGCATTCATCAATGGAACAAACAGTAGAAAATTGATGATTGAAGAAGGAAATTCCATTGCA AGACTTGTACTAGATCGTTATTGTGTCATTTGCCATAAATATTTTTTTATGAAAAATGTTAGATCATTAGTTTTGGGGAT AATTGGTTCATGAAATTCTACAACTTGCAACATCAAAACAAGAACGTGAGAAACACTATCCAACAACACTGACCTGCAAA TGCCAAGATGATAAACCGTGAGGGCGTCATGCAATCTTCCCTTGGATTCATAAAAACACACCGACCACACATAAAGTGAA GCATTGTTGGCACTTACATTTCTTTTCAGCACTTCTTTAAAAACAAAATCAGAACCAGAACTGACTCCCATCTGCATAGA AATACCAACAGAACCAAGTTAAGCTCATTCCAAAGTGCCTCAAAGAAGCAACATTCATCATCACATCCCAGCCTGCATAC CACTGCAACAACTTAATGGTATGTTCTGTAATATAGACTACTTGCCTAGCGCGGTCGGTGAGATTATTTAGACCCCATCT CAGATTCATAAAGGAATTTGCATTGAATTTGAGGGAAACAAATGGGGTATAATGGTCCCTACCTGTTTTCTAGAGCGGTT GGAAAACTTGGGAATAGGCCAGATTTCAACTTTAAAATCTTGCCCCTATATCCTTTTATCCAGAAGATTGGAAAAATTTA GGAAGTTCAAATCTCAACGTGAAGCGAAATAGATTGAAGGAAAAAACTGCTTCATCTTAGTTGTGTGAGGGAGACCTATA TGATTCATATATTTAACCAGACAGAGTAGTGGATAAATGATGGGAGAAGGAAGTGTCCTAGCAAGACTTGTATTAGATCA TTGTGTCATTTGCAACTCTCTATAGTTTTTAGGTAAAAACTGTACCAAGCTTTGAGTTTCATAAAGTTTTAAGTCACAGT TGGTGGTCTTAATTTGATTCTTGTTATTCTACTTCTTGTTTTGAAGTGTAAAGTGACTATGTAAGAAGCTGGCATGCTTG TTGTAAGATATGGTTAATTAATGTTTTAATTTGTGTAGAAGAAAACAATCTTGTCGATGCTTATGTGATTAATCATTATA TCTTCAGAAGTTTATGTTGAAGATTTCAAAGGTATAGTTTTTATTCATCAAAATCATTAGAACAGAGAGTCAAAATTCAA AGGCAATAAAATATATGAACCAAAGAAGAGACACTACACAAACAAAAGGTTCAAAATCAAAAGGAAGTGTCATCACCGAA AGATTAAATAAAATGAAAAAAAAAAGCTTCGCACTTTTGATCATCAACCCAGAACCAGTCTTATGTCAGTTATACTGATA GCTGTAACTTGTACACATATTTGCCTTCTGATTCTGCAACTCAATTCCTGCAATGCAAAAGAAAAATGTAACAAGAATAA TATACTTGTGATTGTTAGCTACTTAGCTAGTAAAACTTGTAATAACTTGCAGAAGAAGTTGAGTCACCTTCAATTACCTT CAATCTAAGCACATTGAGCCATTCAATCATTGTGTTGTACAAGGACAGTTGAGATTCCGGAGCTCATTGAGGCATTTGTC ACCGGAGCTGAGAAAACATATGGCGGCTCTCCGGCGTGATTGACATCGGAAACTCCGAAAGAGTGAGAGAAGAGAAGGTA AAGTTAGTGGACTTTGCTACTTATTGGGAATAAAATAATGTAAATAATTAATTATGGATATTTTTCTAAAATAATATTAA GGCACTTAATTCTCCATAATTAAGAAAAGTAGTTTTTTTAACATAATTAAGAAAAGTAGTTAGTTTAAAAAAGAGAAAAA TAGCTAGTAAGAATAAATTAGTAGTTCTTTTTAATGATTTTCTTAAATTATCGTCTTCGAAATTCTCTCTCATTCGTTCA TGATGTTCCATTATCTCTAAATGATACTGGTCTTGGAAATAAAGTAAATTTTTATAAAGTGGAAAAATTCTTGTAATGTT AAGT 

CDS sequence (LotjaGi3g1v0015200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACATGCATTAGCAACAATATCATAGAAGGCTTTAAGCCTGCGTTTCTGATGGTGTTGGTTCGATTTTTGTATGCTGG GGTTAGCATCTTGTACAAATTGGTTGCAAATAATGGGATGAGTATGAGTGTTCTCTTGGCCTATCGTTACCTCTTTTCAT CAGCTTTCATGATTCCTCTTGCCTACTTTGCTGAAAGGAAGAGCAAGCCAAAGATCACAATGAAAGTGCTCTTTCAAGCA TTTCTTTGTGGATTATTTGGGGCAACCATACAAGAGAATTTGTTTGTGGAAGCAGTGACTTGGGCAGGTGCGACATATCC TAGTGCCATGTATAACCTCATTCCTGCTATTACCTATATCTTAGCCGTCTGTTTTGGGTTGGAAAGATTGAACATTGAAA CAAAAACTGGGAAGGCCAAGGTGGTTGGCACTTTGATAGGAATTAGTGGAGCCATGATACTCACCTTCTACAAGAGCATT GAGATTCACCTCTGGCCAACAATTGTGAACCAGAGTAAGCCCAAAGATGTGGCTACCGGTCATGTTTGGGGCACATCTCT TGCTTTCGGAACTTGTATATCCTACTCTATATGGTTGATAATTCAGGCTAGGATGAGTGCCAAGTTTCCTTGGCATTATA CAAGTGCAGCTTTGATGTCAGTGATGGCATGCATTCAATCAACTATATTTGCTCTAGGCATGGAAAGAGATAATTGGAGC CAATGGAAGCTTGGCTGGAACATCGAACTTCTCACTGCACTCTATACGGGTGTTGTAGCCTCTGGGGTAGTTTGGGTTCT CATGGCGTGGTGTTTACGCTTAAAGGGACCACTTTATGCATCCGCTTTCAACCCCCTGCTCCTCGTTATAGTGGCCATTG CAGGTTCTCTGTTCTTAGAGGAAAAGCTCTATTTGGGAAGCATCATAGGATCAATATTGATTGTGCTTGGGCTATACATT GTCTTGTGGGGTAAAGGTAAAGAATTAAAGAGCCATATGGAGCAAAAGCATAAAAATGACTCAGTTGAAGTTGAACCATT GGAGATAGTTACCACAAAGCAAATAGATGGTAAAAATGTTGATATTGATGGCAATGACTTGAAGTGTGGTACTTCTTGA 

Protein sequence (LotjaGi3g1v0015200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTCISNNIIEGFKPAFLMVLVRFLYAGVSILYKLVANNGMSMSVLLAYRYLFSSAFMIPLAYFAERKSKPKITMKVLFQA FLCGLFGATIQENLFVEAVTWAGATYPSAMYNLIPAITYILAVCFGLERLNIETKTGKAKVVGTLIGISGAMILTFYKSI EIHLWPTIVNQSKPKDVATGHVWGTSLAFGTCISYSIWLIIQARMSAKFPWHYTSAALMSVMACIQSTIFALGMERDNWS QWKLGWNIELLTALYTGVVASGVVWVLMAWCLRLKGPLYASAFNPLLLVIVAIAGSLFLEEKLYLGSIIGSILIVLGLYI VLWGKGKELKSHMEQKHKNDSVEVEPLEIVTTKQIDGKNVDIDGNDLKCGTS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 14 14 -
PANTHER 11 338 328 6.3E-142
PANTHER 11 338 328 6.3E-142
TMHMM 13 35 23 -
Pfam 14 155 142 8.4E-11
Phobius 15 35 21 -
Phobius 36 46 11 -
TMHMM 45 64 20 -
Phobius 47 64 18 -
SUPERFAMILY 48 157 110 1.83E-6
Phobius 65 75 11 -
Phobius 76 96 21 -
TMHMM 76 95 20 -
Phobius 97 107 11 -
TMHMM 105 127 23 -
Phobius 108 127 20 -
Phobius 128 138 11 -
TMHMM 139 157 19 -
Phobius 139 160 22 -
Phobius 161 179 19 -
TMHMM 177 199 23 -
Phobius 180 201 22 -
Pfam 183 322 140 5.7E-14
Phobius 202 212 11 -
TMHMM 211 233 23 -
Phobius 213 233 21 -
SUPERFAMILY 222 326 105 1.96E-10
Phobius 234 252 19 -
TMHMM 248 270 23 -
Phobius 253 272 20 -
Phobius 273 278 6 -
TMHMM 277 299 23 -
Phobius 279 298 20 -
Phobius 299 303 5 -
Phobius 304 323 20 -
TMHMM 304 323 20 -
Phobius 324 372 49 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Molecular function Transmembrane transporter activity Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0015200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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