Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0020600 |
| Transcript ID | LotjaGi3g1v0020600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine-zipper protein; TAIR: AT1G52150.3 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q9ZU11|ATB15_ARATH Homeobox-leucine zipper protein ATHB-15; TrEMBL-Plants: tr|G7II12|G7II12_MEDTR Class III HD-Zip protein CNA1; Found in the gene: LotjaGi3g1v0020600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2112819..2118856) extracted from Lotus japonicus Gifu genome v1.2.
ATGAACAAACTGCTGATGGAGGAGAATGATAGGTTGCAGAAGCAGGTGTCTCATTTGGTGTATGAAAATGGCTACTTTCG TCAACATACCCAAAATGTATGGATTTTACTTATTTGTTTCTATTTTTTCAACTTGGTTGGTTTTAGTAGTTAGGTAATTT TGTAATCTACTGGGTCCTATTCTGAAAGTTTCCTTGTTTATGGTCTTAGAAGATTTATTTCTCTATTTTTAGCAACTTTA GGAACTCTATGGTTCTGCCCTTATTTATTCATTAATGAGTGCATTAGAATTGAGTTACAATGGTGCTATCTTTCTTTGCA GACTACGCTTGCAACCAAAGACACGAGCTGTGAATCAGCCGTTACTAGTGGTCAACGCAGTTTGGCAACCCAGCATCCCC CTAGGGATGCAAGTCCTGCAGGGTTAGTAGGAATATGATTGTTGGTTCCTTTCCATCATTTTTTTTCGTTGAAACCTTTT ATGTGTATGCTTGGCCTAATGAAATCGCGTGTTGTTTTTCCCAGGCTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTT TCTTTCGAAGGCTACTGGAACCGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGGTAATCCAATAACTCTTTTGTATTT GTTGATTAATTAGTTGCTTTATTCTTCAATTTCATTTTCATTGGGATATGGCATGAACTGAATGGTTAAACATGGATCAA ATTTACATCTTTAAATAACACACCCCAACAGGTGATAGCTTTCTTTATTATTAAGGGTTTGTGTTCTATTCGCAGCGTGC TAGCTTGAACAGTCATTTTTAAAATATAATTTTTTTTCATTAATTCTTGCTTATTTGCGCAGCCTGGTCCGGAATCTATT GGTATTGTTGCAATTTCTCATGGTTGCTCTGGTGTAGCAGCCAGAGCATGTGGTCTGGTGGGCCTAGAACCTACAAGGGT TAGTTCTCTGAATTTATTGTCTCTTTATAAATTGCGTTGCTTGTATTTATGGATGGCATGATCAACCATAATCTTTGCAG GTTGCTGAAATCCTTAAAGATAGGCCTTCCTGGTATCGTGATTGCCGAGCAGTTGATGTTTTGAATGTACTTCCCACAGC TAATGGTGGAACCATAGAGCTTCTTTATATGCAGGTAAAGAAAACTGTGTGTATTAATGATGATTCTGTTAATTCACGGG TAAATTTCTCATGTGTTTGAATGATGATTCTTTGCAACTTCACACACTAAATCTCTTATTTGCACACTTCACTCTATGAT GATCAGCTATATGCGCCCACCACACTGGCACCTGCTCGGGACTTCTGGTTACTGCGCTACACATCTGGTTTAGAAGATGG AAGCCTTGTGGTAAGAGACTCTAAATAATCCTCAAGTTCTGTATTTGAGTAGATATTGTAGTTAGCAGCAGGATCTTGTG TGTGCAATGCCAGGCTCCATTTATATATTACAGTCTTATTTTCGATTACAAAGTACTCCTTTTCCACAAGTACATGAGCA CGCACACATCATTCTTATAATGCTTCTCTGCTTCAGATCTGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCTAGCAT GCCTCCTGTGCAGCATTTTGCCAGAGCTGAGATGCTGCCCAGTGGGTACCTGATCAGACCTTGTGAAGGGGGTGGTTCCA TCATCCACATTGTTGATCATATGGATTTGGAGGTACATGGATTCAACTTTGTTGCAATAATATTTTTGTTTTAACAAAAA TCAACTAAAGCATGCTCGTGTCATTGTTTAGCCATGGAGTGTTCCTGAAGTACTGCGTCCACTGTATGAGTCGTCAACAG TGCTGGCTCAAAAGACAACTATGGTGGTATGGTATTTTTGTATTTAGTACGGCAATGTGTTTTTTCCCAATGCGATTTAA AATGAATCTAGTTTAAATGCTGCACAGTATCATATTAATGAGGAGCTAAAATATATATGTTTGGGGATCACCAAAGGCTG TGGTTTCTTTAAATCTTTCTCCTTTTTATCCAGGCCCTACGTCATTTAAGGCAGATCTCACATGAAGTTTCTCAGTCTAA TGTCACTGGGTGGGGCAGACGACCCGCAGCTCTTCGAGCACTTGGCCATAGACTGAGCCGGTTAATATTTTAACTTAGGC ATATTTTTTGTTGAATTTCATTGCATCTTATTCTTAATTTTCTTCCGACATTCTTTTTGTTGAATTTCATTGCATCTAAA TTTACTTTAGGCATATTTTTTTGTTGAATTTCATCGTATCTAAATTTCGAATCCCACGTCTATATCCTGGCAGGGGTTTC AACGAGGCACTCAATGGATTCACTGATGAGGGATGGTCAATGATTGGCAATGATGGTGTTGATGATGTTACAATTCTTGT GAATTCATCACCAGATAAGTTACTGGGTCTGAACCTTTCCTTTCCCAATGGATTTCCACCTGTCAGTAATGCAGTCTTAT GTGCCAAAGCTTCTATGTTATTACAGGTTAGGATGCTTTAAAAGTTCACTTATTTTCCTTAAGATTAAATAAAATAAATT ATCGAGTTAGAAATTATGCATTTAATCGCTGTAGATGATTTTAGTCAAAGATAGAGGTCATTTAAACCAATAGTTCATAA TGTTCACTGCATATTCTGGTTCTGTATGAGTAGTTAAGCTCATGTTTAATTGAAAAAAAATCATGGAATTCAAATGATCC TGACATTAATGACTACCAATTGCTTATTAGTTATTTCACAATATATTGCTCCTATCAAATGGGATTATGATATTGAACAT GTAAGGACTTGTTTGACCAGACATTGACCTTTCGAATCTGCAATTACTGAATGTGCCTTATTTGATATAAGTAATTATTT GGATATTTTCTGTCCTTTTACAGTCCTAATGTTCTCCTTAACATAAGCATGGCTTAGACCTGTTGCCAATTTTAGTTTTA ACATTGGTGTTATATTTTTCTTATTAGCTTATGCCATTTCTTTTCACAGAATGTGCCTCCAGCCATTCTACTAAGGTTCC TGCGGGAGCATAGATCAGAATGGGCAGACAACAACATGGATGCCTACTCAGCTGCTGCAATTAAAGTTGGTCCTTGCAGC TTATCAGGATCTCGGGTTGGAAATTATGGTGGTCAAGTTATTCTTCCTCTAGCCCACACTATCGAGCACGAGGAGGTAGA AGTTGGTGCTAAATACTTACAGAAATATGACTGATTTAAATATTTAATGATTAAGTAGGTTCTGACATTTTGCTTATCTA TCCTAGTTTCTGGAAGTCATTAAATTGGAAGGAGTCGCTCATTCTCCTGAAGACCCGATGATGCCCAGAGAAGTGTTTCT TTTGCAGGTAAGTTTTTCCCCTTTTGTTGCTTCCTGCCTTCCTCTATTTGTTACTCTCAGATGGTACTTGATATGCTTGA TGCGGTGCTAATATGTTGAAACAGACTTTTAAGCTGTTTGACTTTGATGTACTACTCTTATCACTTAGGTTTATATTTCT CACTTCCACAAATTTTCTGTTCATATAATTTTGAGTTATTTAAAGAATTAATCATCCTGTGAAGTTGCTGCCATCCTATT GCATGCCTATGTTCTTTAAGTTTCATGCCATGTTAAACTTAGTGTAATGTTGGTTCACATGGTCCTATATTGGGAGGAAG ACAAAATTATGAACAATCTCTTTGCTTACTTTCTTGTTTCTATATCTATGACGAGGAATAAGTAATATATTTCCTGGTCT TGAAATTTTTTGATAGACAAAAATACCTCGCTAGTATAGCTAAGTATCACTGATCTCCTGCAGCTGCTAGAATGATACTC TTGCCAACCATCACTTTGGTTTTTATCATATCATTGTTTGTGGTTCACTTTCTTATAGTTCATTTGATTTGTTTTGATAG CTCTGCAGTGGAATGGATGAGAATGCTGTTGGCACCTGTGCTGAACTTATATTTGCTCCAATTGATGCATCTTTTGCTGA TGATGCCCCCCTTCTGCCTTCTGGATTTCGCATCATCCCTCTTGAATCTGGAAAGGTTGATCTTTAGTCATTGTTGAAGC AGTATATTTTGTTTGAACTTGGTATTTACCTTTCCACAAGGTTGTCTTCTTATTATTTCTATGATTTTTGCAGGAAGCGT CCAACCCAAATCGTACCCTTGACCTGGCATCTGCCCTTGACGTTGGCCCTGCTGGAACCAGAGCATCAAATGATTCATCT GGAAATTCTGGCTGTATGAGATCAGTGATGACAATAGCATTTGAATTTGCTTTTGAAAGTCATATGCAAGAGCATGTAGC ATCCATGGCCCGGCAATATGTTCGTAGTATCATATCATCTGTCCAAAGGGTAGCACTAGCACTCTCACCATCTCATTTAA GTTCACAAGCTGGGCTTAGGGCACCACTGGGTACACCTGAAGCGCAAACACTTGCTCGTTGGATCAGCAACAGTTATAGG TATATATGTACTTTTTTCTTTCTTGCTAGTTGCCTTTAGTTATAGGTCTATAACATTTAAAGGTATATAACACTTGTAAC TTATAGGTATACAACTGAAGTTAGTGTAGTGTCGTGTATGTAGCATAAACATTATGATACTGCATGGTGATGTCCCATTG GCAAGTGAAACAATTGTTTTTCAAGGTTGTATTTGGGATGAGAAATCAGTTTCATATTTAATCATATTCAAACAAATTAT AAAAAGTAGCAGCTCTTGAAGTTGATGAATGGTTAGATAAGTTGCATACCCATATGTAATGATGTTTCTTTTTATCTCAG TGCCAGCTCTTGTCCTCCAATACTCCGGCGTACTTGTTTTCTGCTTATTAGAAAAAGTATTATTGAATAGAACTTTCCAG TAACAGATGCTGAGTTCTGTAAAATGTAAATAGACTCATGGGAACAAATCTTGACACTGTTGTATTTCTAACTGCCATCA GCTATTCCACTATTGTTTATCAATGTATCTTTATTTCTAATCTGTTATCAGATAATCCAACAAAGATAAGTTGCAGACAC ACTTTTAGTGAAATTTCTGGCATTGACTGATATGAAGTTGTTTGACTGTCTTAATTTTGTAGATGCTACTTGGGTGTTGA GCTACTTAAATCTAACAATGAGGGGAACGAATCTTTGCTCAAATCCTTATGGCATCATTCAGATGCAATCTTGTGCTGCA CTCTAAAGGTATGCCCAACATTGATTCAATTTACATACTAGATGCATTTCTCATTGTGATTGAGCTTCCCCGATGTAAAA AAAAAAACAATGAAACAAGGAAAATATTTTGCTGAGACTAGTAGTTATTGGGAAAGGGCTCACAGGATGTTCAGCATTAT CTTGAGTTATGGTGAATTTGGTAGATTTTATTCTGTCTTTTACCTTCAAAGTATTAACTCATTTCTGCCTTAAGAGGAGT TATAGCTCTGGTTTGCAAGTTAATTATTGATACTTCTGATTACTGAACTACTCTACTACTAGTTTAAAAGCACCTTCATG ACACTCGGTTTTTGCAGGCATTGCCAGTGTTCACTTTCGCCAACCAGGCAGGGCTTGATATGCTGGAGACTACTTTAGTT GCTCTTCAAGATATAACATTGGAGAAAATATTTGATGATCAGGGCCGCAAGATTCTGTGCTCAGAGTTTCCTCAAATTAT TCAACAGGTCTACTCTCAGGGAATTGATTTTGCATTCAATTGTAGACGACTTGAAGAATTTTCAAACATGCGCACAATCT TTTATAACTGGATGGATTTGTTCCTTTCTCTCATATCTTCCCCCTAGAACTGGGGCTTAAAATAGAACTTGCATCACTTT CAAGCTTTATTGTGCTTTTTATTGATTTTTCTTCATTCTATCTTTTGATAGGGGTTTGCATGCCTTCAAGGTGGTCTTTG TCTCTCAAGCATGGGGAGACCTATCTCATATGAAAGAGTGGTGGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATT GCATTTGTTTTATGTTTGTGAACTGGTCTTTTGTTTGA
CDS sequence (LotjaGi3g1v0020600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAAACTGCTGATGGAGGAGAATGATAGGTTGCAGAAGCAGGTGTCTCATTTGGTGTATGAAAATGGCTACTTTCG TCAACATACCCAAAATACTACGCTTGCAACCAAAGACACGAGCTGTGAATCAGCCGTTACTAGTGGTCAACGCAGTTTGG CAACCCAGCATCCCCCTAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTTTCTTTCG AAGGCTACTGGAACCGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGAATCTATTGGTATTGTTGCAAT TTCTCATGGTTGCTCTGGTGTAGCAGCCAGAGCATGTGGTCTGGTGGGCCTAGAACCTACAAGGGTTGCTGAAATCCTTA AAGATAGGCCTTCCTGGTATCGTGATTGCCGAGCAGTTGATGTTTTGAATGTACTTCCCACAGCTAATGGTGGAACCATA GAGCTTCTTTATATGCAGCTATATGCGCCCACCACACTGGCACCTGCTCGGGACTTCTGGTTACTGCGCTACACATCTGG TTTAGAAGATGGAAGCCTTGTGATCTGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCTAGCATGCCTCCTGTGCAGC ATTTTGCCAGAGCTGAGATGCTGCCCAGTGGGTACCTGATCAGACCTTGTGAAGGGGGTGGTTCCATCATCCACATTGTT GATCATATGGATTTGGAGCCATGGAGTGTTCCTGAAGTACTGCGTCCACTGTATGAGTCGTCAACAGTGCTGGCTCAAAA GACAACTATGGTGGCCCTACGTCATTTAAGGCAGATCTCACATGAAGTTTCTCAGTCTAATGTCACTGGGTGGGGCAGAC GACCCGCAGCTCTTCGAGCACTTGGCCATAGACTGAGCCGGGGTTTCAACGAGGCACTCAATGGATTCACTGATGAGGGA TGGTCAATGATTGGCAATGATGGTGTTGATGATGTTACAATTCTTGTGAATTCATCACCAGATAAGTTACTGGGTCTGAA CCTTTCCTTTCCCAATGGATTTCCACCTGTCAGTAATGCAGTCTTATGTGCCAAAGCTTCTATGTTATTACAGAATGTGC CTCCAGCCATTCTACTAAGGTTCCTGCGGGAGCATAGATCAGAATGGGCAGACAACAACATGGATGCCTACTCAGCTGCT GCAATTAAAGTTGGTCCTTGCAGCTTATCAGGATCTCGGGTTGGAAATTATGGTGGTCAAGTTATTCTTCCTCTAGCCCA CACTATCGAGCACGAGGAGTTTCTGGAAGTCATTAAATTGGAAGGAGTCGCTCATTCTCCTGAAGACCCGATGATGCCCA GAGAAGTGTTTCTTTTGCAGCTCTGCAGTGGAATGGATGAGAATGCTGTTGGCACCTGTGCTGAACTTATATTTGCTCCA ATTGATGCATCTTTTGCTGATGATGCCCCCCTTCTGCCTTCTGGATTTCGCATCATCCCTCTTGAATCTGGAAAGATGAT TTTTGCAGGAAGCGTCCAACCCAAATCGTACCCTTGA
Protein sequence (LotjaGi3g1v0020600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKLLMEENDRLQKQVSHLVYENGYFRQHTQNTTLATKDTSCESAVTSGQRSLATQHPPRDASPAGLLSIAEETLAEFLS KATGTAVEWVQMPGMKPGPESIGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDVLNVLPTANGGTI ELLYMQLYAPTTLAPARDFWLLRYTSGLEDGSLVICERSLKNTQNGPSMPPVQHFARAEMLPSGYLIRPCEGGGSIIHIV DHMDLEPWSVPEVLRPLYESSTVLAQKTTMVALRHLRQISHEVSQSNVTGWGRRPAALRALGHRLSRGFNEALNGFTDEG WSMIGNDGVDDVTILVNSSPDKLLGLNLSFPNGFPPVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAA AIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGVAHSPEDPMMPREVFLLQLCSGMDENAVGTCAELIFAP IDASFADDAPLLPSGFRIIPLESGKMIFAGSVQPKSYP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 506 | 506 | 0.0 | – | |
| PANTHER | 1 | 506 | 506 | 0.0 | – | |
| ProSiteProfiles | 60 | 261 | 202 | 24.824 | ||
| CDD | 64 | 279 | 216 | 1.19719E-81 | – | |
| SUPERFAMILY | 69 | 279 | 211 | 1.92E-36 | – | |
| SMART | 69 | 279 | 211 | 2.1E-40 | ||
| Pfam | 70 | 278 | 209 | 3.6E-53 | ||
| Gene3D | 104 | 285 | 182 | 4.2E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi3g1v0020600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…