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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0021500 |
| Transcript ID | LotjaGi3g1v0021500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT1G48120.1 serine/threonine-protein phosphatase 7 long form-like protein; Swiss-Prot: sp|Q9LNG5|PPP7L_ARATH Serine/threonine-protein phosphatase 7 long form homolog; TrEMBL-Plants: tr|A0A0S3ST28|A0A0S3ST28_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2252977..2255414) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTATGTTACTGAATACCACACAGCCCCACTCCACAACACCTAAGAAGAAGCTTGAGTTAACCACATCGAATCTCAGC GAGTTCCGGCCTCGTACCCTCGTAGTACAGTTTTCATCTTTAATTTTTTGCTTCGTGCCTGCTCTCCATCCACCGTGAGT ATATTGTTTACTCTGTCTCTGTTCACCTTTGCTCCTTTCATTGATGTTAATCAAGTTGCTGCTTCTTTACTATTTAGCTT ATGTATATAAAAGGAAACCTCCTTGCCTTATTATTTCACCAAATTAAACAAATTATTTTTGAAAGAATTGGGATTTGAAA GAATTGGAATACTTTTATATTGCACCATAGAAGATTTATCATAAAAAAAGAAAAAGAAAATTGAGTTAAAGTTGTATTAA TAATGATTACTGTATAGCCTTTGAAGTTTTATTAATTACTTCAAAACTACCTCTCCAAATTCATGGTTGTATTGGAAATG TTGGTTTAATTACTTTGTTGTCCTTTTAGGTTTGGGAACACTGCGTATTTATTCATTTCTGTGTCTCAAAGCTTAAAGAT TTTTTTTATTTTTGCAATTACAGCCATTGGGTGATGATTGAGTGAGTGAGTGAGGCTTAATTCTTAACTTACTATTTTCT ACTTTAACTTTTGATGATCTAAAATGATAATATCTGAAGATGTTTAAATGTAGTTGTTTTTATATTTTGGTTGGGTGGAA AAGTAAAAACCTCTTCCTTTATTGATTCAGTTGGAGAAATGGACTTCTTGCAATCTGGACCAGTTGATACCTCATTGTTG TGCCATCAGGAAGAGCATATTTCAAATGAAATTTGGAAACATGATGATTATGTAAGGATGCTTAGAGCGAGACATCGATG GCACGTGGTTACTCTAGATCTCTTGGACCATCGTGTAAAGGATGAAATAGTTAAGGCTGGTTTTGGTCCGATCATCTCAA TAAATGATGTCACTATTGATCAACAACTAGTAAATGCACTTGTGGAGCGTTGGAGAAGAGAGACCCACACATTCCATTTT CCTTATGGTGAGGCTACAATAACATTACAAGACGTCTTGTTGCAACTTGGGCTTCCCATTGATGGAGATGCCGTCACTGG TAGTAGTTCTAATGAGTGGGGGCCAACTTGTTTACGATTATTGGGAGATAGTCCCCCATTTAATCAATTAAAGGGAAGTA TGGTAAAACTAACTTGGCTTGAAACCCTTATCCAGAAACTTCCTTCTACTAACTACGTGCCACAAAGTGTAATTGAACAA CATGCTAGAGCCCACATCATGTTGTTAATGGGGAATATTTTATTTGTTGAATCATCTGGGCAGTCTATTCATTTGATGTA TCTTTTGTTGTTGGACAACTTACCGGCTGCAAAAAATTATAGTTGGGGTGCAGCTGTTTTGGCTTGCTTGTACAGTGCTT TGGACCGAGCAACAAATCCTAACCAGAGAAACATTGGAGGATGCATGTTGCTTCTCCAATCATGGGCATATAGTCGCCTT CAATGCATTGCACCCACTATAAATTCCATTTTTGTAAACAGGGTGGAGCAAGGAGTTGGCTTCCCTCTTGCACAAAGGTA TATCTCATGTCTGAGGACATTTTAAATTATAAATTATATGTAAAATGATAACTTTGCCACTCATACACTTTTTGTAATAT CAGATGGTCTTGTCCGAAGAAGAGCACAACAATCCCAATCCATAGTGCAACAAATGTCATACGGAAAAAATTTGACGGGT TGGGTATAGATGATGTTAGTACTTCCAATTACATAAGTCTAAAGCAAGTTTTTTATATTTATCTATATACTCAATCTTGT ATAACTTTTGAAATAATTTCTCTTCAGTTTAAATGGACGCCTTATCCTTATGAAGAATTGAACATCAGGGGATTGATTGA TCATGTGGACATCCTCCCCAATGTTATTTATGCAATGGTGCCATTGATATGTTTTTCTACTGTGCAATGGCATCCGTTAG ATAGGGTCAAGCGACAATTTGGATGACGTCAATGCATTCCAAATGATCCACCTAATTTGGATGAATTTTGCAAAGATGAT TTACGGGGAAAACAAGATTATCATTGGCCTGATCATCATCACAAGTCGATTGCTCAGTGGGATGATAGATATAATCGATT GATTGATGGTGATCCATATTCCGGTACTTTAAATGAAAACTCTGAGTATATGAAATGGTATATACCCCGCACTCGGCGAT ATATATCACATGAGGCTGTAATTTTAAATGGCATGGTACATTTATCTTAAACATTGCACACACATAAAATTATTAGCCCC GCACTTACCATTTCTTAATGTTTTTGTAACATGTTACTAATTATTGTTACAGCATTCCTTCGTACATTTAATTCGAAATC ACTGTAAATCACCTGATTCTATTAAGAATTATTGTGAT
CDS sequence (LotjaGi3g1v0021500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTTCTTGCAATCTGGACCAGTTGATACCTCATTGTTGTGCCATCAGGAAGAGCATATTTCAAATGAAATTTGGAA ACATGATGATTATGTAAGGATGCTTAGAGCGAGACATCGATGGCACGTGGTTACTCTAGATCTCTTGGACCATCGTGTAA AGGATGAAATAGTTAAGGCTGGTTTTGGTCCGATCATCTCAATAAATGATGTCACTATTGATCAACAACTAGTAAATGCA CTTGTGGAGCGTTGGAGAAGAGAGACCCACACATTCCATTTTCCTTATGGTGAGGCTACAATAACATTACAAGACGTCTT GTTGCAACTTGGGCTTCCCATTGATGGAGATGCCGTCACTGGTAGTAGTTCTAATGAGTGGGGGCCAACTTGTTTACGAT TATTGGGAGATAGTCCCCCATTTAATCAATTAAAGGGAAGTATGGTAAAACTAACTTGGCTTGAAACCCTTATCCAGAAA CTTCCTTCTACTAACTACGTGCCACAAAGTGTAATTGAACAACATGCTAGAGCCCACATCATGTTGTTAATGGGGAATAT TTTATTTGTTGAATCATCTGGGCAGTCTATTCATTTGATGTATCTTTTGTTGTTGGACAACTTACCGGCTGCAAAAAATT ATAGTTGGGGTGCAGCTGTTTTGGCTTGCTTGTACAGTGCTTTGGACCGAGCAACAAATCCTAACCAGAGAAACATTGGA GGATGCATGTTGCTTCTCCAATCATGGGCATATAGTCGCCTTCAATGCATTGCACCCACTATAAATTCCATTTTTGTAAA CAGGGTGGAGCAAGGAGTTGGCTTCCCTCTTGCACAAAGATGGTCTTGTCCGAAGAAGAGCACAACAATCCCAATCCATA GTGCAACAAATGTCATACGGAAAAAATTTGACGGGTTGGGTATAGATGATTTTAAATGGACGCCTTATCCTTATGAAGAA TTGAACATCAGGGGATTGATTGATCATGTGGACATCCTCCCCAATGTTATTTATGCAATGGTGCCATTGATATGTTTTTC TACTGTGCAATGGCATCCGTTAGATAGGGTCAAGCGACAATTTGGATGA
Protein sequence (LotjaGi3g1v0021500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFLQSGPVDTSLLCHQEEHISNEIWKHDDYVRMLRARHRWHVVTLDLLDHRVKDEIVKAGFGPIISINDVTIDQQLVNA LVERWRRETHTFHFPYGEATITLQDVLLQLGLPIDGDAVTGSSSNEWGPTCLRLLGDSPPFNQLKGSMVKLTWLETLIQK LPSTNYVPQSVIEQHARAHIMLLMGNILFVESSGQSIHLMYLLLLDNLPAAKNYSWGAAVLACLYSALDRATNPNQRNIG GCMLLLQSWAYSRLQCIAPTINSIFVNRVEQGVGFPLAQRWSCPKKSTTIPIHSATNVIRKKFDGLGIDDFKWTPYPYEE LNIRGLIDHVDILPNVIYAMVPLICFSTVQWHPLDRVKRQFG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 362 | 357 | 7.3E-74 | – | |
| PANTHER | 6 | 362 | 357 | 7.3E-74 | – | |
| Pfam | 63 | 362 | 300 | 1.7E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0021500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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