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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0024700 |
| Transcript ID | LotjaGi3g1v0024700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FLX-like 1; TAIR: AT1G55170.1 DNA double-strand break repair protein; Swiss-Prot: sp|Q9C717|FLXL3_ARATH Protein FLX-like 3; TrEMBL-Plants: tr|I3SIR2|I3SIR2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0024700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2717492..2725108) extracted from Lotus japonicus Gifu genome v1.2.
CTCCTTTCCTTACTAACCAGTCCGTCGGGGTATTGCACTCCCTGCTAACGAGCACCAGCGAAATTTTCCAGTCCTTGTTC ATGAGCTCTTTGATATCAACAAGAATTGGTAGAAACTAGCGACTCTCCTCATCCTCTTGTGATCGCAGAAGATCTCGACA GTCACATTGCATATCACATCGCGGAACTCACGCTCCCACACCATTTTCTAGTTATTTTTTTTATATCTCTTTCAACATTT TCTATCACATTATTCATCATATAACTATCTATCTCTCTTCTTTTTCTATCTCACCATTAATATATGATATATTGATATGA GTAAAAGAGGGAAGTGTGAAATTGTAAATGATCCATAACTCTTCTTCCTTTTGGGTTATTGTCTTGTTTGGGGCCCTATG CTCTTGACCCAAATGTTTGTTAAACAAAAATTTTATATCATCGTATTACATTCACGAGTTGGATTCCATATCGATATCAA ACCCGTGGGTTCATTCTGAGTTTTCTGTATTGGTGCATCATCCTCACGCGACTGCTACCAGACCCTTGTTCTCAATTCTC TTTCTGTAAGGTACCCTATTCATTCTCTTCATCTGTTAATCCCTATCTAGGTTTTAGTTTCGTTCTCAAACATTGATTTC ATTCAATATCTGTCTGTGATTTATTTTTCTTCTGATTTTTTTGGGGGCTTTTGCTTGATGTGCTTCGTGTGCCATTCTCA TCTTGTGATCATGTGCGTTGCCACCACCAATCCGATAAAGTTTTTTTTTTTTTTTTGGGATTCTGCATAACCCGTTTTGA AAAGGGGTTAATTATGATTATGACTCGCATTGCTGATCATAATTTGACATACCCTTTTGCTAATGATGCCTAAATTTTGA ATCTTTGGTTGAAATAACAACATGGTCATAATTTTGATTCTGATTGTAATGGTATTTTTATCTGATTTTGCTGTTTTAGG TGACTTGAAATGGCAGGAAGGCACCGTGGTCACAGGGAACCGATGAGTGGCCGGAGGGGTTACCCACCTGAAGGGCCTTA TACTCGTGGGCCGCCACCGATGCCACGACCGCATGTTCCCCCTCATCCGGCGCTGTTGGAAGAAGAGCTTGAATTGCAGC GTGCTGATATGAGGAATCTTGCGGCGGAAAACAGGAGGCTTGTGGTGGAAAACAGGAACCTGAATGATGACAGGATGGCA TTGCAGAGGGAACTTGCAGCCGTCAAGGAGGATCTTCATCGCATGATTGGCAACATTCGCGCTGACCATGATCTGCAATT AAGGGAGATGGCCGAGAAAGGCATGAAGTTGGAGTCTGACCTTAGGGCAACCGAGCCCTTTAAGAATGAAGCTATACAGC TGCGGTCTGAGGTTAAGAAACTTACTAATACCAAACAGGAACTCACAGGGAAGGTTCAGACACTTACACAAGAAGTTTCA AGGTTACAAGCTGAAAATCAACAAATTCCGATGTTGAGGTCTGATTTGGATAACATGCACCAAGAGCTAATGCGTGCCAG GTGTGTGGCTCGATTGTTAATGGTGTTTCCGTTTTTCTATCTTCAAGCTCCTTTGTGATAGGTATTTCCACATTGGTTTG CTTAAACTGATGGTAAATGGTAATTACATTTTTTTTAGAACCATGGTGGATTATGAAAAGAAAGCAAATATGGATATCAT GGAACAGAGTCAGTCAATGCAGAAAAACTTGGTTTCCATGGCCCGGGAAGTTGAGAAATTGCGTGCTGAGCTTGCTAACG CTGATGGCAGACATTGGGGTGCTGGTATGACTTGTTTGTTATATTGTCCTTTGCAGAATTTATTATCCTCTAATAGATAA CTCACATAACTGGAATTGAATCCATATCTTGGATACTCTGAATAGCAGTACTTTGAGGGTGGTGGTATCTCCCAATTTCC AGAAGGTGCATGTGTAGGGGTATGCTAAAAGAACTAATGCAGCAGCATCAAATGATTTTCTGTTGTTGGATTATTGGATA TGGATGTGATATTGATAAGCCACCAATCTTGGGAATATCTTTGCATCATGACCTGAAACTGAAATCATGAATCATTTTTG AAAAGCCATCCTGACCCATTTAATTCCAATTTACCAAAATATTAGTCTTGTTCTTTAGTCTATTTTTTGTTTCATGTTTG CTTCTTTCATGAAGGTGGAACTTATGGAACAAAGTTTGGTAGCCCAGACGGGGGTTATACAGCGCCATATGCAGATGGGT ATGGTGTTCACCTGGTATGTGATTTACTTAATTTTTACAAATTTTAGATTTTGCACTCAATTTTCCAAACTTTCATTCAC TTTTTATATGCTGCTATGTAGGGTGCTGCAGAGAAAGGTTCTCTGTATGGGGCTAGTGCTGCTTCAAGGCCTGAGAAACC TCGCATGAATCGTCGTTGATGTTTGTGTAATTGATGATACTGATGAAGAAAGGCCGTCACTTTGGCTGTGTCTGAGGGAT AGCTGACATTGGGTTTGATGTCCTTCTGTGTGTGCATGCCACATGCATGGCCATATTATCTGGAATTCTGGATATATTGT TAGTTCTAAACTGGCATATGTAGGTTTTATTATTGCTTTACTTTTTCGTAAAAAAACATTGCTGCATTATCTTTATGTTT GAAACTTAGTATGTTGGAACCCTTCAATTATTTTTCATTGATACATATTTCGGGTTTCATATTATTATTTTTGTGTTTTT TGGTTGGTTATTGTTATAAGCATTTATTCTGGGTAAAAATATGTTTTCTATTGGTCATGAGCTGGAGTGCAGAACTGCAA CATTGAGGTTTTGTAACCCTGATGTGTCAAATCATGTGGGCTGAAGTTCAACATATGATGGTTTTGTTGGGCTAGCTATA TTAGAAGACTCCATATAGATAATTCACTCCTATTCTGAGTGGTGCTGTAGAATGCATTTTATGTCAAGTATTATAATGTG ATTTCCGAATTACTCCTATGTAGTGGATAATGGTTAATGTGCCAGAGGAGTCACCACATGTAGAGGAAATACGTTGTACT TTCTGAATAGGTCACACGTTATACCACATGTAGACAAGAATATATTTCTTTTAAGGTAGAATGATAGATTTGAGTTTGCG ACTATTTGGAAAGTTGGATAAAAACTGCTCAGGAATGCTAGTGATTTTGGTGGATTTGTGGGTTTCATTTAGCAAAATCC AGTGTAGTCCTGTAAATGATAAAGGAGGCATCCTGCATACAATAGTCCAGAAGTAATGAGAGGAAAGAGAAGAATGGAAA ATGAGGAATCTGTGAGATGAGACTCTGATTGCACACATCCAATCACTCTTGTTGACTATGAGTCAGAGAGTGACATAAAT TGACACGAAAATAGTGGCTGATCTTGCTGCTCCCATTGAAGATGTTCTTCATTCACTTTTATAGCATCTGGATCCTCTTA GAGAGTAATCGCTTAGGAATTTGAGGACTCGCAACATGGTGAAGAAGTTTTGTCCTTTAATTGCAGCCTCTGTTTGTAGC TTCCATACAAGATCCGGGTAAGTTTTTCTCATTGAGGCATACGGAAAAAGGGTGTAAAATGTAAAGGAGCACTCGCTGGA GCCATTGATGATGTTCTTCATTCACTTTTCTAGCCTCTTAGAGAGTAACCGCTTAGGAATTTGAGGACTCGCAACATGGT GAAGAAGTTTTGTCCTTTAATTGCAGCCTCTGTTTGTAGCTTCCATACTAAATCCGGGTAAGTTTTTCTCATTGATGCAT ACGGTAAAAGGGTGTGAAAATGTAAAGGAGCACTCCCTGGAGCCACTAGTTGTGCGGTGGAAGAAGGATGCAATATATTG CCTGAACCCTGAAGCTAGCAGTAGTGGCTGTGACATCGATCTTCAAGGGCATACCAGGGCTTAAAGCTCCAGTACCATAC AAGGTGTAGAAAAGAGAAATTTCGAGAAGAATGGAAAATGTAGAATCTGGGAGATGAAACTCTGACTATTATGAAGAGTA CAGATATATATAGATTATTTGGAGTATAAATTTGTGGGTGACTTATGTTGCTAATGGCTTCTAGGGTGTATGAATATATA GGATTCCCATTTTTGGAGAGTAAGTCTGCGAGCTCTCAGTGAGGAGTGGACTTTTTTTATTAGCTGGAAAGGATGCTTGT ATTGGAGGTGGCTGTAATCATTCTTGGAGTCGATATACGTATTTGCTCAAGATGTATTAGTTTGGGAACATTCAAACTTT CTTTGTTCCTTACTTCCTCTCAGCTATGTTTCTGCTTGAAATTACTTGTATTTGCTGGCTTGGAGGGTAGCTGGAGTAAG TGCTGCCGTTTGAAGTGGCATTGTTGATGGCACATTTGTGTTGGAAGCTGCGACCATGTGCAGGCACTTGTGTTTCCCCA TTGAGATAATATGGGCTTGCATTATGTTTGTAGTTGAGGCAGACCACAAGTTCAACAAATGTGGATGGAATGGATAGATA TTTAAAAGTATTTTACACTACTGTTTAGTCGTGCTCCAAAACTTGTTTAGTTAGCTTTGGGTGCTATAATTTGGTAAATG CTATTATAAACTTGATATCAGTTAACATAGTATTATTTTACATGGGAATTGAGTTCATGAAAGTGCTATATTTTGCCAGC AAGAAGGTAGTGATGTGCTATATGTCTTGTATTGTACAAACTATTTATTTGAAGTGGACTGGAAATTGCTGATCTGAAGG TAGGATGAGATGTGGGAGTGAGCCTACAAATCTGCCCAACACTAGGATCCAAAGGGATGCCAATTTTATTCCCATTTTAA TTAATCTTCAAAGAGAGAAATAACTGTCTGGTAGTTTTGTTTCTCATACCATCTCAAAGTTTCTCGTTCTTTTTATTGGT TGGGGCTCTGAAATCTCATTGGTTGAGGCCCTTCCTGACACACAAGGTTCTCCTCTGTCGCGAGTACCACCGCTGAATAC CTGAAGAGAAAGCCTTCAGCCTGTGACGTCTGAAGGAGAGCTGTTTATCTGAAGCTCATAGGCAAGTGTTCTGCTTCTCT TTATCCCTGTGAATGATTAAAAAGAATATAGAACTTGCTATTATTATCCTGCTGATTACAATCATGTAAGATAGTGTGCT TCTTAATTTGAAACTGAATTAGGTCACAGGATTATATCAGCTTCAGATTTTGTTACTAGTGGACCAGAAATTTTAGAGTA ATGGTCAGAAATTTAAAATTTCAATCAACTTGTGAATAGTAGCAGCCTAGTTTTAGCTGTCAATGCATTCTATCTAAAAT CTTAGGAACTAAGATCTCCTATAGGCTCAAACGATTTGTTGGATACTTGGAGCTGTTTGAATTTTAGGGTGGAACACCTT CCTCTTGTGTTGTTCCTATAGGTCTCAATTCTTATCAGGCTTCTATTATGAGCAAAGGAAAATTAAGATCTTGATTTGTA TACATAACAAATCAGGTCAAGTGTATAATCATACAGTATTGTTAATTGCTCCTGGATTGCTGGAAGACCCAGTTAACATG GATGTATTATAGCTAAAGTTGAATGCTTGCATCTTATAGGTTGAATTTGTTTCCAGTGGTGGGTTAAGTATACTGGTTTT TATTGCTAGTTTTCTCTAATGAGGGATTCATATAGCAGGATATGGAATTGTGGACACTACCTTGTTAAAGGGCATTAAGG CTGGAGCTAGTTTATTTATATTTTAGGTTATGTTATTACTGCTGACCTTGACATGGATATTATGACTTGAAAAAAGCAGT CTCTCTTGTGTCATGAACCAACTACCCAAAAGCTTAAGCTATTGGGTAAAGGACACATGAATGGTTTTATATTATATATC TAACACTCTGGAATAAGCTTGACTGTGAGTCTGTGCGAGTAATGAGTGGAAAAGATGAACACACAGTTTCCTTAGTGAGA TAAAGATCTTGGGGTTATGTGTACTTGTGTCCTGGTTTCGATTTAGATTGAAAATACTGATGTGGAGTTCTGCTAGTACT CAAGCACTTACCCTCACAAGTCTTTTGAGATTACTGGTTTACTTTATCAGGGTGATGGATGCTAGCATAGCTTTGTAGCT TGCTTATCTAGTGCTCATAATTTTGAATAAGATTTTTTCTATTATCATATAAAAGGTCTTTTATTTTGTTTTGATACTGC TATTTCTGTATGATATACCATTAAGTAGTATGTTCCTTCACTTGTTTTTTATTTTGGTTTCTTCATGTATTTTTTCCCCA CAGAACTTTGTTTGCATTTGCAAGTAACTTACCATTCTACCTAACCTTGTATTTATTATGGTTACAGGTTTTGGCTGGGA ATCTGGTTTGGGACTGAGGAGTGATGTTGCCATAATGTTGTGAGATTTTGAGGAACACTGTAGGTCCTTTACGATTTCAA AAATACAAAACCGGATAACTTATCTTAGGTGAAGACTGGATGTCACTGGCAGAAGGAAGGATGTATTTTACCTGGTTGTG CTGGATCAGGATAACATATAGCCGCCTTTGTTGTTCGGATCATATGATTGAGGTTGGAAATGAAAGCTTTGGTGGTACGC ATGGATTGTTTCTTACGAGTTATGTGCTATAAGGTATGGCTGGTGCCATGGTAAGACATCTTCATGTATTGCTCAGTGCA TAACTCAATTTCAGATTGATTCTATGCGCAGACTACTATCAGTATGTTTAGAAACTCGTTCAAAAACCACATTGAAGTTA AAATCTTGGTGAAAGAGAAGCTACTTCCCTTAGCTTCTCCTATAGAGTAGAATTGATTATGGGTCTTGAAGACATAAAAC CAAACATGCAAATTTTTTTGAAGCCTGTCGGGCAATGATCCTTTACACCCAGTTTGTTTATCATTGGATTTTGGTTTAAA TTTGTAGATGAGACTATGTTAGAAAATTTTAGCACCTTTTTTAGAATTTTAGCACTTTAGAGGGTTAAGTAAGAAATCAC AACCATTGATTGAGAATGAGATTATGTTAATATACTTGTAAAGTGTATAACTAACTGTATTGTTTCTAAAATCTCAAAAG TTGATTTCTAATTAATGGTTGTGATGATTTACATTATCCTCTAAAGTGAATCTCTCACCTTAGAGGAGCTAAATTAATTA ATGTGCCTCAAAGGACTTGAGGCGTAGTTTGTCGGTTCGAGTTGTCCTCTGTGCACCTACCCATACGCGCACAGCCTTGT TATGATCAAATAGCGGCTCAACAGGGGGTTCAGACTTCAGAGGTTGTTTTACCAGTCTAATTTTTCAGGGGCCAATTTTT ATGGTGTTGGTTTTGCTGGGTTTGGTCATGGTTCTGCTGTTGTTTTCCAATTTTTAAATTCCCCTCCCCTTATTTCTGCT TTCTGTTGCCTTTACCATCAACAGTATTGAAGTTGCAAGTTGCTGTTTACTCCAACTTTGTAGTTTAGTTGTTCATGAGT AGGGAAGTGTTTGGATAAACAGTTTGATTAAGCACAGCATTTACATTTACCACGAGTTATATTGTACCATGAGTTCAAAT AGGTTGTTTCTTTTGAGTTTATGTAAATCTTGTTGATTTTTTTTTTTGAAAGTGTAATGCTTAATAATATTTTTGTGGAA ATGAATTTAAAATGAAC
CDS sequence (LotjaGi3g1v0024700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAAGGCACCGTGGTCACAGGGAACCGATGAGTGGCCGGAGGGGTTACCCACCTGAAGGGCCTTATACTCGTGG GCCGCCACCGATGCCACGACCGCATGTTCCCCCTCATCCGGCGCTGTTGGAAGAAGAGCTTGAATTGCAGCGTGCTGATA TGAGGAATCTTGCGGCGGAAAACAGGAGGCTTGTGGTGGAAAACAGGAACCTGAATGATGACAGGATGGCATTGCAGAGG GAACTTGCAGCCGTCAAGGAGGATCTTCATCGCATGATTGGCAACATTCGCGCTGACCATGATCTGCAATTAAGGGAGAT GGCCGAGAAAGGCATGAAGTTGGAGTCTGACCTTAGGGCAACCGAGCCCTTTAAGAATGAAGCTATACAGCTGCGGTCTG AGGTTAAGAAACTTACTAATACCAAACAGGAACTCACAGGGAAGGTTCAGACACTTACACAAGAAGTTTCAAGGTTACAA GCTGAAAATCAACAAATTCCGATGTTGAGGTCTGATTTGGATAACATGCACCAAGAGCTAATGCGTGCCAGAACCATGGT GGATTATGAAAAGAAAGCAAATATGGATATCATGGAACAGAGTCAGTCAATGCAGAAAAACTTGGTTTCCATGGCCCGGG AAGTTGAGAAATTGCGTGCTGAGCTTGCTAACGCTGATGGCAGACATTGGGGTGCTGGTGGAACTTATGGAACAAAGTTT GGTAGCCCAGACGGGGGTTATACAGCGCCATATGCAGATGGGTATGGTGTTCACCTGGGTGCTGCAGAGAAAGGTTCTCT GTATGGGGCTAGTGCTGCTTCAAGGCCTGAGAAACCTCGCATGAATCGTCGTTGA
Protein sequence (LotjaGi3g1v0024700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGRHRGHREPMSGRRGYPPEGPYTRGPPPMPRPHVPPHPALLEEELELQRADMRNLAAENRRLVVENRNLNDDRMALQR ELAAVKEDLHRMIGNIRADHDLQLREMAEKGMKLESDLRATEPFKNEAIQLRSEVKKLTNTKQELTGKVQTLTQEVSRLQ AENQQIPMLRSDLDNMHQELMRARTMVDYEKKANMDIMEQSQSMQKNLVSMAREVEKLRAELANADGRHWGAGGTYGTKF GSPDGGYTAPYADGYGVHLGAAEKGSLYGASAASRPEKPRMNRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | - | – | |
| MobiDBLite | 1 | 15 | 15 | - | – | |
| PANTHER | 1 | 258 | 258 | 1.2E-97 | – | |
| PANTHER | 1 | 258 | 258 | 1.2E-97 | ||
| MobiDBLite | 22 | 38 | 17 | - | – | |
| Coils | 42 | 88 | 47 | - | – | |
| Coils | 128 | 162 | 35 | - | – | |
| Coils | 201 | 228 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0024700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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