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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0031800 |
| Transcript ID | LotjaGi3g1v0031800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; TAIR: ATCG01110.1 NAD(P)H dehydrogenase subunit H (ChrC); Swiss-Prot: sp|Q9BBN8|NDHH_LOTJA NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; TrEMBL-Plants: tr|A0A0Y0TZD8|A0A0Y0TZD8_9FABA NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; Found in the gene: LotjaGi3g1v0031800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3396445..3397625) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATGTCCCAGCTACAAGAAAAGACCTCATGATAGTAAATATGGGGCCTCACCATCCATCAATGCATGGTGTTCTTCG ACTTATTGTTACTCTGGATGGTGAAGATGTTATTGATTGTGAACCAATATTGGGTTATTTACATAGAGAAATGGAAAAAA TTGCGGAAAATCGAACAATTATACAATATCTGCCTTATGTAACACGTTGGGATTATTTAGCCACTATGTTCACGGAAGCA ATAACCGTAAATGGACCGGAACAGTTAGGAAATATTCAAGTGCCTAAAAGAGCCAGCTATATCCGAGTAATTATGTTAGA GTTGAGTCGTATAGCTTCTCACCTACTATGGTTGGGACCTTTTATGGCAGATATTGGTGCACAAACTCCTTTCTTCTATA TTTTTAGAGAAAGGGAATTCATATATGATCTATTCGAAGCTGCGACAGGTATGAGAATGATGCATAATTTTTTTCGTATT GGAGGAGTAGCGGCCGATCTACCTCACGGTTGGATAGATAAATGTTTTGATTTCTGCAATTATTTTTTCACAAGGGTTGT TGAATATCAAAAACTTATTACGCGCAATCCTATTTTTTTGGAAAGGGTTGAGGGGGTGGGTGTTGTTGGTGGAGAGGAAG TAATAAATTGGGGTTTATCAGGACCAATGCTTCGGGCTTCCGGAATACAATGGGATCTACGTCAAGTTGATAATTATGAG TGTTATGAAGAATTTGATTGGGAAGTTCAATGGCAAAAAGAGGGAGATTCATTGGCTCGTTATTTAGTTAGAATTGGTGA AATGATGGAATCCATAAAAATTATTCAACGGGCTTTGGAGGGGATTCCCGGCGGCCCCTATGAAAATTTAGAAATCCGAT GTTTTGGTAGAGAAAAAGAACCAGAATGGAATGATTTTGAATATCGATTCATTGGTAAAAAACCGTCTCCAACTTTCGAA TTGCCAAAACAAGAACTTTATGTAAGAGTTGAGGCCCCCAAAGGAGAATTGGGGATTTTTTTAATAGGAGATCAAAATGG TTTTCCTTGGAGATGGAAAATTCGTCCACCGGGTTTTATCAATTTGCAAATTCTTCCTCAATTAGTTAAAAGAATGAAAT TGGCTGATATTATGACAATACTAGGTTAGATTTAAAAACCTTCACTTGACAATAATCTAGA
CDS sequence (LotjaGi3g1v0031800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGTCCCAGCTACAAGAAAAGACCTCATGATAGTAAATATGGGGCCTCACCATCCATCAATGCATGGTGTTCTTCG ACTTATTGTTACTCTGGATGGTGAAGATGTTATTGATTGTGAACCAATATTGGGTTATTTACATAGAGAAATGGAAAAAA TTGCGGAAAATCGAACAATTATACAATATCTGCCTTATGTAACACGTTGGGATTATTTAGCCACTATGTTCACGGAAGCA ATAACCGTAAATGGACCGGAACAGTTAGGAAATATTCAAGTGCCTAAAAGAGCCAGCTATATCCGAGTAATTATGTTAGA GTTGAGTCGTATAGCTTCTCACCTACTATGGTTGGGACCTTTTATGGCAGATATTGGTGCACAAACTCCTTTCTTCTATA TTTTTAGAGAAAGGGAATTCATATATGATCTATTCGAAGCTGCGACAGGTATGAGAATGATGCATAATTTTTTTCGTATT GGAGGAGTAGCGGCCGATCTACCTCACGGTTGGATAGATAAATGTTTTGATTTCTGCAATTATTTTTTCACAAGGGTTGT TGAATATCAAAAACTTATTACGCGCAATCCTATTTTTTTGGAAAGGGTTGAGGGGGTGGGTGTTGTTGGTGGAGAGGAAG TAATAAATTGGGGTTTATCAGGACCAATGCTTCGGGCTTCCGGAATACAATGGGATCTACGTCAAGTTGATAATTATGAG TGTTATGAAGAATTTGATTGGGAAGTTCAATGGCAAAAAGAGGGAGATTCATTGGCTCGTTATTTAGTTAGAATTGGTGA AATGATGGAATCCATAAAAATTATTCAACGGGCTTTGGAGGGGATTCCCGGCGGCCCCTATGAAAATTTAGAAATCCGAT GTTTTGGTAGAGAAAAAGAACCAGAATGGAATGATTTTGAATATCGATTCATTGGTAAAAAACCGTCTCCAACTTTCGAA TTGCCAAAACAAGAACTTTATGTAAGAGTTGAGGCCCCCAAAGGAGAATTGGGGATTTTTTTAATAGGAGATCAAAATGG TTTTCCTTGGAGATGGAAAATTCGTCCACCGGGTTTTATCAATTTGCAAATTCTTCCTCAATTAGTTAAAAGAATGAAAT TGGCTGATATTATGACAATACTAGGTTAG
Protein sequence (LotjaGi3g1v0031800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNVPATRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHREMEKIAENRTIIQYLPYVTRWDYLATMFTEA ITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFIYDLFEAATGMRMMHNFFRI GGVAADLPHGWIDKCFDFCNYFFTRVVEYQKLITRNPIFLERVEGVGVVGGEEVINWGLSGPMLRASGIQWDLRQVDNYE CYEEFDWEVQWQKEGDSLARYLVRIGEMMESIKIIQRALEGIPGGPYENLEIRCFGREKEPEWNDFEYRFIGKKPSPTFE LPKQELYVRVEAPKGELGIFLIGDQNGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 382 | 382 | 2.6E-292 | – | |
| PANTHER | 1 | 382 | 382 | 2.6E-292 | – | |
| Hamap | 7 | 382 | 376 | 40.284 | ||
| Gene3D | 9 | 382 | 374 | 5.5E-142 | ||
| SUPERFAMILY | 20 | 381 | 362 | 3.53E-115 | ||
| Pfam | 124 | 382 | 259 | 2.9E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on NAD(P)H | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Quinone binding | Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds. | ||
| Molecular function | NAD binding | Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0031800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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