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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0036400 |
| Transcript ID | LotjaGi3g1v0036400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein; TAIR: AT1G31080.1 F-box family protein; Swiss-Prot: sp|Q9SA02|FB26_ARATH F-box protein At1g31080; TrEMBL-Plants: tr|A0A1J7H7J9|A0A1J7H7J9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0036400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3969186..3976194) extracted from Lotus japonicus Gifu genome v1.2.
ATTATTTTTTCAATGGTTACATAAACAATTTCAACAATTAACGGAAAAAATATCTATGCTAACAAAACTAATAATTTTTT GAAATTATTACTTAATAATTTTTTATATTATATAGAGATTAGTTATGAAAAAAACTTAAAAAAATTGACACATCATAAAA TTATTTAATCTTTAATTTATGTTAAATTTAAACAATTTAAAAATTGTTAAGTAAAATCGACCGCGACCCGTGCGGATGCA CGGGTAACTTACTAGTTCACTACTAAAAAGAAAAGAAAACAAGTCAAGTACAATCTCACTCCGTTAACCATTATTATTAA AATAATACAGGTGGCAGAGTTTTATTTGAAAACAGGACAAACTGGAGGTAAGCAACTGTACCTAAGTTTTACCCTACAAC AACGCTCCTCTACTGGATCAGAAATAGTTAATTACATTCTGTATCCTAAGCAAGGGGCATTCCTGGAAATTCACCAAATT TCCAAATTCGACCGTTACATTCAAAATCCAAAACCATTTCGTTTATAACTCTCTTTTCTTCTCCCTCACTGTTTCTCTCT CAAATTCCAAGCAAAACACAACACATTCTCTGTGATTTCACTCTGTTTTCTGCAATGGCCAACGACGACGCCGACGCGAT GACGACGAGAACATCGATCATGGACTGGAAGCAGATGCACCCACTTCACCAAATCGCAGAAACCCCCACCCACAAGCTCC TCCTCAAGCAATGGCTAAAAGAAGAAGAATTAATCCATGGCCGCATCGCGCTGAAAGAAACGCAGATCGATTCGATCCAC AAGGAGATCACCATGCTCTAGCCATTTGTAGGTGGCTTCCAAAAGATAACGTTGTTCACTGTTCTGTTTTCAAAATATAT GAGGGAATTTTAAAAGGTAACTAGAATTTATATATTTGATTGGTTAATTTAAAAAAATAAATTAAAATATGTTATTTAAA TAAAAAAGTTGAGAGAGATATTTAAAATTAAACTGAAACTATATCTTATGTCGTAATCTTTTTTTTGGTCGATAATCTTA TCTTAATCTATCTATCAAAGTATATAATTTGGCCCATGAAAAAATAATCAATCTTGTATATAAATAAATAGTTTGAGAAC ATTAAGATTAGGTTTGGTATTTGGGAACAACCAAGCCAAGCCACCAACACAAGCCAAGCATGGAAATCGTAACCGATGTT TTCCCTTCCGAACTCGTAATAGAAATCTTGTCATGGCTTCCTGTGTTGAGCTTGATAAGATTCAAGTGCGTTTGCAAGTC ATGGAAATCCCTCATCTCTCACAACAAAGCATTCGCCAAACTGCAATTGGAGAGAACATCGCTCAAAATCAACCACGTAA TCCTCACCTCCTCTGACTCCTCCTTCATTCCGTGCTCTCTGCCTCGCTTGCTCGAGGACCCATCATCGATTATGGACCAG TTGGTGATTGTTTCCCTTGACATGCGTCAAGAGGCATACCGGTTATTGTCACTACCTCAGGGTACTTCTGAGCTGCCTTA TGCTGAGATACAGGTTTTGGGGAATTGCCTTTGCCTTTTTTATGACTTTAAGAGAACCCATTTTGTTGCCTGGAAAATGA GTGAGTATGGACTTCCAGAGTCTTGGACTCCTTTACTGACTATCAGTTACCAACATCTTCGATGGGATCGTCGTTTTTAT CTTCATCAATGGCTCATATGCTTGTGTGGAGATGGACACATCTTTATGCTCGCCAAAAAACAGAAATTGGTTATCATATA TAATCTAAGTGATAATGGTGTCAAATATGTTGAACTTGCCAGCAACAAACTTTGGTTGGATGCCAATGATTATGTAGAGA GTCTGGTTTCACCATGTTAAGATTAAGCTCATCCGTGACAGTTTGTTTTTTCCCAATTTATCTTAAATTATTATGTTATG TAAGAGGTGATTACTGTTATTTAACTTTAATAAATTTACTAATTCGTCACTGACTTTATTGGCTGTTGTTAAGCTTCTTT GGTGCTTCAAAAGGTCGCAGATTAAGATGCTAGTTATTATAATTTGGACATATGCTTAGATAAAAGTGATTACTTTTAGA ACATAATTTGTTGATTTTTTTTTATAAGCACATAATTTGTTGATAATTCCATATAGTTAGTTATTTTGTGTTTATCTAAA CTGAAAACCTATTTGTTTGCATAAGCGGATTATTTTAGCTAAAATATATTAAAACCATTCAAATTGTAAGGTGTGATTGA TAGTACAAAATAATTTATCTACCCTACTTAAATGCAGAAAAAGGCTAAACAACAGTGACAATTAAGAAAAGTAGAAGAGC AGATAATCATAACAGATCAGTTCAAAAGGATTAGGACATGAGCGATTTTCATAGTAAAAGCTTGCCTTAATCTAATGCAA TTGCAGATTTCATCCGAGTATTCAATTGTCATTTTTCTTATCTGCATAGCTAGACAGCACAAGCCTTTGCAGGAGAAGGT CTTTAGTATTTATCACAACATATATATTTGCAAACAACATTTGATAAATTGTATCCAACCCCAGATTTATTTCTGAGTTG AAACTGATATAGTCAGGGAACAAGTAGTACGAGTGGTCACTGGCAGCCACCAGCTGCGAATCCAATCTTGGAATTGGCAA CATCATAAGCCACCTTATATGTCTATTGGCACCTTCCACTCTCCAGCTTCTTCAGAATTCCGCCAATCTTCCCATGGTTG GTAAACCCCTCTACAGTGTCGTTTCAGATTCTGTCTACATCTCTGGCCAGCATCGTGTTCCTTACATCGCCATTGGAGGT AATTGGTAATTTATTGTTATTGTGTGTATGATTATGAAATATGAATAGAAGGGTTTCATTCTTAGGAATAGGGTTTAATT TATTGTTAAAGCATAAAGGAAAAGGGATGAGTAAAAAGGAGGATTGAGATTCCAGAATTTGGAATGGTTGGGTTTTCTTT GTGTATATAAAGGTATGAATGTCATTGTTTCTTGAGCATATCAGCTTCCTTGGGAAGGAAATGCAGAATATCACAATTCT TTCTAGGAAGTAGTTAACAGATCAATGGTTGTGAATAGATTTCTTTGTTTTCATTTTTAATAGAAGAAGGGGTAGAAAGA GTGGTGATAACTAATAAGGAATCATCCTAAGAATTTTTTTTAAGAAAGCTAGAGGTCAAGCAGAAACTAAGCTAACCCCC CTAGCAAAACTAATTTCAAAATCGATCTCGTATTCCTCTGTGAATGTGCTGTAACTCTGGGGCAGAGTAGCATTTTGCTT CTTTGAGTCTCTATTTTTTCCTCTTTTATCTGTTATTATTCTTGATTCTGTTACTATAATTAGAGCATACATTTTTCTAT AACTCAAGTGTAAATACCAGGAGCTATCAGATTCCTAGAAGTAAAGTAGTAAACAATGTCCTGAACACTAAAGAGAGGCC AAATCTGCTGTTCTGCACCAGAGTATGACTAAGGAAAAAGAGTAAAAGATCTTCCTTTAAAATCCAAGAATAGAAGTATG GTGATCTCACTGCCAATGAACATTTCCCCTCCTTATACATGGTCACTTGGGAACTGGGATAAGACGTTGTAGTTGGTTGT TGAGTGTTCGTTGATTTGAACATCAACTATTCAAAATAGAGACATTTGAATCAGCATTATCAGCTTTCCCTCTAACCAGT TGTTTTTAGGCTTAAAAGCACATTTGGTCCCCCACGAATGAGATTTGTGCAAAATGAGTCCCTAAACTATTTTTTTAGCA TTTTCGGTCCTCCACGTTATCTTCTGTTACCAATTTTGATCCTTATCATTTTTCTATCAAAAATCTAACGATTTTTGGAA AATCCAAAAATATTCATGCACTACTTTATCTCCTTCATACATCATTCTATGCTCTTCATATGTTCTTCAACATTTTTCCA GAAAGAAAGGGAAAACAAAATCCATAAAGCCATAACCCACCCAAAATCTCCAACAACATCAAAACCCAAAATCTCTTTCT CAAGAGCCACCACCTCATCTCCAGATCCAAAATATGACCCGCCAACCTCAACCACCACACCACGTCCTCTTCTCCTTCCT CCCATAGCAGCCTTCTACATCCAACCTTCAAAGCACCTGCTCCTCTTCTCATAGGAACCACGATCACTTCTCTCTCCCCC GAATCACCACCACAGCTGTCTCCTCTGTCCAAATCGCATCGCCGCTGCTCTGTATTCCCCTTTCCAGCGCCGTCGAGACC TCACTCAGTCACCTCCGACCCAAATCGTGATCTTCTCTCTCGTTAATGGTGTTTATTTCGAGTTTTAATTTCTTTTCAGA TCTGGATGGTGGGTTTGGTGTAGGTTGAGGGAGGGTCTCCAAATCTGCTTTGCTGGTTCGTTTTGGGCTCCATTACGAGG ACTTGTTGTTATGACTTTTGGTGACAATCTCACTTGGCATCATCTTTTGGGATTTGGATGCTTGCCGATTTGTTTTCTGG TTGGGTTATGATTTTTTTGCTGCTGTTTGTGTTCCACAATTTGGGATGTTTTGCTGCTGTGTGTCCATGAATTGGGGGTT GTGATTTGGGATGAGAAAACCCTCTCAGCATGAGTTTCTAAGCATTGATTTTAAGAGTTTTGGTGAATTAAATGGAAGAA GGGATTGTGATGATGAATTATTTTATTTTCTGGATTTAATACTGGAGAAGATGATGAACATGAAGAGGAAGGAGATGAAG ATTCATGATTTTTTAATTTTAATTAATTTCATCAATTTAAATATCATTAAAAAATTCCACATAAGCAAAAAAACGTTAGT TTTTTAACGGAAAAGAGAAAAAGGACCAAAACTAATGACGGAGTATAACGTTGGGAATCAAGAATGCTATTTTTGAAGTT TAGGGACTCATTTTGCACAAAGCGCATTCGTGAGGGACCAAAAGTGCTTTTAAGCCTTGTTTTTATTATACAGAAACCAG ATACTGTTTTATTATACAGCTTTCCCTCTAACCATTCACTGACCTTGGAGCTTGTATTTTATTGTCTTCTATTGTGGACG AAGCAAAACTGATAATAACATTTATTCAAGCCAATGCTTAGTACAGTTTCCAAGAACACAAGCAAACACCACTTGGAATT TGGAATGCTGAAAGTACTCTCTTCATTCTGAATTTGTTTATTTCAAGTGCTATTTTACTGTAACAACTGCTAAGTGGAGC TACTAGTTTAGTTCTGATACATCCATTCTGTAAAAAATATGTGGATTAGGATCCGAACTTATAATTTTTATCTAAAAACT TGAGTCTGCTAGTTGGTTTTAATTCATTCAATGCTAAACCAAACCTAGGTAAGTTATACCATTGTAGATAATGAGAACAA GTTGTGTCTATATATACATTTGTCACACTCCAATTGGCACCTCTACATCTTTGATTGCATTTAGCATAAACAATTGGTAT ACGTTTTGTTTATAGGCAGATGTTAGTTGTTAATAAATTACAAATATCACCCTACAGGGTTTGATTGCATTCTACAGGGT TTGATCCCTTGCCCTTCACCTTCTATCAACCTTCCCCTCCCCCCCCCAACGATTGATATAAGTAAGCCTACTCCTTCCAT ATCTATTGCTTTTGGGGATCGTATATAGCTCAGGTGCGACATGGTGGAACTTTGTATGAATTATTTTCTGTCTACTTTCG GTTAAAGTGTTGCTTCTTTTAAATTATCCCCTATCCCCTCTAGTTAATGATAATCCTTGGAAAGGCACTCCTAGTCAAAA TGTTTACTTAGAGGGAACTGCTGTATGATAACGCTTGCTTACCAATTTTTAATAGTTAACCAATTGTTTGACTTGGTTAC CACTTGGCATGAATCTATTCCCTTTGGCTCAGACATTTTTTCCTGGCTTGGTTTTCAGCAACCTCCCCTCTTTTATTTTT TATATATTTTGCGCAAATATCATCCTTTTTTATTGGTTGCTGAATTTAGAATTGGTATTGATTCTTCATTCAAGTTGGCA TGTAACATAGCAACTTTGATGGCATTTTCTGATTTTGTGCAAGTAGCCTCATTCCTGCATCTCTTCTTTATATGCTTGAC TAGTTGGAAGGTCTGGACAGGTATTCTGAACTGGCTTGGGATTGTAATGGTTCTCCCAATTGATGGTGCTATTCATTTCC CTCTCTTTGCTAACTGCCTGCCAGGAAACAGGAAGCGGAAACGAGCTCTAATTCAAATCTGGATTGCTACTGTAGGGGTT CTATGGAAGGCTAGAAATGATGCTGTTTTTAAAGGTGTGGTGATTGAATGGCCTAGGCTCCTAGAACTGATCCAATAGAG TTTGGCTGTGGTTCAAGGCAAAGGAACAAGGATTTCAATATTCTATGTTTGAGTGGATTGATAATCCTTTAACATGCGTG GACTCTCTGTAGTGAAGGTGAAGGCTCTTAGATTTAATCTGTAGAAGATGTAAATTAAGACTGGTTGAGTCATGAGTGGT GGACTTGGCCAATCACTCTCTTTATATATGCTATATGGTTTCTGCTGTTCACCCTTTATTCATCTCAAACTTGGATTGGG GTTTGATAATATTGTAATATCATGCTTGTGGGGGAATTCTTGGTGGTGACTTCTTGGCTGTTAGTATTATTTGTCTAGTT TGGAGGTGACCTCTTGGTGGGTGGAGATATTTGTCTAAAATAAATTGAGAGTTGGCACTGATCTCGGATGTATAGGCCCC TGTTTTTGTTTTAGTTCTCCTTTGGGGATCTCCTTTGACTCCTGTGAACTTGTACTTTTTTTCCTTCACTAGGTTTTCCC AATGGGGTTTTTCCTAGTAAGGTTTTAATGAGACATGTTTCCTTGAGTCTTTCTCCAAGGTGTAGTAGGGATTGTTATCA AAGTGGAAGGATTCTCCGCTTTTGTAAATGTTGTTGCTTTTTATTTTTCATTCTCTCATAACTTGTATTGGGTTGAAGAA TCCCTTGTACTTTTGCTTATAAAAAAACAACCGTTAGTAAACGTGAAAG
CDS sequence (LotjaGi3g1v0036400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATCGTAACCGATGTTTTCCCTTCCGAACTCGTAATAGAAATCTTGTCATGGCTTCCTGTGTTGAGCTTGATAAG ATTCAAGTGCGTTTGCAAGTCATGGAAATCCCTCATCTCTCACAACAAAGCATTCGCCAAACTGCAATTGGAGAGAACAT CGCTCAAAATCAACCACGTAATCCTCACCTCCTCTGACTCCTCCTTCATTCCGTGCTCTCTGCCTCGCTTGCTCGAGGAC CCATCATCGATTATGGACCAGTTGGTGATTGTTTCCCTTGACATGCGTCAAGAGGCATACCGGTTATTGTCACTACCTCA GGGTACTTCTGAGCTGCCTTATGCTGAGATACAGGTTTTGGGGAATTGCCTTTGCCTTTTTTATGACTTTAAGAGAACCC ATTTTGTTGCCTGGAAAATGAGTGAGTATGGACTTCCAGAGTCTTGGACTCCTTTACTGACTATCAGTTACCAACATCTT CGATGGGATCGTCGTTTTTATCTTCATCAATGGCTCATATGCTTGTGTGGAGATGGACACATCTTTATGCTCGCCAAAAA ACAGAAATTGGTTATCATATATAATCTAAGTGATAATGGTGTCAAATATGTTGAACTTGCCAGCAACAAACTTTGGTTGG ATGCCAATGATTATGTAGAGAGTCTGGTTTCACCATGTTAA
Protein sequence (LotjaGi3g1v0036400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIVTDVFPSELVIEILSWLPVLSLIRFKCVCKSWKSLISHNKAFAKLQLERTSLKINHVILTSSDSSFIPCSLPRLLED PSSIMDQLVIVSLDMRQEAYRLLSLPQGTSELPYAEIQVLGNCLCLFYDFKRTHFVAWKMSEYGLPESWTPLLTISYQHL RWDRRFYLHQWLICLCGDGHIFMLAKKQKLVIIYNLSDNGVKYVELASNKLWLDANDYVESLVSPC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 2 | 48 | 47 | 11.511 | ||
| Gene3D | 3 | 45 | 43 | 6.7E-10 | – | |
| SUPERFAMILY | 6 | 55 | 50 | 2.49E-12 | ||
| SMART | 8 | 48 | 41 | 3.1E-7 | ||
| Pfam | 9 | 43 | 35 | 8.8E-9 | ||
| PANTHER | 13 | 59 | 47 | 1.1E-18 | – | |
| PANTHER | 13 | 59 | 47 | 1.1E-18 | – | |
| PANTHER | 87 | 196 | 110 | 1.1E-18 | – | |
| PANTHER | 87 | 196 | 110 | 1.1E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0036400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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