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LotjaGi3g1v0041300.1

Overview

Field Value
Gene ID LotjaGi3g1v0041300
Transcript ID LotjaGi3g1v0041300.1
Lotus japonicus genome version Gifu v1.2
Description Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A; TAIR: AT3G14920.1 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; Swiss-Prot: sp|P81898|PNAA_PRUDU Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A; TrEMBL-Plants: tr|A0A0B2PJP1|A0A0B2PJP1_GLYSO Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A; Found in the gene: LotjaGi3g1v0041300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:4450917..4456938) extracted from Lotus japonicus Gifu genome v1.2.

GGTTGATGAGCACTCGACCTACTCCGCCCGATGAATTAAGTGGGTTGACTCGGCTCGACTCCAATTCATCATCCCTGAAT TTGAGTAAGAAAATAGTTGTGGATACAAATAGATTGATGAAATGAAATCTTTGCAAACATCACCCCGCCTTATGCTATGG TCAACTCTTTCATTCCCTTCCTTGTCCTCTCCCTCTTCCTTCTCCATTTCCCTCTCTATGCCGCAAACTTCCACAAGCTC AACCAACTCCAACCAGATTTTCTCGCTGAAGCCACATCCTCTGACGACACAGCACCACCAACTGAGTACTTTGAGGTAAC CAGACCCATTGAACTCCCCGAAACAAAACCTTGTTCATACAACGTTCTCCACCATGATTTTGCCTACACATATGGCAAAC CCCCAGTTCTTGCAGATTACACCCCTCCCTCTCAGTGCCCATCACAGAAATTCTCCAAGATCGTTCTTGAGTGGAAGTCA ACGAGTAAAGGAAGGCAGTTTGATCGCATTTTTGGTGTGTGGCTTGGTGGGGTTGAGCTACTCAGAAGCTGCACAGCAGA GCCAAGAGCTACTGGAACTGTTTGGACAGTTCAAAAGGATATCACAAGGTACCATTCTCTTCTATTGAGTAACCAAACAC TTGCTGTTTATCTGGGCAATATTGTTGATAAAACATATACTGGGGTTTACCATGTTGATATCACTATCCATTTTTACCCT GATGTTGAGTCAAAGTTTGCTGGTTTAGCATCTGGGAGTGGTTTCCCTGCGGATTTGATCTTGCCCATTTCGAGAAACCT TCGATTGAATGATGGGTTGTGGTTCCCTATTGTGAATTCTTCTGATGTAGGCTTGAAGGAGTTTAAGGTCCCTCAAAATG CTTATAGGGCTGTGTTGGAGGTTTATGTTTCATTTCATGAGAATGATGAGTCCTGGTATGCCAATCCTACAAATGAATAT CTTTCTGTGAACAATCTTACTGATGCACCTGGGAATGGTCCATTTAGGGAGGTTGAGGTTACTCTTGATGGGAAGGTTGT TGGTGCAGTTTGGCCTTTTACTGTGATTTATACAGGAGGGGTCAATCCTCTCTTGTGGAGACCTATTACTGGGATAGGCT CATTTGATCTTCCATCCTATGATATTGAGGTTACACCCTTTTTGGGGACTATATTGGATGGACAAACCCATTCATTGGAG TTCAGTGTGACTAATGCGTTGAATGTTTGGTTTATAGATGCTAATTTACATCTTTGGTTGGACACAAAGAGTAGTAGAAC CGAAGGAGAACTTGTGAGTCTTATTGACAAACCTTTGGTTGAATATCTAGTATCTGATATCAAAGGTTTAAACGGAACAT TCTGGACTAGGGCACAGAGGTCCATTTTGTCTACTGGATGGGTAAAATCCTCCTATGGCAATATCACAACCAGTTTAGTA CAAGATTTTGTTTTCCACAATAAATTGGTAATGGGGAAGAATGGGCGTAAGCAAACTGTGAAGCAAACGATTTATTTCAA TGACACTGTCCATGCTAAACTTCCATCACCCCTTCTTGATTCTATTGAGGAAACACACAGAAAATTTTCCCTGTATTTGG CCTCAGATGAATTGGATCAGGATAATGATACTTATTTATCTGTTGAAAATGTTACACTGGGATTTGAAGAGAACAAGTCT AAGAGTGGAGATTTTGGATTTTCAAAGAGCTCTCTCAAAAACATGCAGGATGGCCAGGGCACTATGGTTGTTAGAAAGAA TTTGGTTCTTAAGGGACAGGGTGAAACACATCAAGATTATGGATACACAAGCACTGGATATTGCTATTCTAGGAAAGTTG GCAGCTCAAATTACACAATTCTATATGATAAAATCAGAAATTCATGCCAGAAAAGAAGTCACCCTCATTTTGGCCTTAAT TTTATGAAAAAGTTGCCCATTATGCTCTAGGGTCCTTTCTTATAGGAAAAGAGAAGTTAACTCTCCGTTGCTTGGTTCTT CATGTTCTTCCTTTTTATAAAGGTTCCTTTATAGTCCAATCTCGAACATTAGTTCTGTGCTGCCTGTGTTAAACTGTTGT CATTTCGCAACTGGGATTTGTGAGTCTGATTTTTATTTTATTTTTTTCAACCTATGTGTAATAATCAAATTATGATCTCA TTTCTTCTGCCACTTACTAAAACATGATTGGTTCTCAATAGATTTTGTATGTCTTAAAAAGGTTTTGCTTGTATAGTTTT GCATAAGGAACAGTCCGGTTACTGGCTGGAGCCCGTTCTATTTAAATTGTAGTTTCTCCCCTGCTTTTATTTGTTCCCAT GCCCCTGTATAAGTGTTTTAAGGTTGGCATGATGCTCTAAATCTGACTTTATCAAAGGTTGTCTTCGAAGTATCTTCTTG GAGGTGAAAGGAATCATTTCGAGGATAGAAGAGGATTTGGAGAGCCGTGGTTGTATAGATTATCGAAGAGACTTCTTATT CTGTTAGAGGAGAAGTGCTGGTAGTAGTAGGTTTCGTCATCGTGGTGATTAGGAATGAAGCTTTGAATAAATCATCACTG TGTATTCTCCGGTGAAAACCCATAGATTAATTTGAAGGTGAATCAATGAAGAAGCTAACAGTTCCAACTCCAATAATGGC AATGACCCGAGAATCAATCAGGTAAACCACATTTCCAAGAACACTTTATTTGTTCATTCATAGAACATGTTAGAAATCAC ATATCCTAGCTGTTTCTATGATTCTATTTCTGGTCACAATATTTTTTTTCTTCTTTTATATTTGGCTTCTCTGCTTGACG CTTGAACTATTTACACAATTGATGAAACGAAACTTCTAAACATTTAGAAAATCACTAGTGCATACTGCCATTATGGGTTA ATTTTCTACTTGTATTAGTTGGTTTTCTTTTATTATTTATTTTTTCCTTTGTAGGATTCAAAAGTGGGACAATGGTGCAT GCTGCTGCTCTCACTAGAGTCTAGAGGAAGATGTTTGTATGATTTTAAGAAAACACAAAACATGTATCATTGTACAAGAG ATATGCTGATGTTAATACCTCTTGAACATGCAGTTTTCCTACTTGTTGACTCTGATTACTTTGTTTTCTTAGGTTTATCT TACCTTTAACATTAGTTGATTATTACTATATGCATGAGTAATAGCAGAACACAAGTATATCAGAAATCCTAGTATTAAAT CTGAAGAGAAGTGAAGATAGTTAAATCCTGATCTAAGACGAAAAATTGCATCAATTGATGATAATTGTGTTGACTATGAT CTCCAATTAGTAAAGCTGGGCCAACTTGAAACTTGAAAGCCAATGGTTTCTTATTCCTGAATGAGTTCATGCTTGGGCAG TGTTAAATATCCGTGTCCCACTGTTATGCTGAAGTTGCTCAAGCAGCAATTCAACATTTAATTATAAATGAAACCCCTTG GCCTGCATTATTTGTGCTTTCAATTTTCAAATGGTTCATTGATTTTACATAAAGTAAATAGAAGTGGATAGCACCTTTGA TATTTCAGTAAAGGAAAAGTTTGGCTTGATAGTAATTGAAAGCAAGCGTTTTGAATTTTGAAAAAGATAAGCACAAATTG TCACCTGAAAGCAATCTTCGAGTCTCCAATTTTTTCCTAGCATCCCACAAAATCAGTGTTCGATGATTTATATCCGATTG AGTGATCTGGCCTCCAGCAAGTGCATCATGCTTATAAAACATGTGCTCGTAGGTCGACGTCACCACAATCACCATCCCAG GGTTCTTCACTTCAGTAATACTAATATAATTATGCTTATACAAACCTATTCAAGCAAAAACTTTACAGGACATGTAAATT TTATTGGAAACTGATCATGTTTTAATATACGGCAAGAACAAATGAGATCATAATTTTATTATTACATATAGGTTGAAAAA AGGGAAACAGAATTACAAATCACAGTTGCGAAATGACAACAGTATGACATAGCCAGCACAGAACTTTATAAAAAGGAAGA GCATGAAGCACCAAGCAATGGAGAGTTAACTTCTCTTTTCATATAAGAAAGAACCCTATAGCATAACGGGCAACTTCTTG AACAAATTAAGGCCAAGACGAGGGTGACTTCTTTTCTGGCATGAATTTCTGATTTTATCATATAGAATTGTGTAATTTGA GCTGCCAACTTTCCTAAAATAGCAGTACCCAGTGCTTGTATATCTATAATCTTGCTGTGTATCACCCTGCCCCCTAACAA CCAAATTCTTTCTAACAACTATAGTACCCTGGCCATCCTGCACATTTTTTAGAGAGCTCTTTGACACTCCAAAAGCTCCA CTCTGAGACTTGTTCTCATCAAATCCCAATGTAACATTTGCAACAGATAAGTAAGTATCGTTATCCTGATCTAGTTCATC TGAGCCCAAGTAGAGGGAAAATTTTCTGTGCGTGTCCTCGACAGAATCAACAAGGGGTGATGGCGGTTTAGCATGGACAG TGTCATTGAAAAAAATCGTTTGATTCACAGTTTGCTTATCCCCATTCTTCCCGATTACCATCTTATTGTGGTAAGAAAAA TGTTGTACTAAACTGGTTGTGATATTACCATAGGAGGATTTGACCCATCCAGTAGACAAAATAAACCTCTTTGCACTAGT CCAAAATGATCCATTTAAACCATTGAAGTCAGATACTAGAGATTCAACCAAAGGCTTGTCAATCAGATTCAGGAGTTCTC CTTCTGTTCTACTACTCTTTGTGTCCAACCAAAGATGTAAATTAGCATCTATAAACCAAACATTCAGTGCATTAGTCACA CTGAACCCAAATGAATGGGTTTGTCCATCCAATATAGTCCCCAAAAAGGGTGTAATCTCAATATCATAGGATGGAAGATC AAATGAACCTATCCCAGTAATGGGTCTCCACAAGAGAGGATTGACCCCTCCTGTATAAATCACAGTAAAAGGCCAAACTG AACCAACAACCTTCCCATCAAGAGCAACCACAACCTCCCTAAATGGTCCATTCCCAGGTGTACCAGTAAGATTATTTGCA GAAAGATACTCATTTGGAGGATTGGCATACCAAAACTCATCACTCTCATGAAATGAAACATAAACCTCCAACACAGCCCT ATAAGCATTTTGGGGTATCTTAAACTTCTTCAAGCCTACATCAGAAGAATTCACTATAGGGAACCACAACCCATCATTCA GTGGAAGGTTTCGCGAAATGGGCAAGATCAAATCCGCAGGGAAACCATTCCCAGAAGCTAAACCAGCAAACTTAGACTCT ATTGGATAAAAATGAATAGTGATATCAACATGGTAAACCCCAGTATAAGTATTATCAACAAGATTGCCCAGATAAACAGC AAGTGTTTGGTTACTCAATAGCAGAGAATGGTACCTTGTGATATCCTTCTGAACAGTCCAAACAATCCCAGTGGCTCTTG GCTCTGCAGTGCAGCTTCTGAGAAGCTCAACCCCACCAAGCCAAACACCAAAAATGCGATCAAACTGTCTTCCTTTACAC GTTGCCTTCCATTCAAGGACGATTTTGGAGAATTTCTGTGATGGGCAGTGAGAGGGAGGGGTGTAGTTTGCAAGAACTGG GGGTTTGCCATATGTGTAGGCAAAATCATGGTGGAGGACATTGTACGAACATGGTTTTGTTTTGGGGAGTTGTATGGGTC TGGTTACCTCAAAATACTCAGTGGGTGGTGTTGTGTCGTTGTTTGAGGATGTTGTTTGAACGAGAAAATCTGGTCGGAGT TGCTTGATCTTGTGGAGATTTGCTGCAGAAAGAGGGAAATGGAGGAGGAAGAGGGAGAGGACAAGGAAGGGAATGAAAGT GTTGTCCATGTTTTTGTTGCTTAAGAGTGTGGGGTGATGTTTGCTAAGATTTTGCTTGCATCAACATATATTTCAATTTT CAAGCCATTTGAAGTTGTGATTACTCAATGCAAAAGATCATATCCAAGCAAAGCAATGCTCTAGCTTCTAGGTTCAATCG ACAAGCATTTATTATCTTGGAC 

CDS sequence (LotjaGi3g1v0041300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTCAACTCTTTCATTCCCTTCCTTGTCCTCTCCCTCTTCCTTCTCCATTTCCCTCTCTATGCCGCAAACTTCCACAA GCTCAACCAACTCCAACCAGATTTTCTCGCTGAAGCCACATCCTCTGACGACACAGCACCACCAACTGAGTACTTTGAGG TAACCAGACCCATTGAACTCCCCGAAACAAAACCTTGTTCATACAACGTTCTCCACCATGATTTTGCCTACACATATGGC AAACCCCCAGTTCTTGCAGATTACACCCCTCCCTCTCAGTGCCCATCACAGAAATTCTCCAAGATCGTTCTTGAGTGGAA GTCAACGAGTAAAGGAAGGCAGTTTGATCGCATTTTTGGTGTGTGGCTTGGTGGGGTTGAGCTACTCAGAAGCTGCACAG CAGAGCCAAGAGCTACTGGAACTGTTTGGACAGTTCAAAAGGATATCACAAGGTACCATTCTCTTCTATTGAGTAACCAA ACACTTGCTGTTTATCTGGGCAATATTGTTGATAAAACATATACTGGGGTTTACCATGTTGATATCACTATCCATTTTTA CCCTGATGTTGAGTCAAAGTTTGCTGGTTTAGCATCTGGGAGTGGTTTCCCTGCGGATTTGATCTTGCCCATTTCGAGAA ACCTTCGATTGAATGATGGGTTGTGGTTCCCTATTGTGAATTCTTCTGATGTAGGCTTGAAGGAGTTTAAGGTCCCTCAA AATGCTTATAGGGCTGTGTTGGAGGTTTATGTTTCATTTCATGAGAATGATGAGTCCTGGTATGCCAATCCTACAAATGA ATATCTTTCTGTGAACAATCTTACTGATGCACCTGGGAATGGTCCATTTAGGGAGGTTGAGGTTACTCTTGATGGGAAGG TTGTTGGTGCAGTTTGGCCTTTTACTGTGATTTATACAGGAGGGGTCAATCCTCTCTTGTGGAGACCTATTACTGGGATA GGCTCATTTGATCTTCCATCCTATGATATTGAGGTTACACCCTTTTTGGGGACTATATTGGATGGACAAACCCATTCATT GGAGTTCAGTGTGACTAATGCGTTGAATGTTTGGTTTATAGATGCTAATTTACATCTTTGGTTGGACACAAAGAGTAGTA GAACCGAAGGAGAACTTGTGAGTCTTATTGACAAACCTTTGGTTGAATATCTAGTATCTGATATCAAAGGTTTAAACGGA ACATTCTGGACTAGGGCACAGAGGTCCATTTTGTCTACTGGATGGGTAAAATCCTCCTATGGCAATATCACAACCAGTTT AGTACAAGATTTTGTTTTCCACAATAAATTGGTAATGGGGAAGAATGGGCGTAAGCAAACTGTGAAGCAAACGATTTATT TCAATGACACTGTCCATGCTAAACTTCCATCACCCCTTCTTGATTCTATTGAGGAAACACACAGAAAATTTTCCCTGTAT TTGGCCTCAGATGAATTGGATCAGGATAATGATACTTATTTATCTGTTGAAAATGTTACACTGGGATTTGAAGAGAACAA GTCTAAGAGTGGAGATTTTGGATTTTCAAAGAGCTCTCTCAAAAACATGCAGGATGGCCAGGGCACTATGGTTGTTAGAA AGAATTTGGTTCTTAAGGGACAGGGTGAAACACATCAAGATTATGGATACACAAGCACTGGATATTGCTATTCTAGGAAA GTTGGCAGCTCAAATTACACAATTCTATATGATAAAATCAGAAATTCATGCCAGAAAAGAAGTCACCCTCATTTTGGCCT TAATTTTATGAAAAAGTTGCCCATTATGCTCTAG 

Protein sequence (LotjaGi3g1v0041300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVNSFIPFLVLSLFLLHFPLYAANFHKLNQLQPDFLAEATSSDDTAPPTEYFEVTRPIELPETKPCSYNVLHHDFAYTYG KPPVLADYTPPSQCPSQKFSKIVLEWKSTSKGRQFDRIFGVWLGGVELLRSCTAEPRATGTVWTVQKDITRYHSLLLSNQ TLAVYLGNIVDKTYTGVYHVDITIHFYPDVESKFAGLASGSGFPADLILPISRNLRLNDGLWFPIVNSSDVGLKEFKVPQ NAYRAVLEVYVSFHENDESWYANPTNEYLSVNNLTDAPGNGPFREVEVTLDGKVVGAVWPFTVIYTGGVNPLLWRPITGI GSFDLPSYDIEVTPFLGTILDGQTHSLEFSVTNALNVWFIDANLHLWLDTKSSRTEGELVSLIDKPLVEYLVSDIKGLNG TFWTRAQRSILSTGWVKSSYGNITTSLVQDFVFHNKLVMGKNGRKQTVKQTIYFNDTVHAKLPSPLLDSIEETHRKFSLY LASDELDQDNDTYLSVENVTLGFEENKSKSGDFGFSKSSLKNMQDGQGTMVVRKNLVLKGQGETHQDYGYTSTGYCYSRK VGSSNYTILYDKIRNSCQKRSHPHFGLNFMKKLPIML 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 4 4 -
Phobius 1 22 22 -
SignalP_GRAM_POSITIVE 1 22 22 -
SignalP_EUK 1 22 22 -
Phobius 5 16 12 -
Phobius 17 22 6 -
PANTHER 18 589 572 5.3E-253
PANTHER 18 589 572 5.3E-253
Phobius 23 597 575 -
Pfam 64 460 397 1.2E-108

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0041300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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