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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0042000 |
| Transcript ID | LotjaGi3g1v0042000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphoenolpyruvate carboxylase; TAIR: AT3G14940.1 phosphoenolpyruvate carboxylase 3; Swiss-Prot: sp|Q02909|CAPP1_SOYBN Phosphoenolpyruvate carboxylase, housekeeping isozyme; TrEMBL-Plants: tr|Q8H945|Q8H945_LOTJA Phosphoenolpyruvate carboxylase; Found in the gene: LotjaGi3g1v0042000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4503643..4509221) extracted from Lotus japonicus Gifu genome v1.2.
GTTACAATGGCGAACAGGAACTTGGAGAAGATGGCATCCATTGATGCTCAGCTTCGGCAATTGGTTCCTGCTAAAGTCAG CGAGGATGATAAGCTGGTTGAGTATGATGCTCTGCTACTGGATCGGTTCCTTGATATTCTCCAGGATTTACATGGGGAGG ATCTGAGAGAAACTGTAAGAGCTTTTCACTGATTTTTTAGAGTGTTTGGATTTTCTTTTGGACTTGTTTTTGTGCTTATA ATCAAGTTCCTTTTACTCAACCCTTTGATCCAAAGTGTCTCTATTTTGTTCTGATCGGTTTGGTGAGTGGAAAAGCAAGG GACTTTACATGAATTAAAGGATTTTGGGTACTGGGTTGGGAAGATTGGTTTGGGAAGTTTTAGTGAAACAGAACATGCTT AATGGAATCTTGAGATGGGGAATATTATATGGTCTAATGTTTACTTTTACTTTTAGATTATATTATATATGTACTAATTG TTCCTTTCACTTTGACAGTTGACTCTGCAGTTTCAAATTTGTCAATTAAACACAGGGTTTATGTGTTATGTATTCAAAGT CTAAGTGTTTTAGTTGATAAGCTTTTCATGTTTTTTCTATAGATTTAAGTTGAGTTTATGTTTAGTTTATCTATAAGGAA ATAGTCGGCATCCATCCGAAGGTGACCGGATACTGTGTAGCAGGAGATAGATAGTTAAGTAAGTGTAATGAACTGAGCAA TAGGGAATTGGTGGCCAAGTATTATTGTTAGCTGATTCATTTTATGGTTAGCCCTTAACCTATATATACCAGGTTTTACT GGGATGGAACCAGAGTAATTGAGTTAGGGGTGAAAATTTAACACACTAAGAAAATTTAAGAATGATTCTTTGTGAAAGAC AGTATTAATTTTTGAGGGAACGAATGCAACATTTAGACACTACTACTGTATTAAGAAAAGAATTCTCTCGGGGAGGCGAC GTCCCCATTTTTGGGTCACTTGGGTCCGTCGCTGAGGTTTTACATGCCCTTGCATTTCTCTGACATAATGGTATGGAGAA CAGTTTCAGAGTGATGTTTAATTTTTTCTTATGTAGGTTCAAGAAGTATATGAGCTTTCTGCTGAGTATGAAAGAAAGCA TGAACCTCAGAGACTGGAAGTACTTGGAAATCTGATAACTAGTTTGGACGCTGGAGATTCCATTGTTGTTGCCAAGTCCT TTGCCCACATGCTTAATTTGGCAAACTTAGCTGAAGAGGTCCAGATTGCTCACCGCCGTAGGATCAAGTTGAAAAAGGGG GATTTCGCTGATGAGGGCAATGCAACCACTGAATCAGATATTGAAGAAACTTTCAAGAAACTTGTAGGTGAAATGAAGAA GTCTCCTCAGGAAGTTTTTGATGAACTGAAAAATCAGACTGTTGATCTGGTTCTTACTGCTCATCCTACTCAATCAGTTC GTAGATCTTTGCTGCAGAAGCATGGAAGGTTTGTTTCAAAATTTAGTATTTTTCAGCTTCAGCTCTTTCTTTTTTGTTGC TTTTATGTTATACTTGCGGCAAAGTATAGAAATATTAAGCTATCATCTGCTCCTCTTCTTTACAGGATACGAAATTGCTT AACTCAATTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAGGCTCTACAGAGAGAGGTGAATATTG AAACACATAGGATTGTTGCATCCATGATATTGAAAATATTTTCACGAACAATAGAGAGGAAAGCACCCGCCGATGGTATT TTTCTAAAAATGAATTTTTTTCTTGCTTCTGTTCATGTAGATCCAAGCTGCTTTCCGTACTGATGAAATCAGGAGAACCG CTCCAACACCACAAGATGAAATGAGAGCAGGGATGAGCTACTTTCATGAAACAATTTGGAAGGGTGTGCCCAAATTTCTG CGTCGTGTTGATACAGCTTTGAAGAATATAGGGATTAATGAGCGTGTCCCGTATAATGCTCCACTTATTCAATTTTCTTC TTGGATGGGTGGTGATCGTGATGGTATGGTTTCTATCGTTGACCAACATTATCTCTTATTATAAGAAGAAATGGAGATAT TTGCAAACTATCTTCAAGATGCCGAAACAAAATCCAGTTTGATTACTCAAAACAAAATAATCGTTTTATGAAAAACAATG GAAGAGGTGTTTGTGAAGCTTGAAATTATAAATTCTGCCAGTTTAACATGTAAAATGTCAACTGTTAGTTAGGTCATGTC AGTTAGTTAGTATTAAGCTTCCCTGAAGGTCATGTGTCTAACTATGTTCAATATGATGCAGGCAATCCAAGAGTAACTCC TGAAGTGACAAGGGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCACAGATTGAGGATCTTATGT TTGAAGTAATTAATTAATAGCTCTCCAAATCATTTTAAATAATCATTGTTGATGGTTTATTACTGTGTGCCATTTTGCTG ATTCCCCTTTTTGTTTTTGTAGCTGTCCATGTGGCGCTGCAATGATGAGCTGCGTGTCCGGGCTGAGGAACTTACCAGTT CTTCCAATAAAGATGCAGTTGCAAAACACTACATAGGTATTTACTGAACTTTTTCCTTTTAAATTAAGGAATAGGTGAAA CTTCAGCAGAAACCCCCAAATTATCATATCCAATTTAGGTTGCATTATGATATCCACTCATTTTTTGTGATACTTTTTAC TTAATTCATTATGCAGAGTTTTGGAAAAACATTCCTCCAAGTGAACCGTATCGTGTGGTACTGGGTGAAGTAAGGAACAG ACTCTACCAGACTCGTGAGCGTTCTCGCCATTTGCTTGCTAATGAGTACTCTGACATTCTAGAGGAACACACTTTCACTA ATGTGGAGGAGGTATATTTTTTTGTTTAACTTCCTTAACAAATAATAGTATCCAGCCCAGCTACTGATTGAAGCAGATCA CAAATCATCAATGTTATGCAGTTATTGCCTCCACTGTTTGTAGATTGTGAAAACCTCTCATAACCTGCTCAGCTGTCAAG ACAGTTTGATTTTCTTCAATAAATTTGCAAAGATTGTTGAATTTACTTCAATATTTGCATTACTATTTGTTGTTCAATAT GGTTTGTTAACAATGTTTCATACAGCATATCCTTGTTTCAAACATTTATTCTACTACATTCTAATTTTTGGCTAACGGTT ACTGCCAGCTTTGTTTAGTTCTTGGAACCTCTCAAAAACCATTAAAAATCATTTTGTGATATCTTTTTCATAGATCCTAA CTAAAGTTGAAATTGTGTCTAGTTCTTGGAACCTCTTAAATACCATTAAAACTTATTCTGTGGCTAATATCTATCTCAGA CACTAACTAAAGCTTAAATTTTATCCAGTTCCTGGAACCCCTCGAGCTCTGTTATAGATCACTTTGTGCCTGTGGTGATC GGGCAATTGCTGATGGAAGCCTTCTAGATTTTTTGAGGCAAGTCTCTACTTTTGGACTGTCCCTAGTTAGGCTTGATATT AGGCAAGAGTCCGACCGTCATACTGATGTGCTGGATGCCATCACCAAACATTTGGGAATCGGCTCCTACCTGGAATGGTC TGAAGAAAAGCGGCAGCAATGGCTTTTGTCCGAGTTGAGTGGCAAACGCCCTCTCTTTGGACCTGATCTTCCCCAAACTG AAGAGATCAAAGATGTTCTCGACACATTTCATGTCATAGCAGAACTTCCATCTGATAACTTTGGAGCATATATCATATCA ATGGCAACTGCACCATCTGATGTGCTTGCAGTTGAACTCCTGCAACGTGAATGCCATGTCAAGAATCCGTTAAGAGTCGT CCCATTGTTTGAGAAGCTTGCTGATCTGGAAACAGCTCCCGCTGCTTTGGCTCGGTTGTTCTCCGTTGAGTGGTACCGAA ACCGGATCAACGGGAAACAAGAAGTCATGATTGGCTATTCTGATTCAGGTAAAGATGCTGGAAGGTTCTCTGCAGCGTGG CAGCTATATAAGGCTCAAGAAGAGCTTATTAAGGTAGCTAAGGAATATGGTGTTAAGCTAACAATGTTCCATGGTCGTGG AGGGACTGTCGGCAGAGGAGGCGGTCCTACTCACCTTGCTATCCTGTCTCAGCCTCCAGACACAATCCATGGATCACTCC GTGTTACTGTCCAAGGAGAAGTTATCGAGCAGTCATTTGGAGAGGAGCACTTGTGTTTCAGAACCCTTCAACGTTACACT GCAGCTACTCTAGAACATGGAATGCATCCCCCAATTTCCCCCAAACCAGAATGGCGTGCTTTGATGGACGAGATGGCTGT TATTGCCACTGAGGAATACCGTTCTATTGTATTCAAAGAACCCCGTTTTGTTGAGTATTTCCGCCTGGTAAGATTTCAAC AACAAAAAATCATTTACTTTTTTTCTTTACATTTTATGCTTATTAAATGAACTTGGAAAAGATTTGAGAGTTGTTGTTGA CACTTTCTGAAATGCAGGCTACACCGGAGTTGGAGTATGGCCGAATGAATATTGGAAGTCGGCCGGCAAAGAGAAAGCCT AGTGGAGGCATTGAGACGCTCCGCGCTATACCTTGGATCTTTGCCTGGACACAGACAAGGTTTCACCTTCCAGTGTGGCT AGGGTTTGGGGCTGCATTCAAACATGTGATTGCAAAGGATATCAGAAATCTTAACATGCTGCAAGAGATGTACAATCAAT GGCCTTTCTTTAGGGTCACTATTGATTTAGTGGAAATGGTGTTCGCCAAGGGAGACCCCGGTATAGCTGCTTTGTATGAC AGGCTCCTTGTTTCAGAAGATTTGTGGTCATTTGGGGAACAGTTGAGGACCATGTTTGAAGAAACTAAGCAACTGCTACT TCAGGTAAAGCTACTTCCTTACCATATGACATTTTGTTACAACTCATTTATTAAAATACACACTAGCTGGCAAGTAGTCT CCATTTGCTGTTCAATTTAGCAAATTGGATTTAGCTCCTTCAAAATGAGAAAGTAACTTTAAAGGTAAAGTAAATTATCA CAACCGTGCGTTGACTAAAAAATCAATGCTTGAGATTTAAAGAACACCATTGTTTTCTCAATTAATGGGTGTGATAGCTT ACTTTACCCTATGTAGTGACTCCCTCACTTTATAGTAGCGAAATCCTACCAAATTATATTGTAGTCACTAATTCTTTCTT AAATATTGAACATTTCCTAAGAATGAGAGACTGATTAATTGTTACACAAGCTGATTTTCTTTTTCTGCTGTAATTTTTGT AGGTGGCTGCACACAAGGATCTTCTTGAAGGTGATCCTTACTTGAAACAAAGACTCCGGTTGCGTGATTCTTACATCACT ACCCTCAATGTGTGCCAAGCTTACACATTGAAGCGAATCCGCGATCCGAACTATAATGTGAAGCTACGCCCCCACATCTC TAAAGAGGCTATAGACGTGAGTAAACCTGCGGATGAACTTGTTACTCTGAACCCAACAAGTGAATATGCACCTGGTTTGG AAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCCGGCATGCAAAACACTGGTTAA
CDS sequence (LotjaGi3g1v0042000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAACAGGAACTTGGAGAAGATGGCATCCATTGATGCTCAGCTTCGGCAATTGGTTCCTGCTAAAGTCAGCGAGGA TGATAAGCTGGTTGAGTATGATGCTCTGCTACTGGATCGGTTCCTTGATATTCTCCAGGATTTACATGGGGAGGATCTGA GAGAAACTGTTCAAGAAGTATATGAGCTTTCTGCTGAGTATGAAAGAAAGCATGAACCTCAGAGACTGGAAGTACTTGGA AATCTGATAACTAGTTTGGACGCTGGAGATTCCATTGTTGTTGCCAAGTCCTTTGCCCACATGCTTAATTTGGCAAACTT AGCTGAAGAGGTCCAGATTGCTCACCGCCGTAGGATCAAGTTGAAAAAGGGGGATTTCGCTGATGAGGGCAATGCAACCA CTGAATCAGATATTGAAGAAACTTTCAAGAAACTTGTAGGTGAAATGAAGAAGTCTCCTCAGGAAGTTTTTGATGAACTG AAAAATCAGACTGTTGATCTGGTTCTTACTGCTCATCCTACTCAATCAGTTCGTAGATCTTTGCTGCAGAAGCATGGAAG GATACGAAATTGCTTAACTCAATTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAGGCTCTACAGA GAGAGATCCAAGCTGCTTTCCGTACTGATGAAATCAGGAGAACCGCTCCAACACCACAAGATGAAATGAGAGCAGGGATG AGCTACTTTCATGAAACAATTTGGAAGGGTGTGCCCAAATTTCTGCGTCGTGTTGATACAGCTTTGAAGAATATAGGGAT TAATGAGCGTGTCCCGTATAATGCTCCACTTATTCAATTTTCTTCTTGGATGGGTGGTGATCGTGATGGCAATCCAAGAG TAACTCCTGAAGTGACAAGGGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCACAGATTGAGGAT CTTATGTTTGAACTGTCCATGTGGCGCTGCAATGATGAGCTGCGTGTCCGGGCTGAGGAACTTACCAGTTCTTCCAATAA AGATGCAGTTGCAAAACACTACATAGAGTTTTGGAAAAACATTCCTCCAAGTGAACCGTATCGTGTGGTACTGGGTGAAG TAAGGAACAGACTCTACCAGACTCGTGAGCGTTCTCGCCATTTGCTTGCTAATGAGTACTCTGACATTCTAGAGGAACAC ACTTTCACTAATGTGGAGGAGTTCCTGGAACCCCTCGAGCTCTGTTATAGATCACTTTGTGCCTGTGGTGATCGGGCAAT TGCTGATGGAAGCCTTCTAGATTTTTTGAGGCAAGTCTCTACTTTTGGACTGTCCCTAGTTAGGCTTGATATTAGGCAAG AGTCCGACCGTCATACTGATGTGCTGGATGCCATCACCAAACATTTGGGAATCGGCTCCTACCTGGAATGGTCTGAAGAA AAGCGGCAGCAATGGCTTTTGTCCGAGTTGAGTGGCAAACGCCCTCTCTTTGGACCTGATCTTCCCCAAACTGAAGAGAT CAAAGATGTTCTCGACACATTTCATGTCATAGCAGAACTTCCATCTGATAACTTTGGAGCATATATCATATCAATGGCAA CTGCACCATCTGATGTGCTTGCAGTTGAACTCCTGCAACGTGAATGCCATGTCAAGAATCCGTTAAGAGTCGTCCCATTG TTTGAGAAGCTTGCTGATCTGGAAACAGCTCCCGCTGCTTTGGCTCGGTTGTTCTCCGTTGAGTGGTACCGAAACCGGAT CAACGGGAAACAAGAAGTCATGATTGGCTATTCTGATTCAGGTAAAGATGCTGGAAGGTTCTCTGCAGCGTGGCAGCTAT ATAAGGCTCAAGAAGAGCTTATTAAGGTAGCTAAGGAATATGGTGTTAAGCTAACAATGTTCCATGGTCGTGGAGGGACT GTCGGCAGAGGAGGCGGTCCTACTCACCTTGCTATCCTGTCTCAGCCTCCAGACACAATCCATGGATCACTCCGTGTTAC TGTCCAAGGAGAAGTTATCGAGCAGTCATTTGGAGAGGAGCACTTGTGTTTCAGAACCCTTCAACGTTACACTGCAGCTA CTCTAGAACATGGAATGCATCCCCCAATTTCCCCCAAACCAGAATGGCGTGCTTTGATGGACGAGATGGCTGTTATTGCC ACTGAGGAATACCGTTCTATTGTATTCAAAGAACCCCGTTTTGTTGAGTATTTCCGCCTGGCTACACCGGAGTTGGAGTA TGGCCGAATGAATATTGGAAGTCGGCCGGCAAAGAGAAAGCCTAGTGGAGGCATTGAGACGCTCCGCGCTATACCTTGGA TCTTTGCCTGGACACAGACAAGGTTTCACCTTCCAGTGTGGCTAGGGTTTGGGGCTGCATTCAAACATGTGATTGCAAAG GATATCAGAAATCTTAACATGCTGCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACTATTGATTTAGTGGAAAT GGTGTTCGCCAAGGGAGACCCCGGTATAGCTGCTTTGTATGACAGGCTCCTTGTTTCAGAAGATTTGTGGTCATTTGGGG AACAGTTGAGGACCATGTTTGAAGAAACTAAGCAACTGCTACTTCAGGTGGCTGCACACAAGGATCTTCTTGAAGGTGAT CCTTACTTGAAACAAAGACTCCGGTTGCGTGATTCTTACATCACTACCCTCAATGTGTGCCAAGCTTACACATTGAAGCG AATCCGCGATCCGAACTATAATGTGAAGCTACGCCCCCACATCTCTAAAGAGGCTATAGACGTGAGTAAACCTGCGGATG AACTTGTTACTCTGAACCCAACAAGTGAATATGCACCTGGTTTGGAAGACACCCTCATTCTCACCATGAAGGGTATTGCT GCCGGCATGCAAAACACTGGTTAA
Protein sequence (LotjaGi3g1v0042000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANRNLEKMASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLRETVQEVYELSAEYERKHEPQRLEVLG NLITSLDAGDSIVVAKSFAHMLNLANLAEEVQIAHRRRIKLKKGDFADEGNATTESDIEETFKKLVGEMKKSPQEVFDEL KNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTAPTPQDEMRAGM SYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIED LMFELSMWRCNDELRVRAEELTSSSNKDAVAKHYIEFWKNIPPSEPYRVVLGEVRNRLYQTRERSRHLLANEYSDILEEH TFTNVEEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITKHLGIGSYLEWSEE KRQQWLLSELSGKRPLFGPDLPQTEEIKDVLDTFHVIAELPSDNFGAYIISMATAPSDVLAVELLQRECHVKNPLRVVPL FEKLADLETAPAALARLFSVEWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKEYGVKLTMFHGRGGT VGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRYTAATLEHGMHPPISPKPEWRALMDEMAVIA TEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIAK DIRNLNMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDRLLVSEDLWSFGEQLRTMFEETKQLLLQVAAHKDLLEGD PYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKEAIDVSKPADELVTLNPTSEYAPGLEDTLILTMKGIA AGMQNTG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 967 | 967 | 0.0 | – | |
| PANTHER | 1 | 967 | 967 | 0.0 | ||
| Hamap | 23 | 967 | 945 | 16.759 | ||
| SUPERFAMILY | 33 | 967 | 935 | 0.0 | ||
| Pfam | 163 | 967 | 805 | 4.1E-301 | ||
| PRINTS | 167 | 180 | 14 | 1.2E-82 | ||
| ProSitePatterns | 168 | 179 | 12 | - | ||
| PRINTS | 220 | 236 | 17 | 1.2E-82 | ||
| PRINTS | 280 | 295 | 16 | 1.2E-82 | ||
| Gene3D | 308 | 445 | 138 | 6.7E-56 | – | |
| PRINTS | 442 | 462 | 21 | 1.2E-82 | ||
| PRINTS | 591 | 611 | 21 | 1.2E-82 | ||
| ProSitePatterns | 593 | 605 | 13 | - | ||
| PRINTS | 633 | 662 | 30 | 1.2E-82 | ||
| PRINTS | 765 | 791 | 27 | 1.2E-82 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Phosphoenolpyruvate carboxylase activity | Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + HCO3-. | ||
| Biological process | Carbon fixation | A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates). |
Expression pattern of LotjaGi3g1v0042000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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