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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0042400 |
| Transcript ID | LotjaGi3g1v0042400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT1G53290.1 Galactosyltransferase family protein; Swiss-Prot: sp|Q8L7M1|B3GTE_ARATH Probable beta-1,3-galactosyltransferase 14; TrEMBL-Plants: tr|I1NE03|I1NE03_SOYBN Hexosyltransferase; Found in the gene: LotjaGi3g1v0042400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4538457..4545169) extracted from Lotus japonicus Gifu genome v1.2.
GACTAGTAGGAGCAAAACCTAAGTTGTCATGACCAATAATTCTATGACAATCCCCAAACAAAGAGGAAATAAATGCAAAC CAGAGTTAAAGCAAGTATCCACACGAGCTAAATTATCCGCAAGCGATTTAGCCATCACGATGACCACGCTGAAACCACAT CGACCAGTTGTGATAATCACAAGTAAAGAACTCCAGCCAAATCTCCTACCCCGCTAAAGAATGCCAAAAGGGGGGCCACC GCACTACAATCCCTAAACCGATGCATATAACCCTCTTGATAAGTGTCACAGAGAGAACAAATAGGCAAGTCAGACATATG CCTCCTATGACACTGAAAGTTTGTCAAAACCCCTGATTCAGAAACTGCCACATAAACACACGAACGCGCTGCAACCCCTT AAGACGCCACACCTCCTTCCATATGCAATTGCCATGACCTGCTATCAGACAATCTATAACAAGGTTATAAGCTGACTTCG TGGAAAACCTTCCCCAAGCTTCACCAACCCACACAACTCGATTAGGCTCGCGGGAGGCAATAGGAGCCACAACCACCAAG ACCTCCTACATAAACATGCAAGGTAAAATGTTAGCAAAAAGATAATGTTCAATAATTTTTTATAGTTTACACAACTTAAA TTAAATTCCAAAATGTTTATCAAAATTGCTTTTCATTTCAATATGTCATTTAATGCAATGTAACTTGAGTTAAATTAATT AAAAAAATGAAACAACAACAACAACATAGTTCACCGGTTTTGTTTCCAAGAGTAACCTTCACTGTCAGCGACGGCAACCC ATGAACGAAACATACACTCCGATCCGAGCTCGTGGGATTCCATGAGCTAGCACCACCATGCCTTCCTCCCCAAAATCCTT CTACCCTCGCCACACCACTTTCTCCTCCCGCAGATCCGCCGCCATCCTCGCCGTCTTCCTCCTCGGCGCCGCCGTTCTTC TCTTTCTCCGGCCGTTTCCGGGATCCCGCTGCCTCAACTCACCCCCCAGATCGGTTAGGGTCGTTTGGGAGCACGCCGCC GGCACTGGAGGAAATGGGGTGGCTTCCGATAGGCATAAGGTGATGGGTTTTGTGGGAATTCAAACTGGGTTTGGATCTGT TGGTAGGAGACAATCGTTGAGGAAGACTTGGTTTCCCTCCGATCGCCAAGGCCTTCAACGGTACTCTTCTTCTTCTTCTT CAATGCTTCCCTCATTTCAGTTTTGTTTTCTAGCTGATGAATGCTTCTGTGTTTGTTTATGAGATTTTGAGGAAAAAAGT GTTTTTTATATTTTATATTTGTTGTTAGGATTTTATATAAGATATTTTTTGGTCTCAATTACAAAGTTTTATGAGAATTT TGATATATTGCATCAGTGGCCATGATGAATGTTCTGTACTAGGGCAAGCTTACGTAAGAGAAAGACAAAAAGTAAACCCT AGCAGAGCACTAAAATAGCAAAACTACCATAAAAGGAATATTCTCATTAATGCTGAAAAGTTGGTTTCGTACAAGTGGAT GACCTCCCATTTTATAGAGGGGGTGGTCATGATATGGACCTTTCCTATATTTGGGCCTGACAATCAGGGCCCAAATCCCT GTACATATAAGACAAATCCAAAGGAATCTTCCAGCTGGCTTGTGGGTCCATCATCTAAGGGAGGGCAATGAAGCTCGTTG TGTCGCACTTCCCGCCATGGCTATCTTCAATGGTTTGTTGTTCATTTTGGGCGGGACATAATCTTCTTTATGTCCCGCCC AGTCCAATGAAGTTGTATGATTCTTATTGCTGAACTATCTTTAGGAGGAAATGGTTCAGTTCTTGTTGTATTAAATTATA TAAGAATTAAATATTTTGATTTGTTGAAAATAGTGCAGAGTTCTTAGAAATAGTAATTTTATATTTTTGTTTTAAGAAGA AGTTATATGATTCATACATTTTTGTTTTAATTTTAAATCTTATCCCAAGGATGAAGGATCCTATAGAATATAGTTTTTGA AATGCAATTTAATCATGCACTTGTATTGCGTGGGTCACATTATTTATCTGCGTAGCTTATTGTAGAACCCACCTTGTAGG TGTAAATTTGAATATATAATTGGCGTGAAAGTATGATTCGTGAGTCGTGCTAGGTTCTGCTCTTTATCTGTCTGGCCTGG TTTAGTTTCTATTCAATATGTACATGTGGGTTGCAGTGTGTGTGAGTTAGACAAGGTCGGTTGTTCTGTGTTTTGTTGGT GGGTTTGGGTAATTTGAGGGAAGCTGGGTTTGAAAATGGTGCAACCGTGTATTGTCGTCATCTTTAATTGTTGGCTGTTG CTTTTTGTTGCAGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTGTCATTGGTAGAACAAGTGATACAGCAAAGATG TCTGCGCTTCAGAAGGAAGTTGCAGAATATGATGATTTCATTCAGTTGGATATCCAAGAGGAGTACAGTAAGCTTCCATA CAAAACGTGTGTGCTCAGAATGACTGAATTGCTGTATTTTATCTGTAATGGGTTGCTGAGTTGAATGTTCGTTTATTTCA GGCTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAGTTTTATGTCAAAGCTGATGATGACATATATTTAAGG CCAGGTGAAAGAGTTTTTTAAGGCTTATTGTGATGGAATACATTGCTGAACTTTCCTTATGAGATTTATTTCACCCCTCT AATAAATATTTATGCAAACATTTAATACTTATTGTCAGATCGTCTTTCATTACTACTGGCAAAAGAGCGATCTCACCCCC AGACTTACTTAGGTTGCATGAAAAAGGGGCCCGTGTTCACTGATCCAAAACTCAAATGGTTAGTTTTAATTTTCCTAACT TCACACTTCTGAGCTTGCCTCTATTGCATTTAGGGGAGAGAAAATATGCCATTAATAAGTTGCTTGTTTTGGAATGAGAT TAATATTTAGAAGTTGCAGTCTTTATTTGATGGTACTGTTTGCCTGAGAAAGAAATATATATTTATGAATAATAAGCTCT AGGATTTAAGAATGAATAGTCACTATGGTGAGAGGACAAAGTCAGGAAATTAATTTGCTAACAGTTGTTAGTTTTAAACT TGCAAAAATCTGTGCCAGCCTGATTTTTTTAATTTCTTTTCTTCTTCTTTTTTTGGTCATATTTCTTTTCTTTTTAAGTA CCTTGGAATGTCATACTTCTTCACAATTGTATTCGTAAGAACAAGGTTGGAGAATAAAACTATTGGGTCTAAACTAGATG ATTTGTATATGTATTCATTCAAACATGAGGCATTGTGGTTCACTTTGGTTGATATATAATTTGTCAAAATCATTAGAATA ATAGAATGTTATTATAGTTCTTGAGTAAATTATACTAATAAAATCTTGTAGGTATGAACCACTATCACATTTGCTTGGGA AGGAGTATTTCCTGCATGCGTATGGTCCTATATATGCTCTTTCTGCTGATGTTGTTTCAAGCCTGGTTGCTCTTAGGAAT GACAGGTATGTTCTCTTTCCTCCAGAATGGCCACTTGACTTTCTGTAGACAGTAGGATCACAAATTACTCACCTGCGTCG ATTGCGAACTGCAGAAATACTTGCAGTTGCTGACCCAATTGTTGGTGTTTACATTTCCCCCCTTTTTTTGCATATGTGTT GCAGTCTGCTTTTTCTTTCTCATTTCTTGGATATTGTATATTTATTTTTGTTCATTGGTAATCATCTCTGTTTCACATCT TAATTAAAAATTAAAATAAAAGTTGAGAGACATAAGCCATTTCGTTATACTTTGTCTAGTCACCGGTCCAAATGGATTTG GGAGCTATGCTCTTTATTTTATCATTATCCATCACATAGAGTCGGCGGTAGGGATGTCTCATGCGGTCCTTAGATTCATG GTTTAAACTTGCAGAGAGGGTTAAGTTATCCAAATTTACTCTGTTTACTTCCTTAGGTTTACACCATGGTCATTGAATCA ATGCTCAAATATTTTTGTTAATATAATAGCTATCAAAAATTTTTTTTGATAGGCAAATGTTAGTGGTTAGTTGTTAGTAA TTACAAATGCTCCTCCTCAGGGTTCGAACCCTGGACCTCCATCTCCAACACCTATTTCTACCCTTAGCTCAACCAAGTGA GCTACCCCTCCCACCCCTATAAGAGCTATCAATAAAGTAGCTTCAAATATATCATTGAATTGTTTGGAGCCAATGAACTG GTTTCTTGTTTTCTTTTTCTTAATTGAAATTCATTCATACAGTATCATGCTTTTGAGTTTATGGGGTCTTGAAACTTGTT CACACTTTTCTCTTAATTCAAAGGGCTGAAGATTACAGATAAACATGAATATATGAACCTTGTTCACTACCTACCCCCTT CCCAAATCCAATTTAATATTTGCATTTTTCACAGTTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGTGCTTGGATG CTTGCAATGAATGTCAACCATGAGAATAATCATGAACTCTGTGCTCCAGACTGTACAGCTACATCTGTTGCCGTTTGGGA TATTCCTAAGTGTTCAGGTTGGTGTTTTTGTTTGCACAAAAATGTTGTAGTATCAGTATTTGGGAGTGTTTGCATGAAAG AATTTCTGTGAATACTGAAAACCCAAAAAACATGAAATTCACAAATTGGACTTCAAAAAAACCTCATGGTGAAAAATTGT TTCAAGCTTTTCAATGTTGTACTCTATCTTCCTGTTCATCTGTTCTCTCTACACTGATAAGTAGACGGAGGTAGTACCCA CAAAAGGTAGGGTATATTCCCATCAAATGACTTTGGAGTATGAGTGTGGATAGGGGTGCTACAACATATCTTTTAGTTGA AAAAATATGGGTGGTTGGGGTACTAAAATATGCGTGATGGTTCTAGGTATATAGGTATTAGGTACCTGAGGGGTATGGAT AATGGTTCTAAAGTTGTTATCCATGTTGGTATGGGATCGGGTGCGGTATTTTTTGAGAGTGTAGGAATGAGTAGTATAGT ACCTACTCATTGGTATCCTTACCTCAACATAGTGTTTGGTTGGAGGGGAATGAAGTTAATGGGAGGGGAGGGTTCTTTTA AACGTATCTTGTTTGGTGGGGAATGGACAGGGCTAAAGCCTCTCCTAACTCAATTCTATCTCCCTTCCAAAAGTGTGGGG GTTTGGAGGATAAATAATTCATAATTTTATGCTCTTCCTCATGTTTTGAAACATAAAATTGTTTTTTAAAAGAAGTAATT TGTTTTAAAAGCGCTCTCCTCTCCTAAACCAAACAATAAAGTGGTTGTTTCCCTTCTCTTCCGCTTCCCCTTCTCTTACT TAAACATGATAAGAATTAAAATACTCCTCCTCCGCTCCCCTCCCATCCCCTCCTTTGAATGACATGTTTTTTTCTTAAAA AGACATTTTATTTGAGAGTGGAAGGGATGGGCTCCTAAAGTTTGTAGCACCAAAGCAAAAGATCAAATCTATATTAGGTA CCACCAGCTTATTTGTGAGGGAGTTAAGTACGACCCTATACATATTTGAGGCTTGAATATGATCTCATCAAATGAAAATC TGTTTTTTGCGGAAGTTCTTTTACATGCATTATTTTTAAAAATCTTTAATCAGGCATTGAATGATTTCTCAAAGATATGT GTGTGTATAAAATGTAAACCGAAGGAAAAGATTTTTCTTAATGATTTCTTGGTTCTTGTTTGCGTATAGGCCTCTGTAAT CCAGAAAAGAAAATGCTGGAACTCCATCAAAAGGAAAGCTGCTCTCAGAGCCCAACTCTGGAAGCGGATGATGACTAGAA TATGTGGATGGATATATTATAAAGCAAAGTAAGCAAAGAAAGTGGGAGAGGAATCGCTTATTTTTGTCATTTTTAACTTC CAAAAGATGCTACCACTGCCAATTTTTCGTGTTCATTTTTGAATTTACATTTCTTCCCGTTACAAGACAGGTGATTTTGT TTTCTCTCTCTGTTCCCATCATATTTTCCCCTTTATACTGAGTGTAGCATTGGACGATATGAAGGAGTTTCTATAGGGAT CACTTTTTGTACATGAGAAAATAGATAGACATTATATGGATGATGAAATTTACAAATTTCCTGGTTTTGATGTCATTCTA TTTCAGGATTTTATTCATGTCATACTTTCGAAAAAATGAAATTCTGAATGAATGTGCCTTCTTGCGCATGTGTCATATGG TTATTTCAAGGTTAAGGGGTTCATCTAAATTGGTAAGCCTAGGGTGGACGAAAATAATTTTGGTTCACTGCTGCACCATT GATTAGATACCACTAGATCTAAGATCTCAGCAATATTTTTTAAATGGGTGGTTAAGATTGGTTGAACAATAGAAAGGTAA AAATGAAAACCAACCACCCCTCCTTGCATCAACTGAAGTTGTCGTCTCCTCCACGCTCGTACTTGCCATCGGATGATCTA CCGGCGCACGGTAGATCTCAACATCGACCTCATCCACCATGGTTGACCCTATCTCTTGTCTATACCACAATAGACATGTT AATCACATATACGATTGTTTTCACCAGCATGTCCTTGGTCCTGGGTTATTCCCGTTGATCTCTCCCTTAGTTGTTGGAAA ACCACACCGATCTTGGCCACCAACGCCACACCACTCTTCTCAATTCAGCAAGCCATTCACCCTACACCTGAAT
CDS sequence (LotjaGi3g1v0042400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTTCCTCCCCAAAATCCTTCTACCCTCGCCACACCACTTTCTCCTCCCGCAGATCCGCCGCCATCCTCGCCGTCTT CCTCCTCGGCGCCGCCGTTCTTCTCTTTCTCCGGCCGTTTCCGGGATCCCGCTGCCTCAACTCACCCCCCAGATCGGTTA GGGTCGTTTGGGAGCACGCCGCCGGCACTGGAGGAAATGGGGTGGCTTCCGATAGGCATAAGGTGATGGGTTTTGTGGGA ATTCAAACTGGGTTTGGATCTGTTGGTAGGAGACAATCGTTGAGGAAGACTTGGTTTCCCTCCGATCGCCAAGGCCTTCA ACGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTGTCATTGGTAGAACAAGTGATACAGCAAAGATGTCTGCGCTTC AGAAGGAAGTTGCAGAATATGATGATTTCATTCAGTTGGATATCCAAGAGGAGTACAGTAAGCTTCCATACAAAACGCTA GCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAGTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGA TCGTCTTTCATTACTACTGGCAAAAGAGCGATCTCACCCCCAGACTTACTTAGGTTGCATGAAAAAGGGGCCCGTGTTCA CTGATCCAAAACTCAAATGGTATGAACCACTATCACATTTGCTTGGGAAGGAGTATTTCCTGCATGCGTATGGTCCTATA TATGCTCTTTCTGCTGATGTTGTTTCAAGCCTGGTTGCTCTTAGGAATGACAGTTTCCGGATGTTCAGCAATGAGGATGT TACTATTGGTGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTCTGTGCTCCAGACTGTACAGCTA CATCTGTTGCCGTTTGGGATATTCCTAAGTGTTCAGGCCTCTGTAATCCAGAAAAGAAAATGCTGGAACTCCATCAAAAG GAAAGCTGCTCTCAGAGCCCAACTCTGGAAGCGGATGATGACTAG
Protein sequence (LotjaGi3g1v0042400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSSPKSFYPRHTTFSSRRSAAILAVFLLGAAVLLFLRPFPGSRCLNSPPRSVRVVWEHAAGTGGNGVASDRHKVMGFVG IQTGFGSVGRRQSLRKTWFPSDRQGLQRLEEATGLAFRFVIGRTSDTAKMSALQKEVAEYDDFIQLDIQEEYSKLPYKTL AFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYLGCMKKGPVFTDPKLKWYEPLSHLLGKEYFLHAYGPI YALSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCAPDCTATSVAVWDIPKCSGLCNPEKKMLELHQK ESCSQSPTLEADDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 324 | 324 | 4.3E-172 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 324 | 324 | 4.3E-172 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 21 | 40 | 20 | - | – | |
| Phobius | 41 | 334 | 294 | - | – | |
| Pfam | 90 | 283 | 194 | 3.1E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0042400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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