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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0042400 |
| Transcript ID | LotjaGi3g1v0042400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT1G53290.1 Galactosyltransferase family protein; Swiss-Prot: sp|Q8L7M1|B3GTE_ARATH Probable beta-1,3-galactosyltransferase 14; TrEMBL-Plants: tr|B7FHZ9|B7FHZ9_MEDTR Hexosyltransferase; Found in the gene: LotjaGi3g1v0042400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:4539332..4544312) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTTCCTCCCCAAAATCCTTCTACCCTCGCCACACCACTTTCTCCTCCCGCAGATCCGCCGCCATCCTCGCCGTCTT CCTCCTCGGCGCCGCCGTTCTTCTCTTTCTCCGGCCGTTTCCGGGATCCCGCTGCCTCAACTCACCCCCCAGATCGGTTA GGGTCGTTTGGGAGCACGCCGCCGGCACTGGAGGAAATGGGGTGGCTTCCGATAGGCATAAGGTGATGGGTTTTGTGGGA ATTCAAACTGGGTTTGGATCTGTTGGTAGGAGACAATCGTTGAGGAAGACTTGGTTTCCCTCCGATCGCCAAGGCCTTCA ACGGTACTCTTCTTCTTCTTCTTCAATGCTTCCCTCATTTCAGTTTTGTTTTCTAGCTGATGAATGCTTCTGTGTTTGTT TATGAGATTTTGAGGAAAAAAGTGTTTTTTATATTTTATATTTGTTGTTAGGATTTTATATAAGATATTTTTTGGTCTCA ATTACAAAGTTTTATGAGAATTTTGATATATTGCATCAGTGGCCATGATGAATGTTCTGTACTAGGGCAAGCTTACGTAA GAGAAAGACAAAAAGTAAACCCTAGCAGAGCACTAAAATAGCAAAACTACCATAAAAGGAATATTCTCATTAATGCTGAA AAGTTGGTTTCGTACAAGTGGATGACCTCCCATTTTATAGAGGGGGTGGTCATGATATGGACCTTTCCTATATTTGGGCC TGACAATCAGGGCCCAAATCCCTGTACATATAAGACAAATCCAAAGGAATCTTCCAGCTGGCTTGTGGGTCCATCATCTA AGGGAGGGCAATGAAGCTCGTTGTGTCGCACTTCCCGCCATGGCTATCTTCAATGGTTTGTTGTTCATTTTGGGCGGGAC ATAATCTTCTTTATGTCCCGCCCAGTCCAATGAAGTTGTATGATTCTTATTGCTGAACTATCTTTAGGAGGAAATGGTTC AGTTCTTGTTGTATTAAATTATATAAGAATTAAATATTTTGATTTGTTGAAAATAGTGCAGAGTTCTTAGAAATAGTAAT TTTATATTTTTGTTTTAAGAAGAAGTTATATGATTCATACATTTTTGTTTTAATTTTAAATCTTATCCCAAGGATGAAGG ATCCTATAGAATATAGTTTTTGAAATGCAATTTAATCATGCACTTGTATTGCGTGGGTCACATTATTTATCTGCGTAGCT TATTGTAGAACCCACCTTGTAGGTGTAAATTTGAATATATAATTGGCGTGAAAGTATGATTCGTGAGTCGTGCTAGGTTC TGCTCTTTATCTGTCTGGCCTGGTTTAGTTTCTATTCAATATGTACATGTGGGTTGCAGTGTGTGTGAGTTAGACAAGGT CGGTTGTTCTGTGTTTTGTTGGTGGGTTTGGGTAATTTGAGGGAAGCTGGGTTTGAAAATGGTGCAACCGTGTATTGTCG TCATCTTTAATTGTTGGCTGTTGCTTTTTGTTGCAGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTGTCATTGGTA GAACAAGTGATACAGCAAAGATGTCTGCGCTTCAGAAGGAAGTTGCAGAATATGATGATTTCATTCAGTTGGATATCCAA GAGGAGTACAGTAAGCTTCCATACAAAACGTGTGTGCTCAGAATGACTGAATTGCTGTATTTTATCTGTAATGGGTTGCT GAGTTGAATGTTCGTTTATTTCAGGCTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAGTTTTATGTCAAAG CTGATGATGACATATATTTAAGGCCAGGTGAAAGAGTTTTTTAAGGCTTATTGTGATGGAATACATTGCTGAACTTTCCT TATGAGATTTATTTCACCCCTCTAATAAATATTTATGCAAACATTTAATACTTATTGTCAGATCGTCTTTCATTACTACT GGCAAAAGAGCGATCTCACCCCCAGACTTACTTAGGTTGCATGAAAAAGGGGCCCGTGTTCACTGATCCAAAACTCAAAT GGTTAGTTTTAATTTTCCTAACTTCACACTTCTGAGCTTGCCTCTATTGCATTTAGGGGAGAGAAAATATGCCATTAATA AGTTGCTTGTTTTGGAATGAGATTAATATTTAGAAGTTGCAGTCTTTATTTGATGGTACTGTTTGCCTGAGAAAGAAATA TATATTTATGAATAATAAGCTCTAGGATTTAAGAATGAATAGTCACTATGGTGAGAGGACAAAGTCAGGAAATTAATTTG CTAACAGTTGTTAGTTTTAAACTTGCAAAAATCTGTGCCAGCCTGATTTTTTTAATTTCTTTTCTTCTTCTTTTTTTGGT CATATTTCTTTTCTTTTTAAGTACCTTGGAATGTCATACTTCTTCACAATTGTATTCGTAAGAACAAGGTTGGAGAATAA AACTATTGGGTCTAAACTAGATGATTTGTATATGTATTCATTCAAACATGAGGCATTGTGGTTCACTTTGGTTGATATAT AATTTGTCAAAATCATTAGAATAATAGAATGTTATTATAGTTCTTGAGTAAATTATACTAATAAAATCTTGTAGGTATGA ACCACTATCACATTTGCTTGGGAAGGAGTATTTCCTGCATGCGTATGGTCCTATATATGCTCTTTCTGCTGATGTTGTTT CAAGCCTGGTTGCTCTTAGGAATGACAGGTATGTTCTCTTTCCTCCAGAATGGCCACTTGACTTTCTGTAGACAGTAGGA TCACAAATTACTCACCTGCGTCGATTGCGAACTGCAGAAATACTTGCAGTTGCTGACCCAATTGTTGGTGTTTACATTTC CCCCCTTTTTTTGCATATGTGTTGCAGTCTGCTTTTTCTTTCTCATTTCTTGGATATTGTATATTTATTTTTGTTCATTG GTAATCATCTCTGTTTCACATCTTAATTAAAAATTAAAATAAAAGTTGAGAGACATAAGCCATTTCGTTATACTTTGTCT AGTCACCGGTCCAAATGGATTTGGGAGCTATGCTCTTTATTTTATCATTATCCATCACATAGAGTCGGCGGTAGGGATGT CTCATGCGGTCCTTAGATTCATGGTTTAAACTTGCAGAGAGGGTTAAGTTATCCAAATTTACTCTGTTTACTTCCTTAGG TTTACACCATGGTCATTGAATCAATGCTCAAATATTTTTGTTAATATAATAGCTATCAAAAATTTTTTTTGATAGGCAAA TGTTAGTGGTTAGTTGTTAGTAATTACAAATGCTCCTCCTCAGGGTTCGAACCCTGGACCTCCATCTCCAACACCTATTT CTACCCTTAGCTCAACCAAGTGAGCTACCCCTCCCACCCCTATAAGAGCTATCAATAAAGTAGCTTCAAATATATCATTG AATTGTTTGGAGCCAATGAACTGGTTTCTTGTTTTCTTTTTCTTAATTGAAATTCATTCATACAGTATCATGCTTTTGAG TTTATGGGGTCTTGAAACTTGTTCACACTTTTCTCTTAATTCAAAGGGCTGAAGATTACAGATAAACATGAATATATGAA CCTTGTTCACTACCTACCCCCTTCCCAAATCCAATTTAATATTTGCATTTTTCACAGTTTCCGGATGTTCAGCAATGAGG ATGTTACTATTGGTGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTCTGTGCTCCAGACTGTACA GCTACATCTGTTGCCGTTTGGGATATTCCTAAGTGTTCAGGTTGGTGTTTTTGTTTGCACAAAAATGTTGTAGTATCAGT ATTTGGGAGTGTTTGCATGAAAGAATTTCTGTGAATACTGAAAACCCAAAAAACATGAAATTCACAAATTGGACTTCAAA AAAACCTCATGGTGAAAAATTGTTTCAAGCTTTTCAATGTTGTACTCTATCTTCCTGTTCATCTGTTCTCTCTACACTGA TAAGTAGACGGAGGTAGTACCCACAAAAGGTAGGGTATATTCCCATCAAATGACTTTGGAGTATGAGTGTGGATAGGGGT GCTACAACATATCTTTTAGTTGAAAAAATATGGGTGGTTGGGGTACTAAAATATGCGTGATGGTTCTAGGTATATAGGTA TTAGGTACCTGAGGGGTATGGATAATGGTTCTAAAGTTGTTATCCATGTTGGTATGGGATCGGGTGCGGTATTTTTTGAG AGTGTAGGAATGAGTAGTATAGTACCTACTCATTGGTATCCTTACCTCAACATAGTGTTTGGTTGGAGGGGAATGAAGTT AATGGGAGGGGAGGGTTCTTTTAAACGTATCTTGTTTGGTGGGGAATGGACAGGGCTAAAGCCTCTCCTAACTCAATTCT ATCTCCCTTCCAAAAGTGTGGGGGTTTGGAGGATAAATAATTCATAATTTTATGCTCTTCCTCATGTTTTGAAACATAAA ATTGTTTTTTAAAAGAAGTAATTTGTTTTAAAAGCGCTCTCCTCTCCTAAACCAAACAATAAAGTGGTTGTTTCCCTTCT CTTCCGCTTCCCCTTCTCTTACTTAAACATGATAAGAATTAAAATACTCCTCCTCCGCTCCCCTCCCATCCCCTCCTTTG AATGACATGTTTTTTTCTTAAAAAGACATTTTATTTGAGAGTGGAAGGGATGGGCTCCTAAAGTTTGTAGCACCAAAGCA AAAGATCAAATCTATATTAGGTACCACCAGCTTATTTGTGAGGGAGTTAAGTACGACCCTATACATATTTGAGGCTTGAA TATGATCTCATCAAATGAAAATCTGTTTTTTGCGGAAGTTCTTTTACATGCATTATTTTTAAAAATCTTTAATCAGGCAT TGAATGATTTCTCAAAGATATGTGTGTGTATAAAATGTAAACCGAAGGAAAAGATTTTTCTTAATGATTTCTTGGTTCTT GTTTGCGTATAGGCCTCTGTAATCCAGAAAAGAAAATGCTGGAACTCCATCAAAAGGAAAGCTGCTCTCAGAGCCCAACT CTGGAAGCGGATGATGACTAG
CDS sequence (LotjaGi3g1v0042400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTTCCTCCCCAAAATCCTTCTACCCTCGCCACACCACTTTCTCCTCCCGCAGATCCGCCGCCATCCTCGCCGTCTT CCTCCTCGGCGCCGCCGTTCTTCTCTTTCTCCGGCCGTTTCCGGGATCCCGCTGCCTCAACTCACCCCCCAGATCGGTTA GGGTCGTTTGGGAGCACGCCGCCGGCACTGGAGGAAATGGGGTGGCTTCCGATAGGCATAAGGTGATGGGTTTTGTGGGA ATTCAAACTGGGTTTGGATCTGTTGGTAGGAGACAATCGTTGAGGAAGACTTGGTTTCCCTCCGATCGCCAAGGCCTTCA ACGGCTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAGTTTTATGTCAAAGCTGATGATGACATATATTTAA GGCCAGATCGTCTTTCATTACTACTGGCAAAAGAGCGATCTCACCCCCAGACTTACTTAGGTTGCATGAAAAAGGGGCCC GTGTTCACTGATCCAAAACTCAAATGGTATGAACCACTATCACATTTGCTTGGGAAGGAGTATTTCCTGCATGCGTATGG TCCTATATATGCTCTTTCTGCTGATGTTGTTTCAAGCCTGGTTGCTCTTAGGAATGACAGTTTCCGGATGTTCAGCAATG AGGATGTTACTATTGGTGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTCTGTGCTCCAGACTGT ACAGCTACATCTGTTGCCGTTTGGGATATTCCTAAGTGTTCAGGCCTCTGTAATCCAGAAAAGAAAATGCTGGAACTCCA TCAAAAGGAAAGCTGCTCTCAGAGCCCAACTCTGGAAGCGGATGATGACTAG
Protein sequence (LotjaGi3g1v0042400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSSPKSFYPRHTTFSSRRSAAILAVFLLGAAVLLFLRPFPGSRCLNSPPRSVRVVWEHAAGTGGNGVASDRHKVMGFVG IQTGFGSVGRRQSLRKTWFPSDRQGLQRLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYLGCMKKGP VFTDPKLKWYEPLSHLLGKEYFLHAYGPIYALSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCAPDC TATSVAVWDIPKCSGLCNPEKKMLELHQKESCSQSPTLEADDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 109 | 109 | 1.4E-133 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 109 | 109 | 1.4E-133 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 21 | 40 | 20 | - | – | |
| Phobius | 41 | 283 | 243 | - | – | |
| Pfam | 108 | 232 | 125 | 4.0E-27 | ||
| PANTHER | 109 | 273 | 165 | 1.4E-133 | ||
| PANTHER | 109 | 273 | 165 | 1.4E-133 | – | |
| SUPERFAMILY | 109 | 224 | 116 | 9.98E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0042400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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