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LotjaGi3g1v0045600.1

Overview

Field Value
Gene ID LotjaGi3g1v0045600
Transcript ID LotjaGi3g1v0045600.1
Lotus japonicus genome version Gifu v1.2
Description Ribosomal protein L11 methyltransferase; TAIR: AT5G53920.1 ribosomal protein L11 methyltransferase-like protein; Swiss-Prot: sp|Q81ZZ9|PRMA_NITEU Ribosomal protein L11 methyltransferase; TrEMBL-Plants: tr|I3SP51|I3SP51_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0045600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:4867834..4872841) extracted from Lotus japonicus Gifu genome v1.2.

GAATTTGATTGGAATGATATGATATAAAATGAATTATCCAATTCAAAGCAGCACTCAAATGTCTCACTTCATGTCTGCGC GGCATTTCCTCAAACACCTAACCTGCACTCATCCACCAACCGCCACCATCTCCCGCCGCCTCACAGGTTCACCACCGTCT GCAATCTCATCCCTTCCCATTCTCTTCCACCATCACAAAGTCAGTTACCAATGGCTTCCACATATCCCAATCAACATTCA TGCTGCAGCTGCAAATGCCAAGTTTTCAACAGCTTCTTCTTCTTCCCCTTCTCTACAAGACAAGTCACTGGCTTCACCTC CACCTTATCTTTCGGTTCTGATTCACTGTCCTAAAGATAGTGCGGTAATTCACCATTTTCTTCGGCATTTCCTTCTTCTT TTCAATTTTTACATTGTAATGCTGCTTAATCAGTGAGTGTGTGTGTTCAGAAGTGGAAAAAGTTCAGAGCTTTAACTCAC CCTTGTTTTGAAATTGGTGTATAGTGTCAGAGCAAGTAACTAACTCTAATTTAGTTTCATGGGGTATGAAGAAATCTGAA CCAGTGTTTTTTTTTAGGGGGAAAAAGGTAGTTTATAGGTTTGGAGTAACAATTGTGACATTGGTATATTGCATTGATGA AGTAACTGGAGTTCATGGTTTCTGTTGAAGGAAATGTCAGCTAGACTCTAATAGCGTGTTTATCTTTTGGATTATGTGAT ATGCATGCACCTTGTTATGTTGCCAATTTTTTTGACATTCCCTCCTCTTTGTTCTGACAAGGATGTGCTTGCAGAAGCTC TTTTATGCTTTGGTGCAACTTCTGTTAGCATTGATCAAGATGATGTGTGTCAACGTAGAGATGAGGTAGACTTTTATCTT TTGATTTTGCAGGTTCTTTTTACTTTTAATTTTTTTTCCTTAACATTGTTGCTTTGGATTTTGTTTCTGATGAAAAATTT GGTTTGGTATATTTCAAATGCAATGCTATTTATGATTGTGATAGATTTTCGATCAGAAGACTAATCGAATCTTTAGCAAA GAAAGATGACAATCCATTAAACGAAGAAAGGAGTATAATCATGTTCTCCAATGCACATTAATTATGTTTAGGACAGTGTT ATCTAATATACGCCATGGTGCCGCCATGGCGATTTCTCATGTTGGTTTTTGGCGTTCCGCCATGGCCGAAATCCAGCCAT ATGGCCGCCATATTCCGCCATTATTTGTCATGTATGGCGGGATTTTGGCTTTCCGGCATGACCCGCGATCTGCAATTAAC AACACTGGTTTAGGATATCTAAAGAATTTTATTCTTGGCAGTACAACTATAGAAGGTCATTCAGCATTGCCAATGTAAAT TCAAAATGTGTCATAATCTCCCTATACAGAAACCATAATAATCTTAATTTTACTAGAGAAAACCCCTCACTTAATTTCAT ATACATCTTATTAAATACAATCCTGATTTATTTTAAAACCATCCTAGTTAACCTAAATCCTCAAGTTACATGACATTTGT GTCTATTAATAATAAATATCAATACCAAAATCCTCCAGTACCCTTGAACAATCCCTATCATTCCAGAGATAATAAATTTC AGCCTGTCACTAGACTGGTGCTCATATTGATGACATACTTTGATCAATCTCCTCGTTTAAGGAAATATGGTATTTATTGT TTATGTAATGTTTCACCGTATATTTGATAAATATTTCTGAATTAAATATTGAAACGGTGTACTGTACTGTTTTAGTGTGA GTTCTAAAATAATATATTTTTCTGCAGATTTGCATTAGTTCCATCTTTTCCGAAGGTGAAGATATAAATGTTGGCATTTC GCATGCAGCTGACTCTATTGGCTTGAAAGAGATACCAAGATATGAAGTTAAAGTTAATGAGGAAAATTGGATGAAGAGAG CTCAGGTCAATTTGCTTTGCTTCTTCTGGTCACCTTTTTCTTCATTAGTTGCTCTCTTGTTATGTTACTGAGGTGACTGA ATCTAAAATATGTGCATCAAATTTATTTCTCCCCTGCTATCTAGCCTCTTCATTGTAATATATGTGACAAAGGTTTTGAT GAGAAGGATGTTTTTCTTTGTCTTTCACTCTAAAGGAGGGTGGCAGAATTGCTGTCTCCATCTTCTGTAGTGTATTTTCC CAAATTAGTTATCGTAATTATGGGGTACAAGTGGAATCACAGGAGTGTTCCTCTGTGTGCCAGAAATTGGCTTTTAATGT AAAGTTGTAATCTGTCTCTAATAAAGGAAATTTTGATAGAATGGAATCATTTCTAACTAGTTTTTGCTAAATACTAATTG TTTGCTTTTATCCGGTAGCTGCAGTTTACTGTTTTTTAACCTTAACTTTCTTATATGGGGCATGCTGTTCAATAGGAAAT CATTCATATTGCTGTAAAATTATAATTCTATGATTCGTTATTGAAAATAAACTTACCAAACTTATTTATCTGTGCTTACA GGAATCGTTTTGTCCAGTAGAAGTCACTAAAGACCTATGGGTGGTACCCAAGTGGAGTGCCCCACGGCCACCGGTATTAC CATCTTAAACTTTATTTATGTATCAAGTGTTGCTAGGTTGCTTGCTATGTAGGCCAACTCTATTTATTTGTTTGTTTTTT GCAACTTCTGTAACTATCTATTGCATATGGGTCCTCTTAATTTGAATATTTTGTGTGAGACTAAGGTTGAAAACCATGAA GGAATTTTCTTTTGATAAATCCTGAATTCTGTACAGGATGATAAAGCGACAAATATAATTCTAGATCCTGGGCTAGCTTT TGGAACAGGGGAACATGCCACTACCAAACTATGTCTATTACTCTTACATGGTTGTGTAAAAGGAGGAGAATACATCCTGG ACTATGGCACAGGCACTGGAATTCTTGCCATTGCAGCTCTGAAGGTATTCAGCTGATGATCAGTATACTATAGAATTGAA CTAAAATGAAAACAAATGTTATGGAACTAGAAAACTTAGGAGCATCCTAATGGTCTTTAACCATTTCATCTCGAGTCTCA GTAAGCTGGACTGGAGAACGCAGTCCCGAACTCTAGTTTTATTGAAAATACCTTCACTTGAGCTTAACTTGTGCTATTGA TTACTGCTTCTTTGCAAAGAGCCTAATTTTAACGAATTTACAAGTTTAACATATTACCAGTTTTCATGTACTTTTAGTTA TTTTGTCCTAGTATCTTCAACATAATAAAATGTTTTTGTTGTAAATTTTATTAGAAACTGCTGTGAAGATAATGCATTGA AACAGGGGTAAACAATCCAGGGATCACATGTTATGGTCAGATATGAATAATGAATTTAGACATTATGCATTCATGTAAAT GCTTTGATTTAGATGTGACCTTCTATAATTCTAATACTATGGAAACTGCAAGACGTGCCTATGGGTGAACATCTTTAACT GGAATTACAGTTCATTTATTAAATTTTCATAAATCTAATGCGATATTTTTCTGCCAATTATGCATACCCAGTTATCCATA TATTTGAGTAGGCTAACTTATTTTGATATAATTGCCATTATTTTTAATAGTAACACCATATCTTTCTCTAGAACTTGTTT GTTATGTTTTTCTCATAATAAGCACTTGTTTTTATCCAATACTTTCAAATAACTCCCTTTAACAGCTTTTTCGTATTGTT TACATTATCTATTATGTAGTTGACTCTTCAATTCAAATTTTGATATCTTGTTGCCCTCTCAGTTTGGTGCTGCCTTTGCT GTTGGAGTTGATATAGATTCTGATGCAATTGCATCAGCATCTGAAAATGCTGCCCTGAACAACATTGAACCAGACAAAAT GCAACTGCTCCTTATTGCTAGCGATGCCTCTTCATCCTTCAAGGCTGACTCGAAATCTGGAGTTGTAGAGGGTGAAAGAA CTTGTGAGATACAAACAGTTACCGGCCAGTATAAGTATGATGTGGTCATTGCAAATATGCTCTTAAACCCTTTGTTAGAT CTTGCTGATCAAATTGTCTCTTGTGCGAAGCCTGGAGCAGTTATTGGTCTCTCTGGCATTTTATCTGAACAGGTTATTTA CTTAATGGCCATTATTTTCTTATTTAAAATGCAGCCCTCTCTTAATTGTCCCCTTGGTGGAACTGCTTAATTCCATGATG TACCTGAGTTCATGCCATTGTGCGTTATGCAGGTCCAGTACATCATACAAAGATATTCACCATTCCTAGAAGGCATAGAA GTATCCCACATGGATGAATGGGCCTGCGTGAGTGGCAAAAAGAAATAGGAATTTGAATACGCGCTAACTATATAAGTAAT CAATAGTTCCCAGCTAACCTCTCCTTGCAGCTTGATGTCAGCCATTATATTCTGCGTGACAGATTCTAACATGCTGTTCT AGACTTGGTATGGTTAGAAACCTCTCCAAAATTTCATAAAGTATTTGGTTGTATGTGACTGCTTCTCTCATGTTTCACAA AGCAAGCAAGATAAGTTGGATAAAAGTGTTATTAGGAATTTTAGTTGGCTACACTACAGTTAGCAAAGCCTATAGTGTTT TGCTGCCACAAACTAGAATTAATTATTGATAGTAGCAGGGATGTGCACTTTGTGGAACATAAAGAATGGGATTGGAAATA TAAAAAAAAAATGAAGTATGAAAGAACGAGTTTGTGGATGATGTTCCAATAGAAGGTACTAGATTGCTCTAATGTTTATG AAGATGTAATATAGTTGTGTGTGAACCTGTAGATTATGAAGAAGCAAAGAAAAATAAAAATCGGATTACTATAACAAAGG AGGATTTATCAATAATGAGGATAACCAAACCTAGATATTTATGGAAAGACCTCAAGGAAAAAATATAATTTACGGTCAAG AGGATGGTTGTATTGATAAATACATGACAAGACTTGTGGAGAGAAGTTTTGCTTAGATTTTTTTTTTTTGAATGAACATT GCACCAGTTACTCGATTGGACACCAATGGGCCACTAGTTGTAGCGACG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0045600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATTATCCAATTCAAAGCAGCACTCAAATGTCTCACTTCATGTCTGCGCGGCATTTCCTCAAACACCTAACCTGCAC TCATCCACCAACCGCCACCATCTCCCGCCGCCTCACAGGTTCACCACCGTCTGCAATCTCATCCCTTCCCATTCTCTTCC ACCATCACAAAGTCAGTTACCAATGGCTTCCACATATCCCAATCAACATTCATGCTGCAGCTGCAAATGCCAAGTTTTCA ACAGCTTCTTCTTCTTCCCCTTCTCTACAAGACAAGTCACTGGCTTCACCTCCACCTTATCTTTCGGTTCTGATTCACTG TCCTAAAGATAGTGCGGATGTGCTTGCAGAAGCTCTTTTATGCTTTGGTGCAACTTCTGTTAGCATTGATCAAGATGATG TGTGTCAACGTAGAGATGAGATTTGCATTAGTTCCATCTTTTCCGAAGGTGAAGATATAAATGTTGGCATTTCGCATGCA GCTGACTCTATTGGCTTGAAAGAGATACCAAGATATGAAGTTAAAGTTAATGAGGAAAATTGGATGAAGAGAGCTCAGGA ATCGTTTTGTCCAGTAGAAGTCACTAAAGACCTATGGGTGGTACCCAAGTGGAGTGCCCCACGGCCACCGGATGATAAAG CGACAAATATAATTCTAGATCCTGGGCTAGCTTTTGGAACAGGGGAACATGCCACTACCAAACTATGTCTATTACTCTTA CATGGTTGTGTAAAAGGAGGAGAATACATCCTGGACTATGGCACAGGCACTGGAATTCTTGCCATTGCAGCTCTGAAGTT TGGTGCTGCCTTTGCTGTTGGAGTTGATATAGATTCTGATGCAATTGCATCAGCATCTGAAAATGCTGCCCTGAACAACA TTGAACCAGACAAAATGCAACTGCTCCTTATTGCTAGCGATGCCTCTTCATCCTTCAAGGCTGACTCGAAATCTGGAGTT GTAGAGGGTGAAAGAACTTGTGAGATACAAACAGTTACCGGCCAGTATAAGTATGATGTGGTCATTGCAAATATGCTCTT AAACCCTTTGTTAGATCTTGCTGATCAAATTGTCTCTTGTGCGAAGCCTGGAGCAGTTATTGGTCTCTCTGGCATTTTAT CTGAACAGGTCCAGTACATCATACAAAGATATTCACCATTCCTAGAAGGCATAGAAGTATCCCACATGGATGAATGGGCC TGCGTGAGTGGCAAAAAGAAATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0045600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNYPIQSSTQMSHFMSARHFLKHLTCTHPPTATISRRLTGSPPSAISSLPILFHHHKVSYQWLPHIPINIHAAAANAKFS TASSSSPSLQDKSLASPPPYLSVLIHCPKDSADVLAEALLCFGATSVSIDQDDVCQRRDEICISSIFSEGEDINVGISHA ADSIGLKEIPRYEVKVNEENWMKRAQESFCPVEVTKDLWVVPKWSAPRPPDDKATNIILDPGLAFGTGEHATTKLCLLLL HGCVKGGEYILDYGTGTGILAIAALKFGAAFAVGVDIDSDAIASASENAALNNIEPDKMQLLLIASDASSSFKADSKSGV VEGERTCEIQTVTGQYKYDVVIANMLLNPLLDLADQIVSCAKPGAVIGLSGILSEQVQYIIQRYSPFLEGIEVSHMDEWA CVSGKKK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43648:SF1
99 407 309 9.6E-103 –
PANTHER
PTHR43648
99 407 309 9.6E-103 –
Pfam
PF06325
100 407 308 5.5E-72 –
Hamap
MF_00735
100 406 307 27.704
IPR004498
SUPERFAMILY
SSF53335
171 403 233 3.95E-31
IPR029063
Gene3D
G3DSA:3.40.50.150
188 407 220 7.4E-54 –
CDD
cd02440
250 367 118 2.20306E-9 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006479
Biological process Protein methylation The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.
Subterm of
GO:0008276
Molecular function Protein methyltransferase activity Catalysis of the transfer of a methyl group (CH3-) to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0045600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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