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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0051800 |
Transcript ID | LotjaGi3g1v0051800.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|I1MQP2|I1MQP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0051800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5422788..5429314) extracted from Lotus japonicus Gifu genome v1.2.
CAACTGTTTCCTAAACGAGTGACAACATTCATCGAGACCAAAAGTCTAGTGAATAAAGATCTCGCATGCGCGGGTTTGGG AATGAGTCCCTTGATGACAATCACATTGCAACAACATTTTACTGCCCCCTTCAAGTTTAAGATCTTTGTAAAAAAAATAA AAATAAAAATCTAGTTAAATTTGAGGGGAAAAAAGAGAGCGAAAGATGTTATCTTATAAATCAAAGCAATTAAGACATTC AAGGGTATCAAATCAAAGCCAAGAACAATAGTTTTATCACTTTTTGAGGCATATCTTCTTCCTTTCCTCTCATGTTTTGG GGTCTAATGCATCTAACGTTTTATTCTTAGATTGATGTTTACTCATGTTGATTATGCTATGACATGATATCTTATTTTCT AACAGAACGTTTATACTCAACGTTCTCACATAACGCCAGCTTCCTGGTAAAGTACAAATATCAGAAAACGACATTGATAT GCTTACCTGAGACATGCAAAGAGTGCCAATTCAAACCGATGTGGATTTCATTTGCTATTTTGCTTTCATTCATCACATCT CACCCCATCCCCTCCTATATTTTCTGCTTTTCCTCAACAAAAAAAGATCAATCTCCTCCAGGCAGGGTTCTAGCAGATAG AAGAGGCAGCAACATGGACTCAACACATGAACACAGGTATGGTCTTCTGTTTTCTCATCTAGAAGATTTCTTAGCATTAA ACACTTCTTCATGAAATGCATCTGATGGAGACATCATAACCACAATTCTTTGTAGAGAATTATTTCAGATAAGGGAATCA AAATTATGATTCCTATAACAAGTTTCAAAACTAGCATGCCTTCCTGTATCTAGTTTTGTGGAACCCACTTGAACGTATCT TAGGAGTTGGGACTGCCATTTTTGCTACTTCACTCCTACCCTTGACTTTTATATCCATTGCTTAACAGTGGAAGAGAAAA TAATACAAAATTTTCTTTGCTTTAAAGCCAAAGTAGAAACATGATTTCAACTTACAGATTACTCCTGTCTTTGATCCACT TCTGTGTAAGAAAACTTAGGATAATCACATATATAATGTGGTTCAATAGAGCATCGTAGCCAGGTAACTAGCTCTATGGA AAAACACAAGAGTTTTAGATTAAGCATTATTTCCTTGGTTCTTTTTCTGACTCTTACTAAAAGTTTAAGATCAAGTGCAT TTCATGGCAGTGAATATGAAGATTGGGAAAGCAATCATATGGAGAATTCCATCTTAAGTTATGGGTATGTGTTTGAAAGT TCCTTCCCTCCTCTTGTTAATTCTTAAGTTCCACAAGCACTAAAATATATATGTGGTTTTTATTTTCTTGGTTTAAGGAG TGAAATGGAGGCAGACGAATGGCAGATGGTGAAAACCAAGGGGAACCAATTTGTGGTGAATGACCAACCTTTCTATGTTA ATGGATTCAATACTTACTGGTTAATGGTATTTGCTGCGGATAATTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAACAT GCAGCCTCAGTGGGTATGACAGTTTGCAGGACTTGGGCATTCAATGATGGCGAATGGAGAGCCCTTCAGAAATCCCCATC AGTTTATGATGAAGATGTATTCCAGGTGCTTCCCAAGTGCTTTGTCGTTTTCATTTCTTTTAATATACTTGTTGAGAAAT CTCACATTGACTAAAGATATGGTTACGTACTTACGTAAGTCCTTATAAAGGGCCGAACAATCCTAACCTCTGATCTAGCT TTTGAGGTAGAGCTAGACCGAGTCTATCCAACCTCAGTTTATTGTAGACCACCCATAAATCTCCAGCCCTGTAAATTCCA CGCTCCATATGCTAAGTCCTGGATGTGAGAGTGTATTTAGAAGTCCCACAATAACAAGAGATATGACCTAGTAACTCCTT ATAAAAGGGTAGAGCAATCTTAACCTCTGAACTAGCTTTTGCCTAAGAGTTAGGCCTACTACTTGGTCAGTGTACACTCT ACAACATCCAAATATTAATAACAGCATCATGAATTAGGATTGACTTTTAGTATGATCAACTGTCTGTCACCATTGATTGG AGCATAGTAGATGAGCTAGGCACCAACCTGTATGATGATACTGTTTAACTTCTAGTGATATGCATAGCTGAGTAGCACTC CTCATGCAATTCCATTTTATTTATCACAGGCCCTGGATTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGACTCATA TTATCATTGGTTAACAACTGGGAGGCATATGGTGGCAAAGCACAGTATGTCAAGTGGGGCACTGCTGCTGGTCTTAACTT GACCTCTGATGATGACTTCTTCTCACATCCAACTCTCAGAAGCTACTACAAGGCTCATGCTAAGGCAAGTTCCTCCCAGT GCAAAGACCATAGCCACCTTTTTCATTACTTGGATTTGGATTCTGGAACTTAACCTTGTTTGTGATGTTCTGCAATGCTC AACTCCCTAAAGACTAACTTGGTTTCAAAACTATTTTTCACTGTGTAGACGGTCCTGAATAGAGTTAATACATTCACAAA TATCACTTACAAGGAAGATCCAACAATTTTTGCTTGGGAACTGATGAATGAGCCTCGATGCACCTCAGATCCATCAGGTG ATAAGTTACAGGTTTGACCATTCAAAACCTATGCTTTCCGCCATAAATAAAGATTCTGTGCTATTAACTACATTCAAATA ATCAGTTCATTCCATGATATGACATTTTGCTCTCAACTGAACATATTCTAGGAGTGGATAAAAGAAATGGCATTCTTTGT GAAGAGTATTGATACAAAACACCTGGTGGAGATTGGACTAGAAGGATTTTATGGACCATCGACCCCTCAGAGATTTCAGG TCAACCCAAATTCATTTGCTCAACAGGTTGGAACTGATTTTATCAGGAACCACCAGGTTCTAGGAGTCGATTTCGCTTCT GTTCACATATATCCAGACTCCTGGTAAGTTTTTTCAATAATGACTTTAGAATCAACTCTAGCACCCAGAAGCTACTCACA CAAGCTTCTCCCCTTTAGAGTCAATTAGAGAAGTATTTTCAGACATGCTAACATTATCATAATAGTAAACTTCTGCCAAC AAGTTCTGCAAGCTTTTAATGTTCATCTTACTACCATATTCGTACACACAAGTGCATACAGGAATAATCTAATTATAAAC TACAATTTTTGTCCAACAATGTTATGACACTAAAGCATTACTTCTATGCTTTTACCAATCTTCTAACTTTCTAACATCTG CACTTTAAGACATTAAGATGACAGTTTCTGACTAGGAATTATTTACCTGGTTGAAGGATTTCACAATCAGTTGCCGATAA CCATCTCCCATTTATAATGTCATGGATGGAAGCACATATAGAGGACGCTGAAGAGTATCTTGGAATGCCAGTTGTTTTTG CTGAGTTTGGTGTATCTGCAAAAAGCCCTGGCTACAATTCAACATATAGAAACAACCTTATAAACACTGTGTACAAGACC ATCCTAAACTCTACAAAAAAAGGAGGTAGTGGGGCTGGAAGCCTTGTGTGGCAGCTCTTTCCTGATGGAACAGATTACAT GGATGATGGGTATGCAATTGTTCTCTCAAAATCCCCTTCCACGTCAAGTATGATATCCCTTCAATCCACAAGGCTCGCCC TATTCAATTCCTTATGCTCTAAAACATGCCATTGGGGTTGTAAGAAGAAAAAGGTGTTGGAAAATATAAACTATCACGAT GAACTCTGATACCATATGCGGAAAGTTGCCAATTATAGCCATATAAACATGCATGTTTCTCCTAGTGGATGCAAGAGTGT CAACTCAGTTTGAAAATGGTACAAACAACAAAGGAAGTGAACAGTGGAGACAAACCAGTTTTTAATTATGTCAATAGGTC TTTACTTTGTATGCTCTGACATTTACATGGAAATTTCTAAATAAGCAAGCATTTTAGGTGTGAATTCATTGTTATATTAT TGATAAAAACTAGTTTGAAAGCTATAAGCACCATTTCATACAAGAACAGTACTCCATTGACAGTACCACATGGAATTGAA TACATAATCGCATCTTGGATGTAAGTTTCACCAAACAAGACATGAGATATCTCATTAACGTTGCTGCTCCACTTAGCTGG TATACCTTGTTTCAACCCATAGAACCAAAAGTTATGGTCCTGCCAATCTTTGAGCATTCGCCTCTTGTAGAAAGAAATCA TGAGAATTCTGATTAAGCTCTACAACCAGAAAGTTCTCCTTCTTGAGTTAGTTGTCATACAGATTACACCACAATTATAA ATCTATTCGGCAGCAATACTTTTTAACTTCTTTAAAGAAATAGATTCCTCAGGCTGTGCTGAAATTGTTCTGCCCCTGAT TTAACCTTGCGGAGGATAACCCGAGCAGTGAAAAAAATGGAAAAATAATCTTGTATGTGATGGTTTTCAAAGTTAGGTGC TTGCCGTGGGACACCTCTGAATTCAAATGTGCTCCTCCTGATGGAAATAAATGTTTTGCAATTAAAAGCGGTATGGTCCT TAGACTACAAAATATACATGGCTAACCTTCTAATACATTATAAGTAATCCAATGGCAACAGAAATCTATTTTTTCTGACA CTGAGAAACTACCTTTTGCATCAACGAGCAGTTTTTAACTAACTTTATGATGCAAAAGAGATAGTGTCCATGCAAATCAA AACTTATTCATACTAGTGATTTTCATTATCCTGTTTAATACAGTCAGATATAAAGCAGTTTTTATATTCATCTTTAACTA TCTTGCTTAGTTACATACCATGGAAACAGTAAGATAACTCTAGATACATTTTAAGAAGCCAATTTGGACAGCAGCAAGAG GAAACATAAAATGTTCTGCACAAACTTAAATGTAAAAATCTGAAAGATTTACCAGGGATTTAAAATTGAAAGAGTCAGAA AATGGGATGATATACTCACATTGTTAAGCAGATCATCTTCTGCTTAGGCTTAACTTTGAGAGGACTGCAGCTGCCTGATC ACCACCCAGAAGAAAATAAGGATGTCTCAAAGCAGCAGCAGCAGATAAACGTCCTCTTCTTAAGGAACCTCTCTCAGAGA TAAGCTTTGTTGCAAGGTCCCACCCTCTACCAGATTCATCATCGAGAATTTTAAAGTCAGGTCTCAAGCGAGTATAGTCC CTCCACTTTTTCAAATCGTATCCACAGGTTTTTATTTCCAAATTGAAATTCTTCAAAGCAGCAGGAGACCTTAAGGAAGG TATTGCGATTTGCAGGAGTACAATCCCAGCAGAATACATATCAAACAGATCAGGGCTGTTTAACTACAAAAATAATCACA GAACTCCACTTTAGCAATTCCTATGCAACATGTGTGTGTCGAACGGACAGGGCAAGTGGTTCATTACGTCGATATATGAC TAATAGATTAACCACTCTTTTAGTTAATGTTCCTAAGTTAGGAATATCTCATCTAGGAGTTCCAAAATTGCAATTCACCA AAGAATAATGTTGTTTGTGAAAAGATAATAGTCATTATATTGCTTTAGTTAATGTGAATATGTGATGTATTATTTTATAT TTTCTCTAAAATTGAAAACCCTACAGAAGAAACTTAACTTCGACTACATCAATAAGGTATAAGTAATAAAACCTGCCAGA GGATTGGTGAAAGGAAAGCAGCAACAGGCTCTGGAGGAGGACTTGGTGTTTCTTCTGGGAGTACATACAATTCTGGGGGA CAATAGTCGGGATCCAAAAGCATGCGGTTGGGAACATAATTCTTTCCAATCCGCAGGTCTGTTGCTGCACCAAAATCAAT GAGTTTAATCTGACCCCGTTTGGTAACCACTATGTTGGCTGGCTTTACATCCCTGTGAACGATGCCTGTATTATGAATTT TCTTGAGTGAAGTAATAATCTGGCGCATTATTTGCTTGATGATCAATCCATTTCGTTTTGAAGAGTCTACACCTTGCAAC ACACGTCCAAACATGACAGTTTCTATGTTTGAAGGAAACTTGCGATCTTTCATGTAATCACCAAGAGTAAGATCTCCCTG TGATATGGACAACTCTCCAATTAATGCAAGTTAATGAAGGGCAAAACCAGCTATGAAGATGAATTTTAATTTCTATTTTC AAGATAACATTTAACACCATCCAAACAAAATAATTATAAAAGTCCTGATCATTAAGTAAGGTATGTTTAGGTGATCTAAG GCAATTGTCTATACAATATAAATATCAGCTAAAGCACCTCAAACTTCCAAACAAGCCATTTTCCACCTTTTGTGAACTGT GAGTTTGTTTTATCAGCAACAAAACTTCCAAGGAACTCAGCACATGTTTCAGGTGCTGCTCTAGATAGCCTGTAATTGAA CCACTCCTCATAATCACCAAATTCTTCAGCCCCTTGGATTCCAACCTTAACCTGTGCATTCCATTTGTCAGCAGGAAAAT ACATTTTGTATAGGCTTTCTAATAAAAAATAATGAATAGAAATCCAG
CDS sequence (LotjaGi3g1v0051800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATATCTTATTTTCTAACAGAACGTTTATACTCAACGTTCTCACATAACGCCAGCTTCCTGGTAAAGTACAAATATCA GAAAACGACATTGATATGCTTACCTGAGACATGCAAAGAGTGCCAATTCAAACCGATGTGGATTTCATTTGCTATTTTGC TTTCATTCATCACATCTCACCCCATCCCCTCCTATATTTTCTGCTTTTCCTCAACAAAAAAAGATCAATCTCCTCCAGGC AGGGTTCTAGCAGATAGAAGAGGCAGCAACATGGACTCAACACATGAACACAGTGAATATGAAGATTGGGAAAGCAATCA TATGGAGAATTCCATCTTAAGTTATGGGAGTGAAATGGAGGCAGACGAATGGCAGATGGTGAAAACCAAGGGGAACCAAT TTGTGGTGAATGACCAACCTTTCTATGTTAATGGATTCAATACTTACTGGTTAATGGTATTTGCTGCGGATAATTCCACC AGAGGAAAGGTCACTGAGGTGTTCAAACATGCAGCCTCAGTGGGTATGACAGTTTGCAGGACTTGGGCATTCAATGATGG CGAATGGAGAGCCCTTCAGAAATCCCCATCAGTTTATGATGAAGATGTATTCCAGGCCCTGGATTTTGTGGTAAGTGAAG CAAAGAAATACAAAATCAGACTCATATTATCATTGGTTAACAACTGGGAGGCATATGGTGGCAAAGCACAGTATGTCAAG TGGGGCACTGCTGCTGGTCTTAACTTGACCTCTGATGATGACTTCTTCTCACATCCAACTCTCAGAAGCTACTACAAGGC TCATGCTAAGACGGTCCTGAATAGAGTTAATACATTCACAAATATCACTTACAAGGAAGATCCAACAATTTTTGCTTGGG AACTGATGAATGAGCCTCGATGCACCTCAGATCCATCAGGTGATAAGTTACAGGAGTGGATAAAAGAAATGGCATTCTTT GTGAAGAGTATTGATACAAAACACCTGGTGGAGATTGGACTAGAAGGATTTTATGGACCATCGACCCCTCAGAGATTTCA GGTCAACCCAAATTCATTTGCTCAACAGGTTGGAACTGATTTTATCAGGAACCACCAGGTTCTAGGAGTCGATTTCGCTT CTGTTCACATATATCCAGACTCCTGGATTTCACAATCAGTTGCCGATAACCATCTCCCATTTATAATGTCATGGATGGAA GCACATATAGAGGACGCTGAAGAGTATCTTGGAATGCCAGTTGTTTTTGCTGAGTTTGGTGTATCTGCAAAAAGCCCTGG CTACAATTCAACATATAGAAACAACCTTATAAACACTGTGTACAAGACCATCCTAAACTCTACAAAAAAAGGAGGTAGTG GGGCTGGAAGCCTTGTGTGGCAGCTCTTTCCTGATGGAACAGATTACATGGATGATGGGTATGCAATTGTTCTCTCAAAA TCCCCTTCCACGTCAAGTATGATATCCCTTCAATCCACAAGGCTCGCCCTATTCAATTCCTTATGCTCTAAAACATGCCA TTGGGGTTGTAAGAAGAAAAAGGTGTTGGAAAATATAAACTATCACGATGAACTCTGA
Protein sequence (LotjaGi3g1v0051800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISYFLTERLYSTFSHNASFLVKYKYQKTTLICLPETCKECQFKPMWISFAILLSFITSHPIPSYIFCFSSTKKDQSPPG RVLADRRGSNMDSTHEHSEYEDWESNHMENSILSYGSEMEADEWQMVKTKGNQFVVNDQPFYVNGFNTYWLMVFAADNST RGKVTEVFKHAASVGMTVCRTWAFNDGEWRALQKSPSVYDEDVFQALDFVVSEAKKYKIRLILSLVNNWEAYGGKAQYVK WGTAAGLNLTSDDDFFSHPTLRSYYKAHAKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPSGDKLQEWIKEMAFF VKSIDTKHLVEIGLEGFYGPSTPQRFQVNPNSFAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSVADNHLPFIMSWME AHIEDAEEYLGMPVVFAEFGVSAKSPGYNSTYRNNLINTVYKTILNSTKKGGSGAGSLVWQLFPDGTDYMDDGYAIVLSK SPSTSSMISLQSTRLALFNSLCSKTCHWGCKKKKVLENINYHDEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 72 | 104 | 33 | - | – | |
MobiDBLite | 88 | 104 | 17 | - | – | |
PANTHER | 96 | 525 | 430 | 1.0E-266 | – | |
PANTHER | 96 | 525 | 430 | 1.0E-266 | – | |
Gene3D | 123 | 498 | 376 | 3.2E-135 | – | |
SUPERFAMILY | 126 | 485 | 360 | 1.29E-79 | ||
Pfam | 138 | 440 | 303 | 5.4E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0051800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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