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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001547
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We have found 52 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 7.192s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0076019.1
n.a. Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gi|357483557|ref|XP_003612065.1| chr0 28937468 28950475 +
2 domain predictions
2 GO terms
Lj0g3v0106789.1
n.a. PREDICTED: glucan 1,3-beta-glucosidase A-like [Glycine max] gi|356548252|ref|XP_003542517.1| chr0 45981541 45985073 -
2 domain predictions
2 GO terms
Lj0g3v0125169.1
n.a. PREDICTED: glucan 1,3-beta-glucosidase A-like [Glycine max] gi|356548252|ref|XP_003542517.1| chr0 56177165 56180697 +
2 domain predictions
2 GO terms
Lj0g3v0161729.1
n.a. Oligoribonuclease [Medicago truncatula] gi|357493709|ref|XP_003617143.1| chr0 76121605 76122078 +
2 domain predictions
2 GO terms
Lj0g3v0163099.1
n.a. PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Cicer arietinum] gi|502140084|ref|XP_004504050.1| chr0 77044984 77047306 -
2 domain predictions
2 GO terms
Lj0g3v0164189.1
n.a. PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Glycine max] gi|356542945|ref|XP_003539924.1| chr0 77672520 77677350 -
2 domain predictions
2 GO terms
Lj0g3v0165529.1
n.a. Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gi|357442021|ref|XP_003591288.1| chr0 78617380 78619681 -
2 domain predictions
2 GO terms
Lj0g3v0219689.1
n.a. PREDICTED: probable glucan 1,3-beta-glucosidase A-like isoform X2 [Cicer arietinum] gi|502135628|ref|XP_004502399.1| chr0 112302769 112307940 +
2 domain predictions
2 GO terms
Lj0g3v0219689.2
n.a. Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|357463267|ref|XP_003601915.1| chr0 112302769 112307940 +
2 domain predictions
2 GO terms
Lj0g3v0285999.1
n.a. PREDICTED: endoglucanase-like [Glycine max] gi|356541382|ref|XP_003539156.1| chr0 148520932 148526440 -
2 domain predictions
2 GO terms
Lj0g3v0318099.1
n.a. PREDICTED: glucan 1,3-beta-glucosidase A-like [Glycine max] gi|356548252|ref|XP_003542517.1| chr0 166136192 166140522 +
2 domain predictions
2 GO terms
Lj0g3v0361989.1
n.a. PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] gi|356548266|ref|XP_003542524.1| chr0 190768828 190773897 -
2 domain predictions
2 GO terms
Lj1g3v2126120.1
n.a. PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Glycine max] gi|356518722|ref|XP_003528027.1| chr1 25535463 25539402 +
2 domain predictions
2 GO terms
Lj1g3v2534830.1
n.a. PREDICTED: mannan endo-1,4-beta-mannosidase 6-like [Glycine max] gi|356506646|ref|XP_003522088.1| chr1 29061679 29064118 -
2 domain predictions
2 GO terms
Lj1g3v2996650.1
n.a. Endoglucanase E1 [Medicago truncatula] gi|357502161|ref|XP_003621369.1| chr1 34132784 34134330 -
2 domain predictions
2 GO terms
Lj1g3v4793990.1
n.a. Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gi|357511747|ref|XP_003626162.1| chr1 57792895 57794637 +
2 domain predictions
2 GO terms
Lj2g3v0621500.1
n.a. PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] gi|356525499|ref|XP_003531362.1| chr2 8652414 8653766 +
2 domain predictions
2 GO terms
Lj2g3v1730220.1
n.a. Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gi|357483557|ref|XP_003612065.1| chr2 26687053 26689558 -
2 domain predictions
2 GO terms
Lj3g3v2809350.2
n.a. PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Glycine max] gi|356543835|ref|XP_003540365.1| chr3 34480176 34484999 -
2 domain predictions
2 GO terms
Lj4g3v2717180.1
n.a. PREDICTED: endoglucanase E1-like [Glycine max] gi|356511059|ref|XP_003524249.1| chr4 36618525 36622316 -
2 domain predictions
2 GO terms
Lj4g3v2820020.1
n.a. PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] gi|356525499|ref|XP_003531362.1| chr4 37611645 37614172 +
2 domain predictions
2 GO terms
LotjaGi1g1v0148100.1
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT4G16680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|I1LW02|I1LW02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0148100 LjG1.1_chr1 25310649 25315017 -
2 domain predictions
2 GO terms
LotjaGi1g1v0148300.1
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT5G66460.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|I1LW02|I1LW02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0148300 LjG1.1_chr1 25397427 25402759 -
2 domain predictions
2 GO terms
LotjaGi1g1v0148400.1
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT3G26130.2 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|G7KA50|G7KA50_MEDTR Glycoside hydrolase family 5 protein; Found in the gene: LotjaGi1g1v0148400 LjG1.1_chr1 25419322 25427022 +
2 domain predictions
2 GO terms
LotjaGi1g1v0148400.2
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT3G26130.3 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|G7KA50|G7KA50_MEDTR Glycoside hydrolase family 5 protein; Found in the gene: LotjaGi1g1v0148400 LjG1.1_chr1 25420276 25424202 +
2 domain predictions
2 GO terms
LotjaGi1g1v0421000.1
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G66460.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9FJZ3|MAN7_ARATH Mannan endo-1,4-beta-mannosidase 7; TrEMBL-Plants: tr|A0A072V2A7|A0A072V2A7_MEDTR Mannan endo-1,4-beta-mannosidase-like protein; Found in the gene: LotjaGi1g1v0421000 LjG1.1_chr1 91488633 91496300 +
2 domain predictions
2 GO terms
LotjaGi1g1v0421000.2
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G66460.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9FJZ3|MAN7_ARATH Mannan endo-1,4-beta-mannosidase 7; TrEMBL-Plants: tr|A0A072V2A7|A0A072V2A7_MEDTR Mannan endo-1,4-beta-mannosidase-like protein; Found in the gene: LotjaGi1g1v0421000 LjG1.1_chr1 91488952 91492242 +
2 domain predictions
2 GO terms
LotjaGi1g1v0421000.3
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G66460.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9FJZ3|MAN7_ARATH Mannan endo-1,4-beta-mannosidase 7; TrEMBL-Plants: tr|A0A072V2A7|A0A072V2A7_MEDTR Mannan endo-1,4-beta-mannosidase-like protein; Found in the gene: LotjaGi1g1v0421000 LjG1.1_chr1 91488961 91492030 +
2 domain predictions
2 GO terms
LotjaGi1g1v0458300.1
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|I1N3A5|I1N3A5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0458300 LjG1.1_chr1 96169231 96172912 -
2 domain predictions
2 GO terms
LotjaGi1g1v0458300.2
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|A0A072U0R9|A0A072U0R9_MEDTR Mannan endo-1,4-beta-mannosidase; Found in the gene: LotjaGi1g1v0458300 LjG1.1_chr1 96169532 96172176 -
2 domain predictions
2 GO terms
LotjaGi1g1v0458300.3
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|A0A072U0R9|A0A072U0R9_MEDTR Mannan endo-1,4-beta-mannosidase; Found in the gene: LotjaGi1g1v0458300 LjG1.1_chr1 96169532 96172378 -
2 domain predictions
2 GO terms
LotjaGi1g1v0458300.4
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|A0A072U0R9|A0A072U0R9_MEDTR Mannan endo-1,4-beta-mannosidase; Found in the gene: LotjaGi1g1v0458300 LjG1.1_chr1 96169532 96172418 -
2 domain predictions
2 GO terms
LotjaGi1g1v0458300.5
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|A0A072U0R9|A0A072U0R9_MEDTR Mannan endo-1,4-beta-mannosidase; Found in the gene: LotjaGi1g1v0458300 LjG1.1_chr1 96169532 96172462 -
2 domain predictions
2 GO terms
LotjaGi1g1v0458300.6
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|I1N3A5|I1N3A5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0458300 LjG1.1_chr1 96169532 96172703 -
2 domain predictions
2 GO terms
LotjaGi1g1v0509200.1
n.a. Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|P54583|GUN1_ACIC1 Endoglucanase E1; TrEMBL-Plants: tr|G7L487|G7L487_MEDTR Hydrolyzing O-glycosyl compounds hydrolase; Found in the gene: LotjaGi1g1v0509200 LjG1.1_chr1 102821415 102825078 -
2 domain predictions
2 GO terms
LotjaGi1g1v0750000.1
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT1G02310.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q8L5J1|MAN4_SOLLC Mannan endo-1,4-beta-mannosidase 4; TrEMBL-Plants: tr|K7MZS1|K7MZS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750000 LjG1.1_chr1 132238995 132241264 -
2 domain predictions
2 GO terms
LotjaGi2g1v0387400.1
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G66460.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9FJZ3|MAN7_ARATH Mannan endo-1,4-beta-mannosidase 7; TrEMBL-Plants: tr|G7KF03|G7KF03_MEDTR Mannan endo-1,4-beta-mannosidase-like protein; Found in the gene: LotjaGi2g1v0387400 LjG1.1_chr2 88362598 88378006 -
2 domain predictions
2 GO terms
LotjaGi3g1v0051800.1
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|K7KBV9|K7KBV9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0051800 LjG1.1_chr3 5422788 5429314 -
2 domain predictions
2 GO terms
LotjaGi3g1v0051800.2
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6; TrEMBL-Plants: tr|I1MQP2|I1MQP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0051800 LjG1.1_chr3 5422788 5429314 -
2 domain predictions
2 GO terms
LotjaGi3g1v0379500.1
n.a. Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|P23548|GUN_PAEPO Endoglucanase; TrEMBL-Plants: tr|A0A072TZ08|A0A072TZ08_MEDTR Hydrolyzing O-glycosyl compounds hydrolase; Found in the gene: LotjaGi3g1v0379500 LjG1.1_chr3 77220341 77222851 +
2 domain predictions
2 GO terms
LotjaGi3g1v0379700.1
n.a. Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|P23548|GUN_PAEPO Endoglucanase; TrEMBL-Plants: tr|A0A072TZ08|A0A072TZ08_MEDTR Hydrolyzing O-glycosyl compounds hydrolase; Found in the gene: LotjaGi3g1v0379700 LjG1.1_chr3 77240915 77243285 +
2 domain predictions
2 GO terms
LotjaGi3g1v0444900.1
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT2G20680.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q7Y223|MAN2_ARATH Mannan endo-1,4-beta-mannosidase 2; TrEMBL-Plants: tr|A0A151SEW7|A0A151SEW7_CAJCA Mannan endo-1,4-beta-mannosidase 2; Found in the gene: LotjaGi3g1v0444900 LjG1.1_chr3 85792012 85796964 -
2 domain predictions
2 GO terms
LotjaGi3g1v0453800.1
n.a. Mannan endo-1,4-beta-mannosidase; TAIR: AT2G20680.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q7Y223|MAN2_ARATH Mannan endo-1,4-beta-mannosidase 2; TrEMBL-Plants: tr|I3T2R3|I3T2R3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0453800 LjG1.1_chr3 86724031 86729715 +
2 domain predictions
2 GO terms
LotjaGi4g1v0392100.1
n.a. Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|P54583|GUN1_ACIC1 Endoglucanase E1; TrEMBL-Plants: tr|K7KQT2|K7KQT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392100 LjG1.1_chr4 77065116 77069607 -
2 domain predictions
2 GO terms
LotjaGi4g1v0400000.1
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT3G20080.1 cytochrome P450, family 705, subfamily A, polypeptide 15; Swiss-Prot: sp|Q5B5X8|EXGA_EMENI Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|I1K4L7|I1K4L7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0400000 LjG1.1_chr4 77741315 77745139 -
2 domain predictions
2 GO terms
LotjaGi5g1v0235800.1
n.a. Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT5G66460.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q8L5J1|MAN4_SOLLC Mannan endo-1,4-beta-mannosidase 4; TrEMBL-Plants: tr|I3SU88|I3SU88_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0235800 LjG1.1_chr5 54401077 54404496 -
2 domain predictions
2 GO terms
LotjaGi6g1v0053600.1
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|Q96V64|EXG_BLUGR Glucan 1,3-beta-glucosidase; TrEMBL-Plants: tr|I3SE04|I3SE04_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0053600 LjG1.1_chr6 9606267 9611727 -
2 domain predictions
2 GO terms
LotjaGi6g1v0053600.2
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|Q5B5X8|EXGA_EMENI Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|I3SE04|I3SE04_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0053600 LjG1.1_chr6 9606377 9611328 -
2 domain predictions
2 GO terms
LotjaGi6g1v0090200.1
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|K7MPD7|K7MPD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0090200 LjG1.1_chr6 19339554 19344348 -
2 domain predictions
2 GO terms
LotjaGi6g1v0090200.2
n.a. Glucan 1,3-beta-glucosidase; TAIR: AT5G01930.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|V7D1X4|V7D1X4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0090200 LjG1.1_chr6 19339554 19350111 -
2 domain predictions
2 GO terms