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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0057300 |
| Transcript ID | LotjaGi3g1v0057300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase, putative; TAIR: AT2G44450.1 beta glucosidase 15; Swiss-Prot: sp|O64879|BGL15_ARATH Beta-glucosidase 15; TrEMBL-Plants: tr|G7I6K4|G7I6K4_MEDTR Glycoside hydrolase family 1 protein; Found in the gene: LotjaGi3g1v0057300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5946705..5951432) extracted from Lotus japonicus Gifu genome v1.2.
CCAGTTTTTACTTCTCAAGCACCCCTCGAATGGTGCAAAGCAGAGGCCATTAAGAAATGTAAGCATGGAATTATGGAATC TTTTCTAACCTCTCTCAAGAATAATGACATCTTTTCAATTACTTCAACAAATCCTATCATATCATCATGTAAGAAAACAA TAAAATACAATAAAAGCTAGTTCTCTTTCCTAGAATAATATAGTACTGTAAATGCTTAATAAAAGACAAAGCATTCTTCT TTCCCCTCTTGTGCATATCAAGTCCCTTTTATGTGTGAAAAGTTGAGAGAATTAAAATCAAAATTTGAACAATGTGGATC AAGCTTTCTCTTCTTCTCCTTGCAGCAATTTCCTTTACCCTTTTTGGCTCAGCTGCTTCTCTCAATCGTAGTAGTTTTCC AGCAGGTTTCTTCTTTGGAACAGCTTCTTCAGCTTACCAGGTTTTGTTCTTTCCCATCCCATGTTGTTTGTTTAGCTTCT TTACATCTTTCTATATTAAGTGTTTTGTTAGAATATAACATGTTTGTTGGATCTTATTTACCTCTTTTTTATTTAATGTG ATTGGGGTTTGAAGTATGAGGGTGCTGCAAGGGAAGGTGGCAAGGGTCCAAGCACATGGGACACCTTCACTCATAGCCAC CCAGGTTTGCATCTCCTCTTTTCTTCTTTGTTTCTATATTTTAAGTAGCAATTTAGCATGGTTCTTTGCTTCTATCAGAG CAAGAGCAATCTCCTCTGTTAAGTGTTATCAATACATTCATTTATTAAGATTAGTGCTTATATTATATTGGATTTATTTG CTAGAGGGTATGTTTTGTTGCTAAATTTGAATAGGGCCAGCATAAGTAAATAAAAGAATAAAGATATTTCTGAAATATTT ATTGGGTTGGCATTGAACCATTTTATCAATTTACTTGACCAAATTGATTGTGGGGCTAATATATAGAAAGAAAATACAAA GATGATCATCTGTGTCAACAATATAAGCCATGCTGCTGCTAGGCAAAAAACAAATAAAGGGCAAGGGAAAACTTGGTGCT ATAAAGCTCCCAGCTCGCTATGCGCGAGGCATTGTTGATCTAATGTAGACAACCTTATCTTGTATTTTTGCAAGAGGTTG ATTCCACGGCTGAATCCTGTGACCGCAAAGACACATAGCAACAGCCTCACCGCTGTGCCGAGACTCACCCTCTTAGGCAA AGAACAAATGATTGGAAAAGAACTATTAATAGAAAGGGGGAAAAAGAACTGGCATCATCATTGTTTAGTAATAATTGATA TATGCTAGTGAGTTTATCAGTCCTTTCACATTTTGAATAGAGTCGGTGTACTTAATTGTGCTCAAATATTTAGTGAAACC AACTAAAAATATTGAGACATTTTCTTTGTTCTTTAGATAGAATAGTAGATCGTAGCAATGGAGATGTTGCCATTGATTCA TACCACCGATACAAGGTACTTTCATTCTATTAATTTGAATTTAAAGAGCTTGATGACTTGCCTTAGCTGTTGAGATTTGA TTTCATATAGATGGATGATATTGTTCCCCCCGTCAAAAATTTCAGGAAGATGTGGCCATGATGAAGGATATTGGATTTAA TGCCTACAGGTTTTCCATCTCTTGGTCCAGAGTACTACCTCGTGAGTAACTCTTTTATCATCCTTTTATTATCCTCAGAT TAGTTGTTTGATAAGTAGCTATTTAGCTTTAGGTATGATAAGTTGCTAATTTGCTTCATTAGCTTCCATTCTAGGGGAAT TACAAACACTTTTATTTTATTTCACATTTATATTGGTGTGTTCTATGAAATCAAGCTCAAAGTAAATTGTTTTATAGGTG GAAACCTGAAGGGAGGAATTAACCGAGAAGGCATCACATATTACAACAATCTCATAAATGAATTGGTATCAAATGGTCAG CAGAAGACATTTCTCGCTTTCTTTTTCTTGTTCTTTCCCTTTCTCTCTAATGATACCCCAACTCAAACTAGATTATATGG ACCTTTTTGCTTACAGGACAACAGCCCTTTATAACACTGTTTCACTCTGATCTCCCTCAAGCTCTCGAAGATGAATACGG GGGTTTCTTAAATCCCAAAATTGAGTAAGCTATAGTAAAATTACAATAACGTCTGAAATAGATGGACTCTTTCTTCCCAT TCATTTCCAATGGATGGAAAATTGACAATTTGATTTTGCAAACAGGCAAGACTTTGCAGATTATGCAGAAGTATGCTTTA GAGAATTCGGTGATAGGGTTAAGCATTGGATTACGTTAAATGAGCCAGCACTTACTAGCACTCAGGGTTACGGAAATGGT GGATCCCCACCCCTGAGGTGCTCAAAGTGGGTGGCTAACTGTAGTGCTGGTAATTCTGCTACTGAGCCCTACATAGTTAC ACACAATCTGATTCTTGCTCATGCTGCAGCAGTAAAAGTCTACAGGGAGAAGTTTCAGGTTATAGCATTGCATAGTTATC ATTTTAACTCCAACAGCATATAAAATTTTCTAGAATTTAAGACACATGCTGCAATATATGTGGTTAGTGCAAGATTATCC ACAGTGAATCATTCCCTAACAGATTTCTCAGAAGGGTCAAATTGGGATAACACTAAATTCTGCCTGGGTTGTGCCGCTAT CCCAATCAAAAGATGACATAGAGGCAGCATCGCGTGGTCTTGCTTTTATGTATGACTGGTAAGTGTATTTCCAACTTACA AATGGTCTTGTTTCCAGTTCTGTTACTTTACTAAACAGTTTGTAATTTCATATGTAGCTTTGCTCTGGGATTACTCTGGT GTCCAATTCATATCATTGGCACCAGTGGCTTGGTGAATTATATTGTTTGCTGTTTATGCTTGGTTGACTTCAAACATCTA TTGTGAGAACAAGTATAAATAGCAACCAATAAATGTTTAACCAATATAAACTTATCAAGCTACTGTTATCAAGTTAAAAA ACATGATTCCTGGAGCAATTCCAAGTTTTTTTTAGTAATTTCAGGTACTCAGTAAGCTCTAACTCATCATTTTTGTTTTT CAAGGTTCATGGAACCACTTAACTCTGGTAAATACCCTGCTGTAATGGTTAACAGAGTCGGGAAACGGTTGCCGGAGTTT ACCAGAAGCCAATCCTTAATGGTGAAAGGGTCCTTTGATTTTATAGGGTTAAATTATTACACTTCAACTTATGCAGCCAA TGTACCTTGCCCACGTGGAAAGCCAATGGTCTTTACAGACGCTTGTGTTAGATTTACTAGTAAGTCATTCTAAATGAAGC TTACATGTGCCTTCTATTTAACTTTTATTGACTCATGATCTGTTTTGCTGCACTTGCATCAGCTGCAAGAAATGGGGTCC TCATTGGTCCAAAGGTAATTGAATCTGGAGATAAGTTTTCGCTCGGTTCATATTCTTTGAATGCATAACAATTGATAATT TTGCAGGCTGCCTCAGACTGGCTCTATGTCTATCCACGAGGAATTCAAGGTCTCCTAGAATACACTAAGGAGAAATTTAA CAATCCAATCGTATTCATAACAGAAAATGGTTAGATTGTTTATAATTGAACTTCTCTACCACTTTCTCCCTTAAGTTGAA TCTGTAACTTTACCTTGTTGTGATACTAGTTTTTCTATTTCCATGAATTAAGTTATTCATATATTTGCAGGGATTGATGA GGTTAATGATGGCAAAATGTCACTTGATGATAAAGTGAGGATAGACTATATCCTTCGCCACCTTTTGTATCTTCAAAGGG CCATAAGGTGAGTTTAAAGTGAACATTCCAGTTAGGCTTAGTCGCACTGAAGGTCTTTATAGTCTTTTAAATGTGTAATT TTGGCCCTTATAGTTTCAATTGCTCTAATTAAGTCCTTTCTACTCTCAAAATTGAACAAATATGGTCCTAATTAACATGT CATCCAATAATTAACGAAATATTTTTATTTGGATAATTGTTTTTTACGTCAACAGTTGTGATATATGCCAATTTTTTTCG TTAGCTGTTGGATGACAAGTTAACAAATGGACTAAATTTGTTCAAGATTGAAAGTAGAAGGACTTTATTTGAGCAATTAA AACTATAGGGACCGAAATTACGCATTCCCAAAACTATAGAGACAAAAAATGAAATTAAGTCATTCAGTTGTGGAGTTTAC ACTCTACAACCTCTGCTTCTGCTTTGGACTCAACAATTGGTAACCTACAAACTTTGAATATGGTAGGAATGGAGTGAGGG TGAAGGGATACTTTGCATGGTCATTGTTGGACAATTTTGAATGGACTGCTGGATACACTCTTCGCTTTGGACTCGTCTAT GTGGATTTCAAGAATGGACTGAGAAGATACCATAAAAGATCAGCATTGTGGTTCAAACTATTTCTCCACAACTGAAATGG TGCTCTTGTCTTTCAATCTCCATCCAAGTCTCATTGTCTTGTACGGCATTGGAAGCACCAATTTGGTGAACTCTGATGAG TGGCCAAGACAAGAGTGTGTCTTTGTTATGATATACTAATCTTAATTTGGTTTTGTAGTTAGTTGTCTATGTATCTCCTT ATTTCCTACTAGATGTAGACTAGTGCGTTAATAGACAGAAGTTATTTGGATGATTAAAAAGAAAACACAACTTATTATGA AAGGAAAAATAACTGATGCTATAATTTATAAATAAACTAATTTTTTTAAGAGTAATTAGAGTCATGACAAATATTTTTTT AATAAGAG
CDS sequence (LotjaGi3g1v0057300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGATCAAGCTTTCTCTTCTTCTCCTTGCAGCAATTTCCTTTACCCTTTTTGGCTCAGCTGCTTCTCTCAATCGTAG TAGTTTTCCAGCAGGTTTCTTCTTTGGAACAGCTTCTTCAGCTTACCAGTATGAGGGTGCTGCAAGGGAAGGTGGCAAGG GTCCAAGCACATGGGACACCTTCACTCATAGCCACCCAGATAGAATAGTAGATCGTAGCAATGGAGATGTTGCCATTGAT TCATACCACCGATACAAGGAAGATGTGGCCATGATGAAGGATATTGGATTTAATGCCTACAGGTTTTCCATCTCTTGGTC CAGAGTACTACCTCGTGGAAACCTGAAGGGAGGAATTAACCGAGAAGGCATCACATATTACAACAATCTCATAAATGAAT TGGTATCAAATGGACAACAGCCCTTTATAACACTGTTTCACTCTGATCTCCCTCAAGCTCTCGAAGATGAATACGGGGGT TTCTTAAATCCCAAAATTGAGCAAGACTTTGCAGATTATGCAGAAGTATGCTTTAGAGAATTCGGTGATAGGGTTAAGCA TTGGATTACGTTAAATGAGCCAGCACTTACTAGCACTCAGGGTTACGGAAATGGTGGATCCCCACCCCTGAGGTGCTCAA AGTGGGTGGCTAACTGTAGTGCTGGTAATTCTGCTACTGAGCCCTACATAGTTACACACAATCTGATTCTTGCTCATGCT GCAGCAGTAAAAGTCTACAGGGAGAAGTTTCAGATTTCTCAGAAGGGTCAAATTGGGATAACACTAAATTCTGCCTGGGT TGTGCCGCTATCCCAATCAAAAGATGACATAGAGGCAGCATCGCGTGGTCTTGCTTTTATGTATGACTGGTTCATGGAAC CACTTAACTCTGGTAAATACCCTGCTGTAATGGTTAACAGAGTCGGGAAACGGTTGCCGGAGTTTACCAGAAGCCAATCC TTAATGGTGAAAGGGTCCTTTGATTTTATAGGGTTAAATTATTACACTTCAACTTATGCAGCCAATGTACCTTGCCCACG TGGAAAGCCAATGGTCTTTACAGACGCTTGTGTTAGATTTACTACTGCAAGAAATGGGGTCCTCATTGGTCCAAAGGCTG CCTCAGACTGGCTCTATGTCTATCCACGAGGAATTCAAGGTCTCCTAGAATACACTAAGGAGAAATTTAACAATCCAATC GTATTCATAACAGAAAATGGGATTGATGAGGTTAATGATGGCAAAATGTCACTTGATGATAAAGTGAGGATAGACTATAT CCTTCGCCACCTTTTGTATCTTCAAAGGGCCATAAGGAATGGAGTGAGGGTGAAGGGATACTTTGCATGGTCATTGTTGG ACAATTTTGAATGGACTGCTGGATACACTCTTCGCTTTGGACTCGTCTATGTGGATTTCAAGAATGGACTGAGAAGATAC CATAAAAGATCAGCATTGTGGTTCAAACTATTTCTCCACAACTGA
Protein sequence (LotjaGi3g1v0057300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWIKLSLLLLAAISFTLFGSAASLNRSSFPAGFFFGTASSAYQYEGAAREGGKGPSTWDTFTHSHPDRIVDRSNGDVAID SYHRYKEDVAMMKDIGFNAYRFSISWSRVLPRGNLKGGINREGITYYNNLINELVSNGQQPFITLFHSDLPQALEDEYGG FLNPKIEQDFADYAEVCFREFGDRVKHWITLNEPALTSTQGYGNGGSPPLRCSKWVANCSAGNSATEPYIVTHNLILAHA AAVKVYREKFQISQKGQIGITLNSAWVVPLSQSKDDIEAASRGLAFMYDWFMEPLNSGKYPAVMVNRVGKRLPEFTRSQS LMVKGSFDFIGLNYYTSTYAANVPCPRGKPMVFTDACVRFTTARNGVLIGPKAASDWLYVYPRGIQGLLEYTKEKFNNPI VFITENGIDEVNDGKMSLDDKVRIDYILRHLLYLQRAIRNGVRVKGYFAWSLLDNFEWTAGYTLRFGLVYVDFKNGLRRY HKRSALWFKLFLHN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Phobius | 5 | 17 | 13 | - | – | |
| TMHMM | 5 | 24 | 20 | - | – | |
| Gene3D | 11 | 494 | 484 | 1.0E-212 | – | |
| Phobius | 18 | 21 | 4 | - | – | |
| PANTHER | 20 | 493 | 474 | 6.7E-243 | – | |
| PANTHER | 20 | 493 | 474 | 6.7E-243 | ||
| SUPERFAMILY | 20 | 492 | 473 | 1.25E-182 | ||
| Phobius | 22 | 494 | 473 | - | – | |
| Pfam | 27 | 491 | 465 | 2.4E-157 | ||
| ProSitePatterns | 33 | 47 | 15 | - | ||
| PRINTS | 326 | 340 | 15 | 1.2E-24 | ||
| PRINTS | 401 | 409 | 9 | 1.2E-24 | ||
| PRINTS | 420 | 431 | 12 | 1.2E-24 | ||
| PRINTS | 441 | 458 | 18 | 1.2E-24 | ||
| PRINTS | 465 | 477 | 13 | 1.2E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0057300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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