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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0058600 |
| Transcript ID | LotjaGi3g1v0058600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450 family protein; TAIR: AT2G42250.1 cytochrome P450, family 712, subfamily A, polypeptide 1; Swiss-Prot: sp|Q42798|C93A1_SOYBN 3,9-dihydroxypterocarpan 6A-monooxygenase; TrEMBL-Plants: tr|A0A072TNG7|A0A072TNG7_MEDTR Cytochrome P450 family protein; Found in the gene: LotjaGi3g1v0058600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6167322..6170388) extracted from Lotus japonicus Gifu genome v1.2.
CGAACTATAGTAACAAGGAGTAAGTAGAAAGAGAATAAACAACCTTGCTTAAGCAACGTTGCTTAAATTTAAAGCAACGT TACTTAAGTGCTCCAACTAGATTAAGCGAGTGAAGATACTCTTACATCCTTTCTCCAAATGAGCCCGACCAGAAACACAA GGTCGTGAGAGTCCACGACAAAGCAACCATGATAGAGACACTGTTGCTCCTCCTCTGCCTCTCACCCTTCCTCATAGCTT GCTTTGTCTTCTTCTCCTCCTTCACCACCGTCAAATCCACCACCGCCGCCGCCACCATTCTTCCACCAACCCCACCGTCA CTCCCTTTCATTGGCCACCTCCACCTCCTCTCCACATCCCTCCACAAATCCTTCCAATCCCTCTCATCCAACCACGGCCC CCTCCTCCACCTCCGCCTCGGCCCCTCTCGCCGCCTCCTCCTCGTCTCCTCCGCCGCCACCGCCGCCGAAGTCTTCAAGA CCCACGACCTCGCTTTCTCTTCCCGACCCGCCTTCGCCTTCGCCGAGAGGCTCCCTTACGGCAATTCTGGGTTCATCACC GCCCCTTACGGCCCCTACTGGCGCTTCATGAAGAAGCTCTGCGTCACTGAGCTCCTCAGCGTGCGCCAGTTGGACCGCTC CATGAGGATCAGGAAGGAAGAGATAGAGCGTTCGCTCAAAAGGGTGTTGCAGAATGTGCATGGCAATGTCGCTATTGACT TGGGTGCTGAACTGATGAAGCTCACCAACAATGTCACTTGCAGAATGGCCATGAGCACCAGGTACCACATCCACATGTGG TTTTCCATTCCAGAGTAGATTATCAATTTAGGTCCCGTTTGGGAAAACAGCTTAATTAAGTGCTTATGGTCATAATGGTC ATAAGCGCTTATGCGCGTATTCATAAGCTATTTTAAAAAATTTATTGAAATAAATTGAAAATAAGTTATGAGCATAAGCT CTTTTTCATAAGCAATAGCTTATGAAAATAAGCTCAAAACAGCTTATGGTAGGTCATAAGTTGTTTGCATAAGCTCTTCC AAACACTGACATAAGCGCTTATGCTATCGGATAAGCTCAAATAAGCTCCTCTAAACAGGGTCTTAGTTCCTCAAATTGAG TGAAAACAATCAATTTTAAGAACCCGTTTGGTCTTGAAGGTGTTCGGAGAAATGCGAGGAAGCTGAGAAGATAAGGAAGT TGGTGAAGGAGTCATTTGAGCTTGCTGCAAAGTTGTGCTTTGGTGATGTGTTGGGATGTCTGAAGGAGTTGAGTTTCTGG GTTTATGGGAAAAAGGCTATGGATGTGAGCAGAAGGTATGATGAGTTGCTGGAGAAAGTGCTGAAGGAGCATGAAGAGAA AAGATTATCAGGTGGGGATGGGAATGAGAGTGAGAGGGATTTAGTGGATATTATGTTGGATGTTCATCATGATGCTCAGG CTGAGTTCAAGATCACAAGGACTCATATCAAAGCCTTTTTAATGGTAATTTTCACTTATCATATCCTCCCACTTCGAAAA AATATTCACTGTTATAAGAGTATACACTCTTTGACTCTTCATATATACACATGTGATTGTCCTTGGGCCTGAACGAGATG ATCTCAGATCAAGTAGAATGTGCTCGGCTGAGAATTCGATGATGCAGTGGCTGTGCACGATGGAACACGGTGGTGGAGGT ACATGCAAAAGGCACTCCGACGCTAAGTCATGTTAAGATGAGAGAGAGAAGCTCTTAGCTAAGGAAGAGCAATAATAGAG TAAATGTGTTGTCTGAATAACTTAAGCGTGTGACATAACAAAATGTCCATGTGGCATAACGACTTAATCTTGGTTGAAAC AACTTGACCATGGTTCTAACAACTTAACTTCTATGGTTAAGTCAGCTGGTTAGAATGATGGAAGTTTCGCCTTCCTTTGA CTTTACTATAGAATTGGGTCTGATCGTCCTTGGCCGACCTTGATGACTCTTGGGCCACGTCGTTGGTCATCGGCCCAAAA CAACATGTATAGTTTTTTCCCCTATTATAAAAATCCTTGAGAAAAAAAAAACCATGTCAAAACTGTAGATTTTGAACAGG TATCAAAGAAAGGAGTACTAAGTCGTCCTTTATATTATAGACCCACTTAATATGATTGTTAACAGTTTACAAGAACGTTA GGAGTTGCTTTAGTTTGTCATTGTTAAACTAGTATGTACTTCTGTGGCAGGATCTCTTCATTGCAGGCACAGACACCTCA GCAGAAGCAATGCAATGGGCAATGGCTGAGCTTCTTAACCATCCTGAAGCATTCCAGAAGGTGAGGAATGAGATAGAATC AGTCACTCAAAATGTTAGGCTAGTTGAAGAATCAGATATCCCAAACTTGCCATATCTGCAAGCAGTAGTGAAGGAAACAC TGAGACTATACCCACCAGGACCAGTAACAACAAGAGAATGCCGCCAAGACTGCAAAATAAACTGCTTTGATGTACCAGCA AAAACAGCAGTAGCAGTCAACTTATATGCTATAATGAGGGACCCGGACTCATGGGACGATCCTAACGAGTTCCGCCCTGA AAGGTTCTTGGTTTTCCTGAGAGAACAGGATGATCCAATTGATGATCAGAGTGATGCTAAAAGAATGAGCTTCAATTTTG TTCCATTTGGAGGAGGAAGGAGAGGGTGCCCGGGGACAATGTTGGCATTCAACTTGATGAACACTGCAGTTGCTGCTATG GTGGAGTGCTTTGATTGGAAAATCGGTGAAGATGGGAAAGGAGAAAAGGTTGATATGCAATCTGGATCTGGCATGTCTTT GAACATGCTTCACCCACTCATTTGCATTCCTGTAGTGCATTTTAACCCATTTGATGGATAAATAACTCAATATGTAATAC ACACCCGCTTCTGAAAAACAAAAGTTTGATGAGGAAAACAATGTCTCACTATCCTCAACGACCAAGGGGATTGTATAGCT GATCTAATAATAACCTGTGGTAATTAAAAATTCGGAGGTTTGGATCATGTTCTTTTTAATCAGAATCAATTCTGTGTCAA AATTGATTTTAGCTTTAGGATCCGTTT
CDS sequence (LotjaGi3g1v0058600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAGAGACACTGTTGCTCCTCCTCTGCCTCTCACCCTTCCTCATAGCTTGCTTTGTCTTCTTCTCCTCCTTCACCAC CGTCAAATCCACCACCGCCGCCGCCACCATTCTTCCACCAACCCCACCGTCACTCCCTTTCATTGGCCACCTCCACCTCC TCTCCACATCCCTCCACAAATCCTTCCAATCCCTCTCATCCAACCACGGCCCCCTCCTCCACCTCCGCCTCGGCCCCTCT CGCCGCCTCCTCCTCGTCTCCTCCGCCGCCACCGCCGCCGAAGTCTTCAAGACCCACGACCTCGCTTTCTCTTCCCGACC CGCCTTCGCCTTCGCCGAGAGGCTCCCTTACGGCAATTCTGGGTTCATCACCGCCCCTTACGGCCCCTACTGGCGCTTCA TGAAGAAGCTCTGCGTCACTGAGCTCCTCAGCGTGCGCCAGTTGGACCGCTCCATGAGGATCAGGAAGGAAGAGATAGAG CGTTCGCTCAAAAGGGTGTTGCAGAATGTGCATGGCAATGTCGCTATTGACTTGGGTGCTGAACTGATGAAGCTCACCAA CAATGTCACTTGCAGAATGGCCATGAGCACCAGGATCTCTTCATTGCAGGCACAGACACCTCAGCAGAAGCAATGCAATG GGCAATGGCTGAGCTTCTTAACCATCCTGAAGCATTCCAGAAGGTGA
Protein sequence (LotjaGi3g1v0058600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIETLLLLLCLSPFLIACFVFFSSFTTVKSTTAAATILPPTPPSLPFIGHLHLLSTSLHKSFQSLSSNHGPLLHLRLGPS RRLLLVSSAATAAEVFKTHDLAFSSRPAFAFAERLPYGNSGFITAPYGPYWRFMKKLCVTELLSVRQLDRSMRIRKEEIE RSLKRVLQNVHGNVAIDLGAELMKLTNNVTCRMAMSTRISSLQAQTPQQKQCNGQWLSFLTILKHSRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 34 | 34 | - | – | |
| Phobius | 4 | 22 | 19 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| PANTHER | 15 | 203 | 189 | 7.2E-23 | – | |
| PANTHER | 15 | 203 | 189 | 7.2E-23 | – | |
| Phobius | 23 | 34 | 12 | - | – | |
| Gene3D | 24 | 227 | 204 | 5.0E-37 | ||
| Phobius | 35 | 228 | 194 | - | – | |
| Pfam | 39 | 207 | 169 | 4.0E-17 | ||
| SUPERFAMILY | 39 | 212 | 174 | 1.09E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0058600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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