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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0069400 |
| Transcript ID | LotjaGi3g1v0069400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA binding protein, putative; TAIR: AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|V7AP69|V7AP69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0069400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:7564562..7573144) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCTCTCTACTTTAGGGATTCATGAGATCGGTGTTGTTGTTTAGTGTTTTTTTTTTTCTTCGCGTTTTTGGTAGTTTT TCGATGTAACAATTTTTTTTCTCCTTTTTATAATCTTCTCTATCTTATTTCTAGGGTTTTGCTATCTCCTTTTCACCGCA TTCGAATCTCACACTCTATACAGTGTTTTCTCCATCCCTTTCGATTCCCAATTCTCTCTCAATTCTCAATTGAAAACTGC AAAAGCTTTCTGTTTCAATTCCACTTTCGACTTACGTTTCCGATTCTCCAATCTCGTTGAACCAGTGTTCAATTTAGGGT TTTCCGATCCGCAGAACAAGCTATCTATCACTCAGTGAAATCTAGGGTTTTGTTTCGTTCCGTCAATGCCTCCAAGAACG GTGAAGAGAGGTGCCGCTGCTGGCGGCGGCAAGAGGGGCGGAAGAGGAACCAGGGGAACCCCTAAGGCTGCTCAGAACCA GCAGACCCCTGAACCTGCGGAGGATAAACCAGTTGTCGTGGAGGAGAACAAGGCGGAAGAGAACCCTGTTGTGGAGGAGA AACCGGTTGTCGAAGAGAAGGTTGTTGCTGAAGAAAGTGCTATTGATATGAACCAAATTGCTCCAGAGGCTGGAGAAGAA GCAACCCATGTGCCTAATGGGTCGCCTGTTGCCAAAAGTATGTGACTTTTTCTGTTTTGCTCTTGATTCCTTTGAAATTT TTTCTTGGGTTATTTTCTTGTGAAAATTTGTGGTTTTAGTTCTCATGTGAATATCTTAATCTTTTGTGATTTATGTGGAA ATCACTATGAATGTGTAGTTTTTGATAGATATATTCTCTTATGCATGTGGTTGCTGTATGTCTAAAGCTTGTAATTATGT TTTCCTACTCGCGTCTTATTTGTTACTTGAAGCAAGTGTTCTGGCGATTTGCAAGGGATCGTTTTTAGATAGTATTTTAT TACATAGGTGTGTTTAAATCGTACTAGCCTTTCTCTCGTGAGTTGGAGGACCATTAAATGGGCTGTACATGCTCTGAAGA TGGGTTATTTTTCAATTTGTTTTGGTTCAAGTTCTTGTTCAGTTCATTTGTTCCGTGCTATTAAGGATATAGTATCAACC CGGAATGATGGGGATTGATTATGGAATAAGGTCTGCCTTAATTTGAACAAATACTATGATGTTGGAAAAGCTAAATCTGA TTTGACTGGGATAAATTGAAATCTTTATTTTTTGACAGACGATGAAGAGGAGGTTAAAGAGTCCTTAGATGTTTACGAAA AAGATGAACGTCTTGATTTGGAGGATAATGAACCTGAGTCTGACACGGAGGAGTATGGTGCAGTTGATTATGATGAGAGG GAAATTGAACAAGATGAGGCCCATGTGATGGGAGATGAAGTAGAGGAAGAAGCTGAAGATAATGTAGGTGAAGAAGAGGT TGATACAGGTGAGGAAGAAGTTGAAGGTGCTCATGAACATGAAGAAATTGAGGGTGAAGAGGATGATGAGCATCGTGGCG AGGAGCATGAGCATGAGCATGCAGAGTTGGCTGATGTGGAAGAAGAGGAACACCGTGAAGTTGTGAAGGAGAGAAGAAAG AGGAAAGAATTTGAAGTATTTGTTGGGGGTCTTGATAAGGATGCAACTGAAAGTGATCTGAAGAAGGTTTTCAGCGAAGT TGGGGTTGTTACTGAGGTCAGGCTGATGATGAATCCTCAGACTAAAAGGAACAAGGGATTTGCATTTTTGCGTTTTGAAA CTGTTGAACAAGCAAAGCGAGCTGTAGCAGAGCTGAGAAACCCAGTGGTAATCTTTGATCTTCTCAATAATAGAGTAGAC CTTAAACTGCTGTTGTATTAAATTGTGTGTTTTCATTACCACAATTTCAGATAAATGGCAAACAATGCGGTGTTACTCCA AGTCAGGACAGTGATACCCTCTATTTGGGAAATGTATGCAAGACATGGACAAAAGAAGCTGTAAGTATAATTTTTCGTTC CTATTTTTTAGCACTGTTAGATCTTTAGTTCCTGGTTTGGGTTTGATGGTGATTTCATCTTGAAGTCTGCTGAATTTCTG ACTATTAATGGAACTTCTGGTGCCAGTTAAAGGAGAAGTTGAAACATTATGGAGTTACAAATGTTGAGGATGTGACTGTG GTAGAAGATAGTAATGATGAAGGAAAGAATCGTGGATTTGCTTTCTTAGAATTTTCCTCCCGTTCAGAGGCTATGGATGC CTTTAAGCGACTGCAAAAGAGGGATGTTGTGTTTGGAGTTGATAAGCCAGTGAAGGTTTCCTTCGCAGATTCCTTTATTG ATCCGGGTGATGAAATTATGTCACAGGTATTATTCTGAATATAAATTCGTTGGTTTGCTTGAGGGATTTTAATTAAGTGG AGCCTATGTAAATGGTTCCCTGAGCTTGTTGAAGCATTTTGGGTTTCTGTAAACATCTCTCCTGTTTCCAACACTAATAT TGGTCAATTGTTTGGTTGTTTCTCTCTATAGAAAGTTTTACTTGTACTGCTGATAATTAAATTAGTGATTTCAACCAATT ATATTTACTTTACTGTTATGGGTTGTCAGAATGTTACTCATGTAGTTTTTATGAGCAGGCTAGCTATACTTGTAGTGGTT GGTGTTTCGATGTTAATATAACTCCTTGCTGATGGGTGTATTTAATTTGAAGGTTAAAACTGTATTTATTGATGCACTGC CTCCTTCATGGGATGAGGATTTTGTCCGTGATCTTCTTAAGAAATATGGGGAGATTGAAAAGATTGAGCTCGCCAGGAAC ATGCCAGCTGCTCGCAGGAAAGATTATGGATTTATTACCTTTGGCACACATGATGCTGCTGTAAGATGCGCTGAAAGCAT TACTGGTACAGAACTGGGTGAAGGTGACAAGAAGGTTTGTCTTGGCTTTTGAATTAACTCCATATACACACTGTTAAGTG GGGCATTTTCATCATGCTTTCAGCTTCTTTCAGGCAAAAGTAAGGGCTAGGCTTTCGAGACCCCTTCAAAGAGGCCGTGG AAACATTCGTGGGGACTATCGATCTAGTCGCGGATCTGGAATGATGGCAAGGCCTTCATGGAGCCGACCTGCACCACGTA GTTTTCCATCCCGTGGGGTCAGAGGAATTGTAAGTCGTGTTCCGCCAGTCAGGCCTGTTAGTGCGAGGGATAGACGCCCT GTCATGTCCGTGCCAGTAAGAAGTAGGCCGCTGGCACCTCCAGCTAGAGCTTATGATAGGAGACTGGGTATGTAGTATAC AATTTTTTTTTTTTAATTTTGTAACAGTCTTACTATTTTAATCCCTTCTTTATGATCATTATATACTATTATATTTTCTT CTTAGCTCCTGCTTATCCAAAAAGTAGCTTAAAGAGAGATTATGGTCGGCATGAGGATCTTCCACCTCCAAGAAGTAGAG CTGCTGCTGATTATGGCTCAAGGTTGTCCTCTGAAAGACGCCAATCCTACAGGGATTATCCACCCCGTGATCCTAGCTAC TCAGAGCTCCCTAGAAGTGCTTCTCGTGCTGCTCCTAGGAGAGGTTATGTGGATGATGGCTATAGCCAAAGATTTGAGAG GCCTCCTCCTCCACCTCCTCCCCATCTTAGCTATCGTGAAGTACGCCCCCGTGATTATGATGCTATGTCTGGGTCAAAAC GTTCTTATGCTGCTATGGTTAGTATTATAACTATACTTCTATTCAAATTTTGTTGTTTTGAATCTCATATTTGTTCTGTA TGAGTTTAATTTTGTAAATGAGACTCTTTGCTTTTTTATTTCTAACCAGGATGATGTTCCCCCACGGTACGCGAATACGG GTGTTCGCCAGTCAAGAGCTCGATTGGAATATGACTATGGTGGTAGTGCTTCGCAGTATGGAGATGCTTATGTTGATAGG TTAGTTTCATCTAGAATTCAAGGCTTTTACTTTTCTTTCACCCTAACCCAATTGCTGTCCTGTAATTTAATCCTTACACT TTGATTGGCAGACTTGGAAGGTCCAGCGGGGGATATGGTGGTGGCAGCAGAAGTTCTATTTCTGGTCAAGATTCACATGG GATGTATAGCAGTCGACAGGGCATGAGTTATGGTGGAGGTGAATTTTGCTGCAAGTAGTCTGATTGTTAATGTCAACATC AGAACTTTCTTTTGCTCATATTTTTATTATGTTTTACATGTCAGGCTCTTTTGGTGGTGGTGATGTTGGTGGTATGTACT CATCAAGTTATGGTGGTGATTACAACTCTCGTGGAAGTGATGTAATGATCTTGGCCATTCTGAATCTCAACAAGTATTAG TGTTATTTATGCGTATGGTTTGTTATATTCTTATCTATTACGGTTCCTGTGTTGTAGGTTGGTGGCAGCTCGTATTCATC AATGTATTCTGGCAGGGGCGTGGGTGGTGGTGGTAGCAGTTACATGGGTGGTGGTGGAGGATCGGGATCTTATTATTGAG GTAAGTCATCTGGTAACTCCTTGGCATTGCATTTTCTGGAGTACATCAGGCTGCATTTGATATAAGTGAGAATATATTGT TTAGAGAATCTCTACCCTCGAAATGGCATCTTTTATTTTTCACAAGGGCTGGCGAAGGTTGCACTGTGGTCACCGGTGAA TTTATCTATGGACAGATCTGATATAATGAAGTGGCTGCTATAGGATATCCTTCAAAGCTTATGCAAGTTATGATGCTTAC AATTTGAAGACAAAGGAACTTTGCTCTTTATAGTCTTTCTTTGGACTCATAAAAACTAGGTCTTCTCAATTCAAACTATC TTCGGTCTTCTCTGGAAGGGATGTATTATCAGTTCTTGAGTTGTGCTGTATGGACTCAGTTAAAATGAGATGGAAAAAGA ACTATTGAGCAGTGATGTGTAATTAAACCTTGATTTATGATACTAAACATTGACGGATAATGTGGAAGATACCACACTGC TCCATCTTCCTTTTTTTTGGACAGCAACAAAGGATAGAGCTGCTACTTATTTGGTTAAGGCTTGATGGACTTTTTTTACC TGATGAATTTGTCAAAAAGTTGGTTCTTTTATATGAATTTCTGAAGAGATGTTTAGTTACTTTGGACTATTGTTTTTACT GTGCTGTGATCAGAATTGAAGTGAACTAACCAGCAATTTGTTGAGCTGGTAGGAATAAGACCGCTTCAGCTATTAATAAA GTCGAAAGATTAGTTTCTTGGGATTTATGAGTTGGTGTTTTGGATTTTTCATATGGCATCATCCTAAGTAAAAGGCATGA TGCACTGGTATAATTGTTGATGGATGAGTATGAGTTTTAGTTCTGAGGGGGGATTACGAGACTTTGCTAAAGAAGCATTA ATATCTTAACTAGTTGTCTTCATAGTTTTCCATTTTGCAATGCACTTATTTTTATGCAATTGGTTATCTCCGTTGTCATG GCCGTCAGAAAAGCATTTGCCTCTGGAATATCATTTGGAAATGAACATTCAAGTGATTTGAATAACATGTGTTACTGATG GTTTCTGAATTGAATCTAGTGATTGAAGTGGTCACCTTATCCACTTGGCACCCTTCCCAAAGGCAAAACACGAACTAACA AAAATTGGTCAGGTTGCTGAAGTAAGTGTAAGTAAATGTGGATTTCAACTCCAGTACCACATTGTTGGTGTTAAGTACTG AATGCCCAATTTTTATAGGGGGTCTTAAGCCACTGGAAGCCGTTGTCTATGGAATGTGATCTTATAATGGCGTATTTGAA GTTTACATGTCTTGGAGTGCTTTTCTAGGACTGGTTATTATAAAAATCTTGTTATGAGTTTTTCAAATGTTTTCTATGCT TGGCAATCTGATGAGAATCTTGCCAAAATCAGATTATTTTTCATATGATTTTCCCATGCATTTGACATGAAGTTCCGATG ATTGTTCTGTGAATGTTTGACATTATCATCTAGGGTGGCTATTGTTCTCACATCTTGTGAACTTCCATTTAATTGATATT CACTCTGTGAGGGAGGTGTACTAACCTGTTTTAGTATTAGTTTCCACTTTGTTCTCTGTGCTACTCTGCAGGATCAAAGC TCTCGTGATATCGTTTGGTAAGGTCCCATTTTGCATGTGGAAACTTACTATATTTTTTGTTGTTTAGTTGTACGCTATAC CAATGTTACTAGATTGTTTCATGTTTGATATTGTAAACACCAGGTAAAGTACTAAGTATAGCGTACAGATTCCAATAAAT TGTGATCACGTTGTGCTTTTATTAGGGGCTATAAATTTGATGAAGGGAAACACTTGTTTTTACGATATGAAAACGAAGAG AACCGAATTCATCTCATTGGTTTACCTTTCCTAAATATTAGCAGCTTCACATTGTAATTTTTTTCAAACAGCGTATTATA CAAAGCCAAATAAGCCTTCTTGATTATGGTTAAAAAACTTCCCGTAATATATACCACTTCTCTTTGAAGAAATAGTGTTC ATTTTTCCTTCACTTTTGTTTTTGCTTTATTTGATTTGAATACGGAAGTGAACATTATATTGGTTTTATTATTTGGTGTA AAACTTGGGAAGCAGATGACAAGTTTAAAGATCCATGTATACATGGTTTTTATTATTTATCTTTGAGTTAAACCCTTTTT AATCCTTTAACATTCGTTTGAATTAGTCCAGCCCCTTAAAAATATTTTTTATTTATTAATTTTTTAAATATCAAGTTTGA ATATCTAATAATTTTGACCTTTTACTCATTTAATATTGTGAGTTGTTGGGTGGAGGACTAGATATTGTGCATAGAATAGA AAATAATGAAGTGTGTCCGTTGGGAAGCAAAAATATTTATACTCCCTCCGTTCCAAAACTATTGTAGTTTTAACTTTTTA ATTTTGTTCCAAAACCATTGCTGTTTTACATATCCAAAGCACTTTATCTCATTCTCTTCCATTCATGCCCTCATTTAAAA TTACATCACCCAAGTATCACATCTTAATTCCACCAATCACAATTCTCACAAATTAGTTGACCAATTATTTTCATTCTCTC TCTTTCATATAACTCATATTAAATAAAGGTGTTTCAGTCAAATTATAACATTAATTAATGAATTCTTAATCTTTGTGCAT AACTCTTAAACTACAATAGTTTTGGAACGGAGGGAGTATAACCCAAATGACCATTGAATGTCATTGGCATTGAACGGTCA AAGGCTGTTAACAATATCTAATTATTATGTAGGACAAAAAAAGGTGAAAATCATTAAATATTCCCGTCCATATAAAATTA ATGTGGGATGGAAAACCCTTGTTGGATTTAGAGGTTTTTACATCCCACATGAATTTTATTTGGAATTGTATGTTTAATGA TTTTTCACTTGTTTCTGTCATATATATTAATTAAATTAATGTCATTAAGCCACATTATGGATTTTTAAGTTGAAAAAGTA AATACATTAAGCCACATTAGTGTCTTTGACCGTTCAATGCCAATGACATTCAATTGTCATTTCGGTTATATGAGTCTTTT GGTTCCTAACGCATACACTTCACTATTTTCTATTCTATTTACAATCGAATTTGAATTTCCTTGTTACATGAACCATGTTT TCAGGTCTTGCGTATCAACTAATAAATGCCCTTGAATGTTTGAGCTTGCTCGTAATAACTTTTTTCTTGTAATGTTTTAA TTTCAATGAAAAAAATAATGAGGATTGCACGATCAATGAATTGATTTTTTCAGTGTGCAATCCTCATTATATTTTTCATT GAAATTAAAACATTACAAGAAAATGTTATTACGAACATTTATTTGTTGATACGCAAGACCTGAAAACGTGGTTCATATTA ACAGGAAATTCAAATTATTTGTTGACATGAATATCTGATGATTGTTTTGTGAAAGTTTGACATCATCAATTAGGGTGGCT ATTGTTCTCACATCTTGTGAACTTTCATTTTATTGATATTCACTCTGTGAGGGAGATGTACTAACCTGTTTTAGTATTAG TTTCCACTTTGTTCTGTTTGCTACTCTACAGGATCAAAGCTCTCATGATCTAGTTTGGTAAGGTCCTATTATGCATGTGG AAGTTCACTATGTTTTTTGTTGTTGTTGTTTAGTTGTACGCTATAACAATGTTATCAGATTGTTTCATGTCTGATATTGT AAACACCAGGTGAAGTACTACGTGTAGCGCACAGATTCTAATAAGTTGTGATTGCGTTGTGCTTTTATTTGGGATTATTA ATTTGATGAAGGGAAATGCTTGTTATTTCGAACATGAAGAGAAACGAATTCATCTCATTAGCAGCTTCACATTGTATTCT TTCCTAAAAACGTATTATTTAAAGCCAAATAAGCCTTTTTGAGTTTGGTTAAAAATCTTTCCGTAATATATAGCACTTCT CTTTGATGAAACATTGCGTTCATTTTTCCTTTACTTTTGTTTTCAAAGATCCATAAGTGAATACGGAAGTAAGCATGACT GACATTGCTTTTATTATTTTGGTGTAAATCTTGGAAAATAGATGGCAAGTTATGGAGATCCATATATACATGGTTTTTAT TATTTATCTGCGTTAAACCCTTT
CDS sequence (LotjaGi3g1v0069400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTCCAAGAACGGTGAAGAGAGGTGCCGCTGCTGGCGGCGGCAAGAGGGGCGGAAGAGGAACCAGGGGAACCCCTAA GGCTGCTCAGAACCAGCAGACCCCTGAACCTGCGGAGGATAAACCAGTTGTCGTGGAGGAGAACAAGGCGGAAGAGAACC CTGTTGTGGAGGAGAAACCGGTTGTCGAAGAGAAGGTTGTTGCTGAAGAAAGTGCTATTGATATGAACCAAATTGCTCCA GAGGCTGGAGAAGAAGCAACCCATGTGCCTAATGGGTCGCCTGTTGCCAAAAACGATGAAGAGGAGGTTAAAGAGTCCTT AGATGTTTACGAAAAAGATGAACGTCTTGATTTGGAGGATAATGAACCTGAGTCTGACACGGAGGAGTATGGTGCAGTTG ATTATGATGAGAGGGAAATTGAACAAGATGAGGCCCATGTGATGGGAGATGAAGTAGAGGAAGAAGCTGAAGATAATGTA GGTGAAGAAGAGGTTGATACAGGTGAGGAAGAAGTTGAAGGTGCTCATGAACATGAAGAAATTGAGGGTGAAGAGGATGA TGAGCATCGTGGCGAGGAGCATGAGCATGAGCATGCAGAGTTGGCTGATGTGGAAGAAGAGGAACACCGTGAAGTTGTGA AGGAGAGAAGAAAGAGGAAAGAATTTGAAGTATTTGTTGGGGGTCTTGATAAGGATGCAACTGAAAGTGATCTGAAGAAG GTTTTCAGCGAAGTTGGGGTTGTTACTGAGGTCAGGCTGATGATGAATCCTCAGACTAAAAGGAACAAGGGATTTGCATT TTTGCGTTTTGAAACTGTTGAACAAGCAAAGCGAGCTGTAGCAGAGCTGAGAAACCCAGTGATAAATGGCAAACAATGCG GTGTTACTCCAAGTCAGGACAGTGATACCCTCTATTTGGGAAATGTATGCAAGACATGGACAAAAGAAGCTTTAAAGGAG AAGTTGAAACATTATGGAGTTACAAATGTTGAGGATGTGACTGTGGTAGAAGATAGTAATGATGAAGGAAAGAATCGTGG ATTTGCTTTCTTAGAATTTTCCTCCCGTTCAGAGGCTATGGATGCCTTTAAGCGACTGCAAAAGAGGGATGTTGTGTTTG GAGTTGATAAGCCAGTGAAGGTTTCCTTCGCAGATTCCTTTATTGATCCGGGTGATGAAATTATGTCACAGGTTAAAACT GTATTTATTGATGCACTGCCTCCTTCATGGGATGAGGATTTTGTCCGTGATCTTCTTAAGAAATATGGGGAGATTGAAAA GATTGAGCTCGCCAGGAACATGCCAGCTGCTCGCAGGAAAGATTATGGATTTATTACCTTTGGCACACATGATGCTGCTG TAAGATGCGCTGAAAGCATTACTGGTACAGAACTGGGTGAAGGTGACAAGAAGGCAAAAGTAAGGGCTAGGCTTTCGAGA CCCCTTCAAAGAGGCCGTGGAAACATTCGTGGGGACTATCGATCTAGTCGCGGATCTGGAATGATGGCAAGGCCTTCATG GAGCCGACCTGCACCACGTAGTTTTCCATCCCGTGGGGTCAGAGGAATTGTAAGTCGTGTTCCGCCAGTCAGGCCTGTTA GTGCGAGGGATAGACGCCCTGTCATGTCCGTGCCAGTAAGAAGTAGGCCGCTGGCACCTCCAGCTAGAGCTTATGATAGG AGACTGGCTCCTGCTTATCCAAAAAGTAGCTTAAAGAGAGATTATGGTCGGCATGAGGATCTTCCACCTCCAAGAAGTAG AGCTGCTGCTGATTATGGCTCAAGGTTGTCCTCTGAAAGACGCCAATCCTACAGGGATTATCCACCCCGTGATCCTAGCT ACTCAGAGCTCCCTAGAAGTGCTTCTCGTGCTGCTCCTAGGAGAGGTTATGTGGATGATGGCTATAGCCAAAGATTTGAG AGGCCTCCTCCTCCACCTCCTCCCCATCTTAGCTATCGTGAAGTACGCCCCCGTGATTATGATGCTATGTCTGGGTCAAA ACGTTCTTATGCTGCTATGGATGATGTTCCCCCACGGTACGCGAATACGGGTGTTCGCCAGTCAAGAGCTCGATTGGAAT ATGACTATGGTGGTAGTGCTTCGCAGTATGGAGATGCTTATGTTGATAGACTTGGAAGGTCCAGCGGGGGATATGGTGGT GGCAGCAGAAGTTCTATTTCTGGTCAAGATTCACATGGGATGTATAGCAGTCGACAGGGCATGAGTTATGGTGGAGGCTC TTTTGGTGGTGGTGATGTTGGTGGTATGTACTCATCAAGTTATGGTGGTGATTACAACTCTCGTGGAAGTGATGTAATGA TCTTGGCCATTCTGAATCTCAACAAGTATTAG
Protein sequence (LotjaGi3g1v0069400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPRTVKRGAAAGGGKRGGRGTRGTPKAAQNQQTPEPAEDKPVVVEENKAEENPVVEEKPVVEEKVVAEESAIDMNQIAP EAGEEATHVPNGSPVAKNDEEEVKESLDVYEKDERLDLEDNEPESDTEEYGAVDYDEREIEQDEAHVMGDEVEEEAEDNV GEEEVDTGEEEVEGAHEHEEIEGEEDDEHRGEEHEHEHAELADVEEEEHREVVKERRKRKEFEVFVGGLDKDATESDLKK VFSEVGVVTEVRLMMNPQTKRNKGFAFLRFETVEQAKRAVAELRNPVINGKQCGVTPSQDSDTLYLGNVCKTWTKEALKE KLKHYGVTNVEDVTVVEDSNDEGKNRGFAFLEFSSRSEAMDAFKRLQKRDVVFGVDKPVKVSFADSFIDPGDEIMSQVKT VFIDALPPSWDEDFVRDLLKKYGEIEKIELARNMPAARRKDYGFITFGTHDAAVRCAESITGTELGEGDKKAKVRARLSR PLQRGRGNIRGDYRSSRGSGMMARPSWSRPAPRSFPSRGVRGIVSRVPPVRPVSARDRRPVMSVPVRSRPLAPPARAYDR RLAPAYPKSSLKRDYGRHEDLPPPRSRAAADYGSRLSSERRQSYRDYPPRDPSYSELPRSASRAAPRRGYVDDGYSQRFE RPPPPPPPHLSYREVRPRDYDAMSGSKRSYAAMDDVPPRYANTGVRQSRARLEYDYGGSASQYGDAYVDRLGRSSGGYGG GSRSSISGQDSHGMYSSRQGMSYGGGSFGGGDVGGMYSSSYGGDYNSRGSDVMILAILNLNKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 761 | 761 | 0.0 | – | |
| MobiDBLite | 1 | 61 | 61 | - | – | |
| PANTHER | 1 | 761 | 761 | 0.0 | – | |
| MobiDBLite | 40 | 61 | 22 | - | – | |
| MobiDBLite | 79 | 210 | 132 | - | – | |
| MobiDBLite | 95 | 116 | 22 | - | – | |
| MobiDBLite | 117 | 138 | 22 | - | – | |
| Gene3D | 145 | 302 | 158 | 2.4E-26 | ||
| MobiDBLite | 146 | 188 | 43 | - | – | |
| MobiDBLite | 189 | 210 | 22 | - | – | |
| SUPERFAMILY | 217 | 300 | 84 | 6.18E-24 | ||
| ProSiteProfiles | 222 | 300 | 79 | 17.95 | ||
| SMART | 223 | 296 | 74 | 2.8E-24 | ||
| Pfam | 224 | 292 | 69 | 5.4E-20 | ||
| SUPERFAMILY | 301 | 466 | 166 | 6.49E-28 | ||
| ProSiteProfiles | 302 | 386 | 85 | 14.232 | ||
| SMART | 303 | 382 | 80 | 4.6E-8 | ||
| Gene3D | 303 | 385 | 83 | 3.5E-20 | ||
| Pfam | 304 | 370 | 67 | 8.3E-9 | ||
| CDD | 304 | 382 | 79 | 4.90133E-14 | – | |
| Gene3D | 389 | 494 | 106 | 7.6E-15 | ||
| ProSiteProfiles | 399 | 481 | 83 | 14.112 | ||
| SMART | 400 | 475 | 76 | 8.1E-12 | ||
| Pfam | 401 | 466 | 66 | 1.7E-10 | ||
| CDD | 401 | 475 | 75 | 2.65249E-13 | – | |
| MobiDBLite | 480 | 655 | 176 | - | – | |
| MobiDBLite | 571 | 585 | 15 | - | – | |
| MobiDBLite | 715 | 738 | 24 | - | – | |
| MobiDBLite | 718 | 738 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi3g1v0069400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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