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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0072100 |
| Transcript ID | LotjaGi3g1v0072100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein trigalactosyldiacylglycerol 4, chloroplastic; TAIR: AT2G44640.1 TRIGALACTOSYLDIACYLGLYCEROL-like protein; Swiss-Prot: sp|Q9M903|TGD4_ARATH Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic; TrEMBL-Plants: tr|I1JMJ6|I1JMJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0072100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:7833680..7838988) extracted from Lotus japonicus Gifu genome v1.2.
AGGTTAAACCTCAACAAACACAAAACCCCTTAACCTCAGTCCTCAGCTGACATTGTTGCTGCATAGGAACCAAACCAAAA AGCACACACTACCTCATCATCAATGGCGAAGCTTCGAACAGCCATTGATTCTGCGTTCTGGGACTTGAACATTGCATCCC CTCAGTCCCTAGATGGTTGGGCTAAGGCTGTTCCAGGAGACCCTATTCCTCTTGACGGTTCTGTTGCAAGCAAAGCTCTT CGCCCTCAGCAATTCTCATTCTTCAAGAACAATAGCTTCCCTCTTCCTGTAATCCCTTCTTTCTCTCCCACTTCTCCTAA GGATTTGGGCTCCTTTGCTCTTCAGTCGTTGCTCCTCAGACTCACCTCACATCGTTGGTATTGTTTCATTACTACTACCC ATTTGTGTTTTTTTCATTTCTTGTACTCTGTTGTGGTTTTGTGACTGTTTATGTTATTTGGTTCAATGAAATGGCAAATG GGGTGTCAAGCATTTGAATTTTAAAGGGTCATTTCTGTTTTCCAGTGGTAGTTTGTTTCATGGGTCTGTGCTTACATTTT CTGGGTTTTTTAGAAAGCCCTTTTTTTCTGCTTTGAAATGAGAGTTCTTTTCCCTTTTAGTTTGGTTATTGATATTGAAT ATGACTAAGCCCGTTCGGATGCGGACCAATTGCAGCTTATCCAGTGCATTTTTTAGTAGAGAAACTCCAATAAGTGCTCT TTGTTCCATTTCCAAACGAGCTTTAAGTAAGAAGCCAATGCCTCTCTTTTGTTAGCCAAGTCCAATTCTAGGCCTAAATG TGCTTTGAACTTAATATGGGAGCAAAAGGGGTTCCGAGCATTGCGAAAAGGTCATTTTGCCATTTCAAGGGTGTGTTCTT AGGATTTTCTGTTATTTTGAAACACTAGAGAAAGAAACTAGTTTTTGTTAGACATAATAATCACACTTTGAGTAACTATG TCTACTACACACTGAGTAATTATGTCTGCACACTTTTTCTATATCTAAAATCACACATAATATTCTACAGAATTCGTAAA CTTACTTCGACATATATTTTCTACATTCCATAGTGTGAGATTTGATGGACCTGATGAATTTTGAATATCTGACTTCATGC CCACCCTCATTCTTCAAAGATTAGGGGGGGGGGGGTTACCATGAGACCCAAAAACCATAAATTCGTCAGCCACGGATCTT CATTATTAGAAGTATGAAAGAGACACAAATGGGAGCCAAAGCTAGCAGTGGATAGTTAGTTTACATTATATATTAACTGA GTATATGTATAACATCATTATGAATTTCAGCTCTTCAATGTACTCATACTGCTAATTCTGGTCAATATAGGTGGCTTGGA GTAACTGGACAATTTCGTCCCAGGAAGCTGATTACTGATATAAAAAATGAGATTACTAATGCTGATGAATTTGATCTATC CACGGTCAAGGATGTTGCAAAACATTTCATTGACAAGTCACTTTTTTCAATTGGGTTAACCTCACAATTTGCTTTTTCTT CTTCAACATCCATGCTGTTTAATATAGAGGGCCATGGTGAGAAAGAAAGGCGCCGCAAAAAACTGATGCTTTTACACAAG GCATGGATTTAACTGCTTGTTATAATTTTTCATTGTCTGATGTGGAACTGTTGAAAATGTTAGACTTTATGCATACTCTC AAAGCTTGTGCATGATTTATTTGTATTTAATTTATGTATTTTTTCCCTCCTTCTCTGAAATGGATAAATATGTTGCAACT GTTAATACTGGAAATTGTCATATGTCATGTGCTAGGTAACAAATTAAAAATTAAATATCAAATCTCTGAAGAGTTACAAA AAAATTATATTTCTACTTTAACCATCCGATCACCTAAGAGGTAGTGTCATGGTCGGAAACATTTCTTTGTATTCTTGTCA TCTGCTTGTAGTCCTTCATTCTTCTAAACAACTGCCTTAATTTAGTAAAATGAGTATAATACTTTTTTTGTTGTTCATTT ACATATGTATACTCTTCTTCTTAATGGTGCTCTGTCATTGCATGTCATGTGTGCCCGTAGAAAAAAAAAAAAATTCTACT GTGGTGCTAGAGCGTATAATGAAACATCTCAATAAACAATGTTTCATGCAGCTTCCTAATCATGATCTTACCTTGGAGGC AGCGTGGCCTCAATTGTTCGTTGACCACAAAGGAAAATATTGGGATGTTCCTGAGACTTTATCGGTTGATTTGTCATCCC TTGTGTCTGATTCTGGACTGCGGTACCACTTAGGGATACATAAAAACGGTGGCAATCCCCAGGCAATTAATGCAACTGAT AGCAAGCCACCACTGTCTCTACTACCGGGGTTATGTGCGAAGGCTGCCTTTACTTATCAGAAGACCAAGTACTTATGGAG AGATGGAGAGGTTGTGGAGGATCTGGAAGAGGAGACAAGAAGGGTGGCTCCTTATGATGTACGTCTTCAGGAACCTCATG CAGCAGTGTCTGGAATAATCGGTAATTTCTCTACATTGATGCTGTCATTATCACAGATGAGAATACATATGTTCATATTA TTGTCAAAAAATGAATTCATTTTTGTAGGAAGGGCCTACAGGCTACTTGTTTCTGTAAAACTTCTTTAGTGCTCACAGCA TTTTTTTTGTCCCCCCCCCTAGTGTTTTATCTTCTTTTTTTCATTTTGTTGAACTTATAGGACATAGGTAGAGAAAAGAG AGGCGAGGCATGCCCACAATATAATAACATTATATAGTCATGCAGTTCTATCCTATTTATACTAGTAGTAGACTCCTAAT TCATCAAATAGTAAGCTAAGTAGGAAATAAAGTGAAATATGATAATCACTCCTAAGAGTTCTTGTATGGTACTTTAAATT ATTCTAACAAACATTCATGATGATATGAAATATTTTCTAGACATTTGAAGACATTTATTGTGTTGAGTATTTTCAACCAT GTCTTGTTGAAAGAGATTTTGGGTAAAAAATTGTAATTTTACCCCAAAAGTTAAGCAAAATCCAAATATGCTAATAGTGG GGTCTTATGACTCTTGAATTCTTGGTTTGCTTAAGTCACAAAAATCCTGCTCCAATAGGTTGTTTTCACCTAGGAGTCAA GACATGCATTCAAGGAATTCCTTTCACTGCGTTTAATAAATTTCCCTTGAGTTCGTTCTTAAATTTTTTCCATCATTAGC CTATTGATAGCTGTTAGCTTGGTAGACGAGTTTATGGCAATTATATTATACTTACAAAGGTTGATACTGGTTCATAATGA ATTTTAGGTAGCTCCTTTGCTTCCTGGATTCGGAATGGTTCAGCAGAAGATTCGGAGGTGTCAACAAAAAGCGGGAGATC TCGACATAATGCTGATTTGTTTGGTTCAGTCTGCTATACTTTTCAGCATGGGAAATTCACAAAGGATTTTGGGGACTTGA CCAGATTGGATGCTCGTCTTGATATATCTTCAGTTTCAGCACTTGGAAAGAAGATTATGAATGGTTTCAAGAGTTCCACC GCTGCTGATGTCAATGAACAACCATCAGCCTCACCCAGGCTTAATTTGATCTTTCAACAGCAGGTACATTTTTGCCTTGA TAGAAAAACTATTACCTGGTGTTTAATAGTTTGAATGATTCATAAATCTTAATCAATAACAAAGTTTTATGTGCAAAAGA GTATTAGAAAACTAACCCTCTGTACAAGCATATAATGGAGCTTATCCAATAAACAAATTTGAAGTACAGATTATAAAGAT AAAACCACAATGTAATGTTGATTAATTCATGGAAGATAGAGAAAAAAACTGGAATTGTCAGCCTGCCAAAAATTTGTGTG ACAATTTTCTTATGAGAAGCTGTAAAATTATGCATACATTGTGTTCTGCACAGCATATCATTGCTTATCCCCCTATATTT ATGATTCAGAATGGGAAAAAAAAAAGAAGGCTTGTTTTTTAATTAAAGGATATTGTTCATCAGTTCGGAAAGTAATCCAC AACTTTTGTACAAATGTTCAGCTCTAAAGAATGTTTTCACTTTTTCTCTCATCCACCTTGAATCTGTTTTTCCACTTTTC TCTTCTCACACATTCATGTAAATCATCTCAATACTAAATGGCACAACTCATCTGTCAATTGTGTACCTGTAGGTTGCAGG GCCAGTTGTCTTTAGAGCAGATTCACGAATTTCACTTGAGTCTTTCACCAGGAAACACGGTATCAACTTTGAAGATTTCA TTTGCAGCTTGAATTACTCCTTTAAGTTTCTGGAGTCTGGAAAGTTGGTTGCATGGTATTCTCCAAAACGGAAAGAGGGG ATGGTTGAGTTGCGCTTTTATGAGTTTTAACTGAATGCTATCCTCACCTTTTTGTAACACTTTGATTGACATTTTAATGG AAGAAGCCCAGCCTGCTTGCTTTAGAAGCTCCATTTGTTTGTCATTTACTCTCATGCGTATATGTTGCATGCACAAGAAG CAATGCAATAACATGTTGTAAAACTAATGACAAGACCTTAATCAATGCTGGATAGGGGTCCACAGTCAGGATTTGAGATC TGTGTTGAAGTTTTCATTTAACCCCATCCAAACCTAATCACATAGTCTTGTTCTTTGTAGTTAACAATAGCTCTAGATGC TACACAAGAATACTTAACAAGGAAAATACACCTAGGAGAAGGCCTGTACTGTTCAAATTCCTCCCATAATTTCTTCAATT CAGTCAAGTGTTCAATAACATGTTGCATACCATGTCTATACGTGGAAATCTGGTAATGTAGCTAAATAATCCTGGCCAAA TCACCTTGGCTAAAGCAGTCCTTAAAATCTTTCCAAGCATCTGCAGCATTTTCTGTGTACATGATGCGTTTTGAAACTGT AGGAGAGACTGAGTTGATCAAACCAAGAATGCACCATGTTATTGCATTGCTTCCAAGAACTGAAAATTGGATCAAATTTG TTCTCGGAGATCATAATCTTGCGCAATGATATAGGCCAAGATGGTAGATTTTGCACGAAAGGATAGATTCGCCATAACCC AAGAATCATTTTCTCCAGGATGAATATGATGTGGACTTCCAAGATTTTGTGTTGGGTCTTGATTCTGCAAACCTCCATTT CAATTTTGTATTGATTCTGCAAACCTCCATTTTAATTTTGTATAGGACATCCATCGTTGTTTCTCACCGTCATAGAAGCT TGATAACAGAGCCCATATTGTAGCACTGGTACCATCATAGTAGAAGGCAGCAACAGGTAAAAAAGAAGGAGAATCAGAGA ATTTGATAAGTGTGAAATTGAATCTTCAT
CDS sequence (LotjaGi3g1v0072100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTATAATACTTTTTTTGTTGTTCATTTACATATGTATACTCTTCTTCTTAATGGTGCTCTGTCATTGCATGTCATG TGTGCCCGTAGAAAAAAAAAAAAATTCTACTGTGGTGCTAGAGCGTATAATGAAACATCTCAATAAACAATGTTTCATGC AGCTTCCTAATCATGATCTTACCTTGGAGGCAGCGTGGCCTCAATTGTTCGTTGACCACAAAGGAAAATATTGGGATGTT CCTGAGACTTTATCGGTTGATTTGTCATCCCTTGTGTCTGATTCTGGACTGCGGTACCACTTAGGGATACATAAAAACGG TGGCAATCCCCAGGCAATTAATGCAACTGATAGCAAGCCACCACTGTCTCTACTACCGGGGTTATGTGCGAAGGCTGCCT TTACTTATCAGAAGACCAAGTACTTATGGAGAGATGGAGAGGTTGTGGAGGATCTGGAAGAGGAGACAAGAAGGGTGGCT CCTTATGATGTACGTCTTCAGGAACCTCATGCAGCAGTGTCTGGAATAATCGGTAGCTCCTTTGCTTCCTGGATTCGGAA TGGTTCAGCAGAAGATTCGGAGGTGTCAACAAAAAGCGGGAGATCTCGACATAATGCTGATTTGTTTGGTTCAGTCTGCT ATACTTTTCAGCATGGGAAATTCACAAAGGATTTTGGGGACTTGACCAGATTGGATGCTCGTCTTGATATATCTTCAGTT TCAGCACTTGGAAAGAAGATTATGAATGGTTTCAAGAGTTCCACCGCTGCTGATGTCAATGAACAACCATCAGCCTCACC CAGGCTTAATTTGATCTTTCAACAGCAGGTTGCAGGGCCAGTTGTCTTTAGAGCAGATTCACGAATTTCACTTGAGTCTT TCACCAGGAAACACGGTATCAACTTTGAAGATTTCATTTGCAGCTTGAATTACTCCTTTAAGTTTCTGGAGTCTGGAAAG TTGGTTGCATGGTATTCTCCAAAACGGAAAGAGGGGATGGTTGAGTTGCGCTTTTATGAGTTTTAA
Protein sequence (LotjaGi3g1v0072100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIILFLLFIYICILFFLMVLCHCMSCVPVEKKKNSTVVLERIMKHLNKQCFMQLPNHDLTLEAAWPQLFVDHKGKYWDV PETLSVDLSSLVSDSGLRYHLGIHKNGGNPQAINATDSKPPLSLLPGLCAKAAFTYQKTKYLWRDGEVVEDLEEETRRVA PYDVRLQEPHAAVSGIIGSSFASWIRNGSAEDSEVSTKSGRSRHNADLFGSVCYTFQHGKFTKDFGDLTRLDARLDISSV SALGKKIMNGFKSSTAADVNEQPSASPRLNLIFQQQVAGPVVFRADSRISLESFTRKHGINFEDFICSLNYSFKFLESGK LVAWYSPKRKEGMVELRFYEF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 3 | 18 | 16 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 341 | 319 | - | – | |
| PANTHER | 48 | 341 | 294 | 6.1E-144 | – | |
| PANTHER | 48 | 341 | 294 | 6.1E-144 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0072100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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