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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0077600 |
| Transcript ID | LotjaGi3g1v0077600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase; TAIR: AT5G54400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q74LY0|MENG_LACJO Demethylmenaquinone methyltransferase; TrEMBL-Plants: tr|A0A072VKY5|A0A072VKY5_MEDTR S-adenosylmethionine-dependent methyltransferase, putative; Found in the gene: LotjaGi3g1v0077600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8568639..8570961) extracted from Lotus japonicus Gifu genome v1.2.
CAGTGCTCATTCATTCATTCACTCACTCACTCATGCTTTCGTTTCGCTCCTCTGTCCTCACTCGCCTCTTAAACGCAGTT TAACGTCGCCGTTTCATCCCTTTTCTCTGTCACACTAGTGCCAAAACGACGAATCAAAACGCGTTACAGCACCAGAATCC AAACCTTAAAAAAACACTCACAACACAACTGCGCCGCCATAGAAAAAAAAAAACCTGGATCTAGTTCTGGGTATTGTTCT TCCAATTTCTCAAACACTCTTTGTTATATGCCTTATGATAATGATATTACAGTAAATTGATTTGATTTGTTGCGAGTTCG CGACGATTCAGTTACTAACTGAATCAATCAAATGGGGAAATCATCAACAAGTAGTAACAGCAGAGATTGGAATCAGGTGT ACGCGATCTACGGAATGGAGCAGTGGCACACGCTGATTTTTCTCTTATGTCAAGCGATCTTGTTCTCAGTGGTTTCAGTT ATGTACTTGATTTACTTCAACACAATCTGCGTTTTCTTCCAGAAGATTCTCTCCGGCGCGGCGGCGGCGAGGTTCGCCGC CGGGTTTACCGGCTCGGTTGTGGCGCTGTCAGCTCTGTGTCTGTTTTTCGCGGCGGCGAACTTCTTCTACTCCGCTGTGC CGCTTCATTATGACATGGCGCAGAGGATCGTCTCCGCCGTGCACGACTGGTCCTCTGTGAAGCTAGCTCTCGATCTCGGC TGCTGCGGCCGTGGTGTTCTTCTCAACGCGGTGGCGACGCAGCTGAAGAAGGAAGGGAGTTCGGGGCGAGTTGTGGGGCT GGACCGGTCAAAACGGACGACGATGTCGACGCTCCGGGCGGCGAAGATGGAGGGAGTTGGGGAGTACGTGACGTGCCGTG AAGGCGACGCGCGGCGGCTGCCGTTCCCGGATAATTACTTCGATGTTGTGGTTTCCGGCGTGTTTGTGCATACTGTAGGG AGGGAGTATGGGCAGAGGACGGCGGAGGCTGCGGCGGAGAGGATGAGGGCGGTGGCGGAGCTGGTGAGGGTTTTGAAGCC TGGTGGCGTTGGTGTGGTGTGGGATCTGGTGCATGTGCCGGAGTACATGGCGAGGCTGCAGGAGCTGAAGATGGAGGATG TCAGAGTCTCAGAGCGTGTAACAGCTTTCATGGTGAGTAGCCACATCGTATCATTCAGGAAGCCCAGTCAGCACGTGCAT GGACCCGCTGAGGTTCGTTTGGATTGGAGATTAGGCTAACTTGGAAAAAAATGGAAAATTTTCCTTAGTTTCTAATAACC CATAGAGAAATATCCAAATATATATATTATTATATATTATATATATAGTATAGTATATAGTATAGTATACCCATTTATAA ATATTTTGTCTAGGGTGTGTCTTTTTTTGTTTCTCAATGTGAATGTGTTTCTGAAAGTGAAGAAATTCCTGGGGAGGCGA AGTCAAACCAGATGTTGAGATTGATAGAATTGGAGCTTCTGATTTATGTGTATATTATATTATTTTCATGATTTTGTAGA TAGCAATGAAGTAGTACCACTAATGTGTAATGGTGATTGTGTAACACTAATTATAATTTGCATTGTGTTATGTTTTAGTA TGTTTTTCAGTTTTTCTGATTTTGCATGCTATGGATGCAAAAAAATTCTACTGAATGCAACCAACAATGTCTAGAATAAC TGATAGATACTTGAGTTTTTTAATAATTTAGTTGAGAATTTGTATCCTAAATTCAGTTTATAGAAAAAGATTTGATGCGA GATGCGTGTCACTTAATGTGGTCTTAGACTTCGAGAAGAATAATATTACAGGGTTGGTTATGGCATGCCTTAATGTAAAA TAAATTTTAACTGAATTGGAAAGGGGGGAAGATTTGTGATGGGCAGAAAAGCCGCTGATTGTGGTTGAATTGGAATTTGG AAGAGAACAATAGGGATGGAGACTAGTAGTTTTTGAATTTTGAGCTTGAAGGGGTCACTGTCTTATTTAATACTGGGGGG TCGTGTGTGTTACCTCCATGTGAGAGTGGATTTTATTTAAAAATGTTGAAAGGCGATGGTGATGAATGGGTGGGAAAAAG TAGCTTAGTGATATTTCTTTCCAGTACAATTCAACTTTGTGGACCTTGAGGGTTGAAATGATGGTGTGGACCGGTAGTGG GAACAGGTTGCTGTTTGAAGTATGGAGAGTCGCAATCGGAGATTTTCGATGGTGAAGCATTAATAGTGACATGCTGGAGT TAAGGCATATTTAGATATACAGTATAAAATTACGGTGAATTCGACTTTTGATGGATAAAAACTGCCTATAAAAGAAAAAC CGG
CDS sequence (LotjaGi3g1v0077600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAATCATCAACAAGTAGTAACAGCAGAGATTGGAATCAGGTGTACGCGATCTACGGAATGGAGCAGTGGCACAC GCTGATTTTTCTCTTATGTCAAGCGATCTTGTTCTCAGTGGTTTCAGTTATGTACTTGATTTACTTCAACACAATCTGCG TTTTCTTCCAGAAGATTCTCTCCGGCGCGGCGGCGGCGAGGTTCGCCGCCGGGTTTACCGGCTCGGTTGTGGCGCTGTCA GCTCTGTGTCTGTTTTTCGCGGCGGCGAACTTCTTCTACTCCGCTGTGCCGCTTCATTATGACATGGCGCAGAGGATCGT CTCCGCCGTGCACGACTGGTCCTCTGTGAAGCTAGCTCTCGATCTCGGCTGCTGCGGCCGTGGTGTTCTTCTCAACGCGG TGGCGACGCAGCTGAAGAAGGAAGGGAGTTCGGGGCGAGTTGTGGGGCTGGACCGGTCAAAACGGACGACGATGTCGACG CTCCGGGCGGCGAAGATGGAGGGAGTTGGGGAGTACGTGACGTGCCGTGAAGGCGACGCGCGGCGGCTGCCGTTCCCGGA TAATTACTTCGATGTTGTGGTTTCCGGCGTGTTTGTGCATACTGTAGGGAGGGAGTATGGGCAGAGGACGGCGGAGGCTG CGGCGGAGAGGATGAGGGCGGTGGCGGAGCTGGTGAGGGTTTTGAAGCCTGGTGGCGTTGGTGTGGTGTGGGATCTGGTG CATGTGCCGGAGTACATGGCGAGGCTGCAGGAGCTGAAGATGGAGGATGTCAGAGTCTCAGAGCGTGTAACAGCTTTCAT GGTGAGTAGCCACATCGTATCATTCAGGAAGCCCAGTCAGCACGTGCATGGACCCGCTGAGGTTCGTTTGGATTGGAGAT TAGGCTAA
Protein sequence (LotjaGi3g1v0077600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKSSTSSNSRDWNQVYAIYGMEQWHTLIFLLCQAILFSVVSVMYLIYFNTICVFFQKILSGAAAARFAAGFTGSVVALS ALCLFFAAANFFYSAVPLHYDMAQRIVSAVHDWSSVKLALDLGCCGRGVLLNAVATQLKKEGSSGRVVGLDRSKRTTMST LRAAKMEGVGEYVTCREGDARRLPFPDNYFDVVVSGVFVHTVGREYGQRTAEAAAERMRAVAELVRVLKPGGVGVVWDLV HVPEYMARLQELKMEDVRVSERVTAFMVSSHIVSFRKPSQHVHGPAEVRLDWRLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 1 | 293 | 293 | 5.3E-154 | – | |
| PANTHER | 1 | 293 | 293 | 5.3E-154 | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 28 | 56 | 29 | - | – | |
| Phobius | 57 | 67 | 11 | - | – | |
| Phobius | 68 | 93 | 26 | - | – | |
| TMHMM | 70 | 92 | 23 | - | – | |
| Gene3D | 80 | 277 | 198 | 2.9E-23 | – | |
| Phobius | 94 | 295 | 202 | - | – | |
| SUPERFAMILY | 95 | 260 | 166 | 1.08E-21 | ||
| Pfam | 120 | 234 | 115 | 5.2E-22 | ||
| CDD | 120 | 240 | 121 | 1.21163E-9 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi3g1v0077600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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