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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0080700 |
| Transcript ID | LotjaGi3g1v0080700.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)H dehydrogenase (Quinone); TAIR: AT5G54500.1 flavodoxin-like quinone reductase 1; Swiss-Prot: sp|Q9LSQ5|FQR1_ARATH NAD(P)H dehydrogenase (quinone) FQR1; TrEMBL-Plants: tr|I3T2W0|I3T2W0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0080700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8941509..8942881) extracted from Lotus japonicus Gifu genome v1.2.
ATCATTACAAAAAAGGAAAATTCATATGGACTCTTGTTTCTATATAACTCTACTAATAAATTATAGTCTTATGTTTTCTG CTACTTGCCTTTTGTTTTTGTTAATCTGCATTTCCTCTATCTTTTCTCATTGTCCTTTAGATTTTTTCTCAATTATCCTT TCATTTTGTTGATTTCTTTGACAGGTACTACTCCATGTATGGGCATGTGGAAAAACTAGCAGAAGAAATAAGGAAAGGGG CTGCTTCTATAAAAGATGTTGAGGCGAAACTATGGCAGGCATGTATTAATGTTTCAAAATTTTCATTTCTCTATGCATTC TAAGGCTTAATTCCCCATAGAGCATAGTGAATACTGAATACTTGGTTTTCAGTTCATTTTAGCTGTAACATTCTGTTGGT TAAGATCCTTCATTGTGACTGTATTCTGTTGCCCATGAACTTTCAGAAACTTCTACTACTTCATGTCATTTTTATGGCCT CAATGTTCTATCAAATCTACCCATATAGGTGCTATCTAACAGCAGGATATCTTGCATGTGGTTTACAAAAAAATGTTGTG TGATTAATTTCGGTATATTGTGTAATTTTGGAGTAAGATTTTACTTCCCATATTAACTCTTGCTAAATTTGAGATGTGAT AAGAACAACTACATTATTTAGAGCACAGAGCTTCCTTGCTTATCTTATTGAACCGTGAACAGGTACCTGAGACACTGTCA GATGAGGTGCTTGGTAAGATGATGGCACCACCCAAGACTGATGTGCCGATCATTACCCCCAATGAACTCCCTGAGGCTGA TGGCTTTGTTTTTGGCTTCCCGACAAGATTTGGAATGATGGCTGCTCAGTTTAAAGCTTTTTTTGATTCGACCGGAGGTT TATGGAAAAAACAAGAGCTTGCAGGCAAGCCTGCTGGAATCTTCTACAGCACTGGTTCTCAAGGAGGTGGACAAGAGACT ACAGCGTAAGAACCTTTATCTGAGACTCCTGAGTGTTTGGTTTCTTACTTGAATACCAAGGTGAATCAAAACATTAATGC TATGAAACTTTTGGAATCCATCACAATCATTATCTTAGTGTTGGGTTTCTTACTCCAGTACCAAATGTTAATGCCATTGC AACTTTTGGAATCCATCACAGGCTTACTGCTATCACTCAGCTGGTTCATCATGGAATGCTATTTGCTCCAATCGGTTACA CATTCAATCGCATGTTCGAGATGGAGGAAGTGAAAGGTGGAAGTCCATATGGTGCTGGAACTTATGCTGGTGATGGCTCC AGACAGCCAACTGAGCTTGAGTTGAAGCAAGCATTCCACCAAGGGAAGTACATTGCCTTCATCACAAAGAAGCTCAAGCA AGCTCCTGCATGA
CDS sequence (LotjaGi3g1v0080700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATGGGCATGTGGAAAAACTAGCAGAAGAAATAAGGAAAGGGGCTGCTTCTATAAAAGATGTTGAGGCGAAACTATG GCAGGTACCTGAGACACTGTCAGATGAGGTGCTTGGTAAGATGATGGCACCACCCAAGACTGATGTGCCGATCATTACCC CCAATGAACTCCCTGAGGCTGATGGCTTTGTTTTTGGCTTCCCGACAAGATTTGGAATGATGGCTGCTCAGTTTAAAGCT TTTTTTGATTCGACCGGAGGTTTATGGAAAAAACAAGAGCTTGCAGGCAAGCCTGCTGGAATCTTCTACAGCACTGGTTC TCAAGGAGGTGGACAAGAGACTACAGCGCTTACTGCTATCACTCAGCTGGTTCATCATGGAATGCTATTTGCTCCAATCG GTTACACATTCAATCGCATGTTCGAGATGGAGGAAGTGAAAGGTGGAAGTCCATATGGTGCTGGAACTTATGCTGGTGAT GGCTCCAGACAGCCAACTGAGCTTGAGTTGAAGCAAGCATTCCACCAAGGGAAGTACATTGCCTTCATCACAAAGAAGCT CAAGCAAGCTCCTGCATGA
Protein sequence (LotjaGi3g1v0080700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYGHVEKLAEEIRKGAASIKDVEAKLWQVPETLSDEVLGKMMAPPKTDVPIITPNELPEADGFVFGFPTRFGMMAAQFKA FFDSTGGLWKKQELAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMLFAPIGYTFNRMFEMEEVKGGSPYGAGTYAGD GSRQPTELELKQAFHQGKYIAFITKKLKQAPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 189 | 189 | 5.7E-113 | – | |
| PANTHER | 1 | 189 | 189 | 5.7E-113 | – | |
| ProSiteProfiles | 1 | 180 | 180 | 17.789 | ||
| TIGRFAM | 1 | 187 | 187 | 5.0E-63 | ||
| Gene3D | 1 | 189 | 189 | 6.3E-72 | ||
| SUPERFAMILY | 1 | 188 | 188 | 1.04E-52 | ||
| Coils | 5 | 25 | 21 | - | – | |
| Pfam | 56 | 129 | 74 | 1.9E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD(P)H dehydrogenase (quinone) activity | Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi3g1v0080700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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