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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0085400 |
| Transcript ID | LotjaGi3g1v0085400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450; TAIR: AT2G32440.1 ent-kaurenoic acid hydroxylase 2; Swiss-Prot: sp|B5BSX1|BAMO_GLYUR Beta-amyrin 11-oxidase; TrEMBL-Plants: tr|A0A0H3Y0Q9|A0A0H3Y0Q9_GLYGL Cytochrome P450 88D6; Found in the gene: LotjaGi3g1v0085400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9623190..9624830) extracted from Lotus japonicus Gifu genome v1.2.
GTTAGAATATAATATAAAACCATCGGTGTGGCTCTTACCCAACAACTTAAGTTTTTGGGATAAGTGGTTGTTTGACATAA AAAGCTCAATCCAACCCAACCTATTTTATTTCCTTTAACCAATTATGAAAAATCAACTTGTTATAAATAGAGGGAAGGAT TGAAGCATTGATCATAGACATCAGAAATGGAACTACACTGGGCTTGGGTGTCTACTGCCACTTTGGCTACATGCTACGTT TTTGTAGCCATATTCTTGAGGAGGCTGAATGGGTGGTACTATGATTATGATGTGAAGCTAACAAAGAAACAACTCCCTCT TCCTCCTGGTGACATGGGATGGCCTCTTATTGGCAATCTAATTTCCTTCATCAAAGATTTCTCATCCGGCCACCCTGATT CATTCATCAACAATCTTCATCTCAAGTAAAGTCTCTCTAATTATTTTCTCTTCTTAGTTAGTACCATTCTTATCATGGGC GCATCTAAGAGGGACAGGCAGCAGGGTCACTTAGTTCGACCTTCTAAAAATTTTATCAATTTTTTGTTATTTTATTTCAA CCACCTAACGAAAAAATCATAGATATGGTATTATTTCTGATTCTTATTATGTTTGTTCAGATATGGACGAACCGGTATCT ACAAGAATCACTTGTTTGGGAATCCAAGCATAATCATATGTGAGCCTGAGATGTGTAGGAAAGTGTTGACAGATGATGAA AACTTCAAGCTAGGTTATCCAAAATCAATCAAAGAGTTGGCACGATGTAGGCCCATGACCGATGTGTCTCGTGCAGAACA CAGGCATTTTCGGCGGCTAATAACCGCTCCCATTATTGGTCACAAGGCGCTAGCAATGTACCTAGAACGCATTGAGGACA TTGTTACAAATTCGTTAGAAGAATTGTCTAGCATGAAGCACCCGGTTGAGTTGTTGAAGGAGATGAAGAAGGTGTCATTT AAAGCCATTGTTCACATTTTCATGGGCTCTTCTAATAACCAGCACGTCATTGAAAATATAGGCACTTCATTTACTGATTT ATATAATGGCATGTTCTCTATCCCCTTCGAAGTACCCGGTTTCGCTTTCCACAAAGCACTCAAGGTTCTTAATTTCCTTT TATTATTTTGATATATGCATTATTTCTATAAAAAAAATACTAGTGTATCACAATTATTTTACAGACATCTGAAATTTGTG GTAGTTTATGCAAAACTTACTTTAAATTATGACAGTCAAAACCACCACAAATTACAAGTGTTTACGTACGAAACAAAAAA TGGTGGTTCATAAAAAGAATAGCATATTTTTATTTTTCATCTTATGCATGGGAGCATATTATTAGGCTCGTGCAAAGCTG GCAAAGATAGTTCAACCTGTTGTGGATGAAAGGAGGTTGATGGCCAGAAATGGTGCAGAGGGAAACAATAAAGATCTCAT TGATATTCTTTTGGAAGTCAATGATGAGGAGAATGGTCAGAAATTGAAGGATGAGGATATTATTGACATACTCATAGGAT TTTTATTTGCTGGTCATGAAAGTTCTGCCACTGCTCTCATGTGGTCAATTGTGTATCTTACGCAACATCCCGACATCTTG AAAAAAGCCAAGGTAAAATTACATTTAAGCACAAGTAGAAG
CDS sequence (LotjaGi3g1v0085400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACTACACTGGGCTTGGGTGTCTACTGCCACTTTGGCTACATGCTACGTTTTTGTAGCCATATTCTTGAGGAGGCT GAATGGGTGGTACTATGATTATGATGTGAAGCTAACAAAGAAACAACTCCCTCTTCCTCCTGGTGACATGGGATGGCCTC TTATTGGCAATCTAATTTCCTTCATCAAAGATTTCTCATCCGGCCACCCTGATTCATTCATCAACAATCTTCATCTCAAA TATGGACGAACCGGTATCTACAAGAATCACTTGTTTGGGAATCCAAGCATAATCATATGTGAGCCTGAGATGTGTAGGAA AGTGTTGACAGATGATGAAAACTTCAAGCTAGGTTATCCAAAATCAATCAAAGAGTTGGCACGATGTAGGCCCATGACCG ATGTGTCTCGTGCAGAACACAGGCATTTTCGGCGGCTAATAACCGCTCCCATTATTGGTCACAAGGCGCTAGCAATGTAC CTAGAACGCATTGAGGACATTGTTACAAATTCGTTAGAAGAATTGTCTAGCATGAAGCACCCGGTTGAGTTGTTGAAGGA GATGAAGAAGGTGTCATTTAAAGCCATTGTTCACATTTTCATGGGCTCTTCTAATAACCAGCACGTCATTGAAAATATAG GCACTTCATTTACTGATTTATATAATGGCATGTTCTCTATCCCCTTCGAAGTACCCGGTTTCGCTTTCCACAAAGCACTC AAGGTTCTTAATTTCCTTTTATTATTTTGA
Protein sequence (LotjaGi3g1v0085400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELHWAWVSTATLATCYVFVAIFLRRLNGWYYDYDVKLTKKQLPLPPGDMGWPLIGNLISFIKDFSSGHPDSFINNLHLK YGRTGIYKNHLFGNPSIIICEPEMCRKVLTDDENFKLGYPKSIKELARCRPMTDVSRAEHRHFRRLITAPIIGHKALAMY LERIEDIVTNSLEELSSMKHPVELLKEMKKVSFKAIVHIFMGSSNNQHVIENIGTSFTDLYNGMFSIPFEVPGFAFHKAL KVLNFLLLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 5 | 24 | 20 | - | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| PANTHER | 7 | 245 | 239 | 2.9E-96 | – | |
| PANTHER | 7 | 245 | 239 | 2.9E-96 | – | |
| Phobius | 25 | 249 | 225 | - | – | |
| Gene3D | 35 | 248 | 214 | 1.0E-32 | ||
| SUPERFAMILY | 39 | 240 | 202 | 2.36E-24 | ||
| Pfam | 46 | 221 | 176 | 1.3E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0085400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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