Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0088500 |
| Transcript ID | LotjaGi3g1v0088500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP synthase subunit alpha; TAIR: AT3G07310.1 phosphoserine aminotransferase, putative (DUF760); Swiss-Prot: sp|Q9LVJ0|UVB31_ARATH UV-B-induced protein At3g17800, chloroplastic; TrEMBL-Plants: tr|I1JM64|I1JM64_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0088500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9976877..9980995) extracted from Lotus japonicus Gifu genome v1.2.
CTCCACTTTGTTTTTATGTGCTATTTTACTATTTTTTATTATAAACAACCGGTACCCAATCATTCTTTAGATACGGCTAA ATTTAAGATTTAGTCACAGTTAAGACTCTTCATTCCCAGACAAAGTATATTGTATAGAGGTTGAACCGAAATATTTTCCC ACACACTCACCCTAACTGAGCTATCTTTATCCTTATTGAATTGTTTCTCCGTAATTCAACACAGCACAACACAAACATAA AACGAATCAAAAAACCATTTCTTCTCTCACAATCACAACACAACAACCTATCATCTCTCTCTCACTCTCTCACTCATTCA CCTTGTTGCTTCCGAAAACTCACTCTGCTGTTGATGGAACCTTGTCTCCTCCACCACCACCACCACACAACCCTCACATA CCCTTCTCCACTCTCATCACCACCACCACCACCACCCTCCTTCAAAGGATTCTTGTTTACAAGGCCTATATCTGTTGTTT CTTCTTCTTCTTTGCACCTTACTTGCAGACCAATCAGAAGGGCTAAGATCAAAGCAAGTGCTGGTGTATGCAGCCTCAAT TCCCCTCTGGAGCCACGTTCTCTGGTGGGGAAGTTCCTCAGTGGGGTTCTGCAGAACCATCGCCAGCTCTTCCATGTTGC TGTTGGGGAAGAGCTGAAGCTCTTGGCTGATGATCGAGATGCTGCACATGCTCGCTTGATTCTGGCTTCTGATTCTGATG AGTCCTTGCTTCACAGGTTTGTGGCCAAATCGTGATGCCCCTTTTTGTTGCTTATTGATCATATATATGAGCTTTGCTTC TCTTAATCAGGGTTCTTGCTGTTATATGTGGATGTGTGTCAAAAAAATTACATATTTTTATTGATCATATTTTTGTTGGT AGAGGTGTGTGTGTGTGAAGCAAGTAATATTTTCCTGATTTAATTGGTCAACATTAATGTTTTTGTTTTTTTTTCTTATG TTGAAGCTTTGTATATTTGTTGACTTCATTTTAGTTAGAGGGAGAAGAAGGTTGAACTCAAGTTTCTAAACTGGTAGAGG CTTGATTTTTTACTTTTAATTTGTATGGTAATAGTGAATGTAAGTATGGAGAATGAACCATATTGTGATCCTAACAGGCT TGATTTGTATGAAGTTATCGTTTTCCTTGTTTTGTCTTTAATAGAAAAAGAAACTTTGAGTGTAAAGAGAGAATCTATAA CTGAAGGGAAGGTAAGTATCTTATACTACAGATAGAGAAGGATACAACAGTGAGCAAAGTTAGAAGTCAAGAAGAAAGCA TATTTGAGATGGCAACTCCACTGAAACATTCATGAGCAGGATACCAAGGAAAAGTCTAAATTACTAACGTATCCCGTAGA AAATTTTGGGGGGCAAAGCGAGACCCTTGAGTTGAGGATGCAAGCATTTCACTCTCAAGTCCAAATTTTCAATCATATAG GCCAGAGCACAAAACCTTGGCTTCCATGTTCTCATCAAAACCTGAATTACTAAACATTTGAACCTGTCCCAAGTAGAACG ACACATCTAATACTATGGAGATCCCTTAAAAAAATCTATAAGAACGTTAATTGTTTAAAAATAAGTTCCAACGCGTGCTG GAAATTGCAGTACGTAGCACTTATCAGGAATGTGACTGAGGCCTGTGACTTGTCACAAGTCATTTATATCAGAACTAATA AGATTTGATCAACGGAATGTCTCTGATTTGGATCAGGGTTTTATGTTTCTTAGGAAATTCCTGATAGAATGCCCTGATTT TGTTGACTCTGCCCCTTAAATAAATATTAGTCATGACGAGTGATGAACATCTTTTGGGTTGCTATGTTCTCTAGATGGAG TTCAGTGAATGGCCTATTTCATTTCCTTTTTCTTACAAGAAAATTCTGTAGATTCTAGGAAGGTTAATACTAAAACCTTC CTATACTATTAAAATGCTTTGTAAATGTTCTTACCATTTCAAAGATATGTATGATAATTGTTAAAAATATAATATTAAAC CATTCGTATGTCTTCACCTAACAACCTAAACTTTTGCGGTAGTTGACTTATGATATGGTATTAGAGCCTTTGATCAAGTG ATATAGAGTTAAAATCCTTGCCAATTTCATTATCATAAGAAAAAAAATTGAATTCAATTCAGCACAAGGGGGTGGGTTTG TACAATGTCCACACTTCAACCCGAAGGACTCTTGTGTGAAAGGGTCCGAGAAAAAGAAAACCATTCATGGTGAACTAGGA GGGTGTTAAGTCTTCAAACAGAATGTATAAGCCTTTATTAGATTTGAGATGATTTAATTTTCACCGCCTCAAAATATAGG CTCTCTGCCCACTTTGATCTGAGCTTTCATATAATTTATTTTATGTTGTTTTGATTGGAGTCAAATATTTATGGACTTGT TGGATCTTAAATGGTTTCTGCATGATTAAATGACCAGGGGTATTGCCTGGCATTGACATCTTATGGTTGAGTGATATGAG CAGAACAGTTAAACCAAGATCTTAAATTCCTTGGTAAGTTGCGTAGTACAATTGTAGATATATTCGTTGAACAAATGTTG ACTTGAAACTTTTTCTGAATGCTAGGAGGATTGCACAACTAAAAGAGAATCAATGTCAAGTTGCTGTAGAAGATATTATG TCTTTGCTGATATTTTACAAATTTTCTGAGATCAGAGTCCCTTTGATTCCAAAGCTTTCTAGGTGCCTTTACAATGGCAG GCTAGAGATATTGCCTTCTAAGGACTGGGAACTTGAGTCCATTCACAACGTGGAAGTATTGGACATGATTCGGGAACACG TAACTACTGTAACTGGATTAAGAGCAAAATCTAGTGTATCAGAGAGTTGGGCAACAACCAAAGTTAGACAGTTCCTACTT GCTAGAATATATGTTGCTTCGATATTATATGGTTACTTTTTGAAGTCTGTTTCATTGAGGTACCAGCTAGAACGAAATCT ATCTCTGGATAACCATGGTCATAAGACTTCCCTCTCTTATAATGATATGTGTAATGGATTGAAAGATACCATCTTTGGCC GCTTGAGCAATATGCCATCTTCCGTAGGGAAAGGGTTGATCAGGCAAGAAGAGGAACTTGAAGACTTAAAATGTTATGTT ATGAGCTTTCATCCTGGGTCATTGCAGAGATGTGCCAGGTTGAGATCTAAGGAGGCTGTGAATTTGATTGAGAGTTATAG TTTTGCCCTTTTTAACCATGAGGGTTCTGGTTCAGTTGAGAAGGATGATGAGATTTTGACTTCATTTTCTAGCCTCAAGA GGCTAGTCTTGGAAGCTGTTGCTTTTGGATCTTTCCTGTGGGAGACAGAAGATTACATTGACATGTTATATAAGCTTAAG GATAATTAAGCTGTGTCAAGGCACTGGTTGTTGAGAGAATTCTCCTTGTGTATATAGTGAGTTTTGGTTTTAGCAGTAGA AAGTTGGATTATGTTTATATTGTATATTATTATTAGTACACGTTTTGTGTACTATATAATGTACAGTTTAATGCTTTGCT TGTCTTTACTCTTTAGAGATTTGAAATAGTGATGAGGTTGTATATGAATCTACACTCTTCATTCTTTCCTTTTTTTTATA ATTTTCCGTTTTTTATATGATGGTTATGATCGATGTCATTAGATAAAAGAATTTGTGTCTCCTTCATTGCACAGAATTGG AATTGAGATTAAAAGAATCCTCATGGGTCAACAAGGGTAGGAAGAAACTACAAAACTCTATCATGTTTCATGCATCCATG TTTCATTCATCCATGTTTCATTCCTTAGGCCTAGCTGAAGTTGACATCTTACTTTCTTTCACGGCACCAAGTATGGCCTG CATGTGATACCTTAACTGCAAAAGTTAAGCATCTTTATGTCTTGGGGGTTTGTACATGAGCCTCAAGTGATGAGTTGGTA AAGCTTGTGGATTTCACAATCCTGATATTGTTCAGGGCCACAAAAATATAAAAAAAGATGGTGCTGATCATTTGGTCATC TTTTGTACGTAACATTCTTTGAATCTTTATTGCGGCCTACATGTGAAGATGGTGGCACTAGTCAGTATTAGATAGCATCC TTATCAAATCAGTTAAGCGTTCACAAATCTATTGCCACG
CDS sequence (LotjaGi3g1v0088500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCTTGTCTCCTCCACCACCACCACCACACAACCCTCACATACCCTTCTCCACTCTCATCACCACCACCACCACC ACCCTCCTTCAAAGGATTCTTGTTTACAAGGCCTATATCTGTTGTTTCTTCTTCTTCTTTGCACCTTACTTGCAGACCAA TCAGAAGGGCTAAGATCAAAGCAAGTGCTGGTGTATGCAGCCTCAATTCCCCTCTGGAGCCACGTTCTCTGGTGGGGAAG TTCCTCAGTGGGGTTCTGCAGAACCATCGCCAGCTCTTCCATGTTGCTGTTGGGGAAGAGCTGAAGCTCTTGGCTGATGA TCGAGATGCTGCACATGCTCGCTTGATTCTGGCTTCTGATTCTGATGAGTCCTTGCTTCACAGGAGGATTGCACAACTAA AAGAGAATCAATGTCAAGTTGCTGTAGAAGATATTATGTCTTTGCTGATATTTTACAAATTTTCTGAGATCAGAGTCCCT TTGATTCCAAAGCTTTCTAGGTGCCTTTACAATGGCAGGCTAGAGATATTGCCTTCTAAGGACTGGGAACTTGAGTCCAT TCACAACGTGGAAGTATTGGACATGATTCGGGAACACGTAACTACTGTAACTGGATTAAGAGCAAAATCTAGTGTATCAG AGAGTTGGGCAACAACCAAAGTTAGACAGTTCCTACTTGCTAGAATATATGTTGCTTCGATATTATATGGTTACTTTTTG AAGTCTGTTTCATTGAGGTACCAGCTAGAACGAAATCTATCTCTGGATAACCATGGTCATAAGACTTCCCTCTCTTATAA TGATATGTGTAATGGATTGAAAGATACCATCTTTGGCCGCTTGAGCAATATGCCATCTTCCGTAGGGAAAGGGTTGATCA GGCAAGAAGAGGAACTTGAAGACTTAAAATGTTATGTTATGAGCTTTCATCCTGGGTCATTGCAGAGATGTGCCAGGTTG AGATCTAAGGAGGCTGTGAATTTGATTGAGAGTTATAGTTTTGCCCTTTTTAACCATGAGGGTTCTGGTTCAGTTGAGAA GGATGATGAGATTTTGACTTCATTTTCTAGCCTCAAGAGGCTAGTCTTGGAAGCTGTTGCTTTTGGATCTTTCCTGTGGG AGACAGAAGATTACATTGACATGTTATATAAGCTTAAGGATAATTAA
Protein sequence (LotjaGi3g1v0088500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPCLLHHHHHTTLTYPSPLSSPPPPPPSFKGFLFTRPISVVSSSSLHLTCRPIRRAKIKASAGVCSLNSPLEPRSLVGK FLSGVLQNHRQLFHVAVGEELKLLADDRDAAHARLILASDSDESLLHRRIAQLKENQCQVAVEDIMSLLIFYKFSEIRVP LIPKLSRCLYNGRLEILPSKDWELESIHNVEVLDMIREHVTTVTGLRAKSSVSESWATTKVRQFLLARIYVASILYGYFL KSVSLRYQLERNLSLDNHGHKTSLSYNDMCNGLKDTIFGRLSNMPSSVGKGLIRQEEELEDLKCYVMSFHPGSLQRCARL RSKEAVNLIESYSFALFNHEGSGSVEKDDEILTSFSSLKRLVLEAVAFGSFLWETEDYIDMLYKLKDN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 47 | 388 | 342 | 1.9E-153 | – | |
| PANTHER | 47 | 388 | 342 | 1.9E-153 | ||
| Pfam | 126 | 253 | 128 | 9.5E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0088500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…