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LotjaGi3g1v0091000.1

Overview

Field Value
Gene ID LotjaGi3g1v0091000
Transcript ID LotjaGi3g1v0091000.1
Lotus japonicus genome version Gifu v1.2
Description Cytochrome P450; TAIR: AT2G45560.1 cytochrome P450, family 76, subfamily C, polypeptide 1; Swiss-Prot: sp|H2DH18|C7A12_PANGI Cytochrome P450 CYP736A12; TrEMBL-Plants: tr|A0A0N9XF29|A0A0N9XF29_LOTJA Cytochrome P450; Found in the gene: LotjaGi3g1v0091000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:10427697..10432936) extracted from Lotus japonicus Gifu genome v1.2.

TCAAACCACAACTAACACTCCCCAAAACCTTGTCTCTATTCCTCAATCAAGCAAGTATGTTACCTCAAGCATTAGCTATA CCTGCCTTTCCCTTGCTCTTTCTGATATTACTTTTCATTCTGTCACTTGCCCTGCTTCTAAATAAAAAAGAACATAAAAA TGGTAGGAAATATCCACCAGGTCCCAAACCTCTGCCAATTATAGGCAACCTCCACCTGCTGGGTAAACTCCCACACCGCT CCATTCACGAGCTTGCCAAAAAATATGGACCCATCATGTTCTTAAAGCTAGGACAGGTCCCAACCATTGTGGTTTCGTCC CCTGAAACAGCAGAGCTAATCCTCAAGACCCATGACTCTGTTTTTGCTAGCAGGTCTTTAACTCAAGCATCCAAATACAT TTGTGGACTGGGCGGGACATAAAAGGAGATTATGCCCGCCCAAAATGAACAATAAACGATTGAAGACAGCCACGGCGGGA ATGACGACACAACGAGCTTCTTTGCCCATCCTTAGGTGGACCCGTAAGCCAGCTGGAAGATTCCTTTGGATTTGTCTTAT ATGTACAGGGATTTGGGCCCTGATTGTCAGGCCCAAATATAGGAAAGGTCCATATCATGACCACCCCCTCTATAAAAGGG GAGGTCATCCACTTGTACGAAACCAACTTTTCAGCATTAATGAGAATATTCTTTTTATGGTAGTTTAGCTATTTTAGTGC TCTGCTAGGGTTTACTTTCTGTCATTCTTTTGTGTAAGCTTGCCCTAGTACAGAACATTGGCGCCGTCTGTGGCTCTGAC TTAACTCTTCCGGTGACAGAAGGAGGAATTACGAGCCATGGAGACTCGTTCATGCGGCGTGGGTCGACGCGATCATCGCC GGCGCGGTGGTGGTCGACACGGCGGTCGCGGCGGCGGACGGAACACCAACCGTCCCGTACTGGATGAGCAAGAGCAGGAA GCTTCCTCGGAGGGGGTCCACTCAGTGGCGCCGTCGCCAGCGTCATTGGTGAATGCAGCTCTGGGAAGACCTTCAGATCT GATCGCTAAATCAGATCCAGGTGTGCGGCGGCGTTCAACGCCGCCTAACTACGTCAATTTGGAAGATCTTAAAACCACTG CTCCACGGAGAGCGCAAGAGGCAGTGACAGGTATCACGCCTGCGGCTTTGCAACAAATGTTAGATACCTTGCAGAAGGTG CAGTCCCAAAACGAGCAGTTGCAAGCCCAAGTTGAGTATCTTACTCAGCGGCAGGATTTTAAGCAAGAACAACGCCTGGA GGCGGAGGATGTAGTTGAATTTCAACCTTTTGTTCCAGCCATCACTAGGGTGGACATTCCAAAGCACCTGCAAACCATGG CATTAGACGCCTTTTCGGGCGAATCTGATCCCATGGAGCACCTTAGATATTTCAATACCAAAATGGTGATCGGCGGGGCG ACGGATGCGGTAAAATGTCGATTATTGCCCTCCACGTTCAAAGGCATGGCGATGCAGTGGTTCATTCGACAACCGCCCTT CTCCATTGATAATTTCACTGATCTGTCCACGAAATTTAGTTAATAGAAACAACAAATGTAAATGAAGTCGCACTCTTTTT CCCTTTCTTTGGAAAGGTTTTTAATGAGGCGACATTTGTAATGAAGGGACAATTGTTCCCATACGAAAGAAAATTAATGA AAAGATCATTTCAACAGAATCGCATATATTTTTTAATTTATATTACGAGTTCATGCAATGCAAATCGTATCAAGGTATGC AATACCGCGAGTAAACCTTTCGGAATAAGAGAGTATCGCCTTCAAAAGTTAAAAGCCTTGGCAATTCTAGTGGCCACTAG AAACCAAGCCTCGTCGAAAAATCGGCTAAGGTATGTAAACTAAAATAACAACGAAAGTTGGAAACAACTAAAACAACGAA TGAACTTAAGATGATATCCATTTAAAGTAGGGAAAAGGGGGCGACGCCCATACATGATTGGGAATGAAAATAAAAGACAG GGCAATGCCCAAAGAAAAATTTCAACTTCATAAAATAAAAACAAATTCAAGCCAGGTTCTTGTTGTTGGCGTTGTTGCCC TGGCTTGTCCCAGCTTGAGGATCTTCCTTCTCTTGATCCTCATTCCTGTGCTGCTCATTCCCATCCTCGCCATCTTCTTC AGGCTCACTCTCATCATCGAATTGGGGAAGGAGGTCGAGGCTAATGTCATCATCACCAACTACTTGACCGTCCTTGATCT CCTTCAGCCACCCAATGCGGGAAAGATCAAAGCCCGGCTCAACCACACTGGTCTGCTCTTTGGCCGCCAGAAAGCCTTGA GCATATTGAAGAGAAGCACGCCCTATGATGGAAGCATTCAGGCGATCATGTTTCTTCTCCAACTTTTGATATTTGGCTTG AATGGCAGTGTGCTTGTCATTTATGGCTTCTTTAAGAGACTTGGTCTTTTGAAGAAGCAGGTCCGAAGCAGCCAAGTCTT CAGTTAACTTAGCACACTTCTCCTCGGCAGATTTCAGCTTTTTGTTGGCAGTCTCAGCATCAGTTTTAGCCCGCTCATAG GCTGTCTTATAATCAGCTGCCTTCTTTTCATAACGGTTCTTGGCCGATATCAACTCCTTCACGCACTGAGCCATTCCCGC CACAGTACTGGCGGCAGAGAGCGCGTGATGGATCGCCACGGAAGCAATGTTGGGGGGGCCTTGACCGGAAATGTCCTTGT GAATCCGGTTGTCAAAAGTACGGGTCATGAATTCAAGCCCATTGAAGTGAGGATCCGACAAGTTCAGCAAGGGGGGAGGA GCCTCGCCACCAATGGCTGAGCTAGGGCCAGCTTGGTTAAATGGAGTTGGTGGGCGGTTGATTAGCGCGCTTGAATCTTG TTGAGGGGGCGGGACATTGTCATGTCCCTTCTTTTTCTCAGCCGAATGACTTTTTGGATCGAGAGTCGATTGGTGGAGAG GCTTACCACCAGCAGCACCTGAAGTTCTTTGACGTTTAGGGTCCCTGACGTTGTCAGAACCCGAAGTACCTTCATTCTTC TTCTTTTGCTCAGTTTCGGCGGCCCTCTTCTTCGCCGCCGCAGCAGACTGGGCGAGGTATTCCTTCATCTTGATTGGGTT CGCGTCAATCTTGCTTTTTCCCATCGTAGCTGTATGGAAAACACCAATTAGACGAGATACATGAACAAAAAGAAAAACAA GTTATGTGCAAAGATTATAAACTTACTAAAAAATTGGTTTAAAGTGCCGGATTTCGACGCCTCAATCAAGTCGTGACCAG AAATTACTGGTAGTGTGCGGAGGTAATCGGCGACGCCTTGTTCAGATTCATCCAAGGCGTCGTATGAAACGGATATTTTT CGGCGAGGGTTCTTTGTCCAGTAAAAAGGGAAGAGAGGGTTATTGTCGGAATCTCGGAACAAGTTCTTTATTTCGGGCGA CTCCATAACTTTAAAGTATTTTTTCTGCCATACTTTGTAATGGCTTTTAAGGGCGGTGAACCGACTCATGTTCTTACGGG CCAAAAGTGGAACCCATTTCACAGAAGTAGGTTTAGTGGTGACTGATTTATAGAAAAGGAAGAACAAAGGATAGGTTGGG GTGAAACTCAAGTGTTCACAAAGAATTTCAAAGCAGCGGAGAAAACCCCAGGCGTTGGGCTGGAGTTGGCAAGGCGCCAC ATTCAGAAAAGAAAGAACGTGACATATAAACGGCGAGAAAGGAAGTTTGATGTTCAAGTCTAAGAAGAAATAGCCATAAA CAAAGAAGAAATCGGGCGATTCATCGGCTGGTTCTTTACGCAACAGAACACAGTCATCTTCGCCACATGGGAGGACATTC AACAGATGATCCTCATTATTCGAGGTGGCGGGATTTATCTTCGTGAACCCTTGAGCAGATATTCGAAGCGAATTAATGCT CCCAACGCTGCTCCAGATAGAACGCAACAGACATTTATCTTCAACTAAATGCACGTCAGAGCGCCATTCAGGTGAAGACA AATCTCCATTAGAGGAGAGAATTGAGTCTACAGATCCGGCGGGACCGGAATCATCATGGGTAGAAGGCGAGGAGTGAATT TCAATTATAGAGGGGGCGACAACTTCCTCCTCCGTGGAGGGTGAAGAAAGTTCTAGGGAAGAAAGGCTAGCGTTTGGTAA AGACATGCGAGGCAGTTTCATAAAAAAAAGAAAGAAGATGAACAAACAAAAAGAAGAAAGAAGATGAACAGAATCAGAGA AAAAAAAGAAGTAAACGAAGAATCTCAAGAAAGAGAAAAACTAACCAGGGGAAGAACTATGGATTTGAGAAAGGAGAACG TCGGCAATAGGGGAGCACCGCGCAATGACGACGGCCGGAGGAAGAAAAGGTTTACCGGAGTTCAAAGAAGAGAATGAAAG CTGCGGTGAAAAGATTTTCAGAACAAAAGTTTTAAGAAAGTGAAAAATGAAAAGTGAAAAGGGGTTTTTATAGAGAGAAA GGAGGAGAGAGAATGAGTGGGGGAAGATCGTGGGATTTGAAATTCGAAAAGGTAGGAAGCGAAAAGACATTACTCCTCGA GACGCACAACTGAAAATTGCATTTATAACAAATGATGACGAAATCCCGGAAAACAAGGATATGTGCGTCAGTTGAAAAGA CGTGATTGACGGTTATGATTAGAGGCGACATATCTTTGAAACGGCAACAAAGGTGGCGAAGCGTGAAAATGGCGATGTAA CAACAAAAGTAAAATGGCGATGAACGAATAAACAATAGAGGCGAACTACTAGGTAACGATGAAGACATTTCGACTCATTA CTCGAGTCTCATGTCTTGGGGGCATGTGGACTGGGCGGGACATAAAAGGAGATTATGCCCGCCCAAAATGAACAATAAAC GATTGAAGACAGCCACGGCGGGAATGACGACACAACGAGCTTCTTTGCCCATCCTTAGGTGGACCCGTAAGCCAGCTGGA AGATTCCTTTGGATTTGTCTTATATGTACATGGATTTGGGCCCTGATTGTCAGGCCCAAATATAGGAAAGGTCCATATCA TGACCACCCCCTCTATAAAAGGGGAGGTCATCCACTTGTACGAAACCAACTTTTCAGCATTAATGAGAATATTCTTTTTA TGGTAGTTTAGCTATTTTAGTGCTCTGCTAGGGTTTACTTTCTGTCATTCTTTTGTGTAAGCTTGCCCTAGTACAAAACA ATTTGCTATGACAGTAAGGGCTTGATTTTCTCTGAGTACG 

CDS sequence (LotjaGi3g1v0091000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTACCTCAAGCATTAGCTATACCTGCCTTTCCCTTGCTCTTTCTGATATTACTTTTCATTCTGTCACTTGCCCTGCT TCTAAATAAAAAAGAACATAAAAATGGTAGGAAATATCCACCAGGTCCCAAACCTCTGCCAATTATAGGCAACCTCCACC TGCTGGGTAAACTCCCACACCGCTCCATTCACGAGCTTGCCAAAAAATATGGACCCATCATGTTCTTAAAGCTAGGACAG GTCCCAACCATTGTGGTTTCGTCCCCTGAAACAGCAGAGCTAATCCTCAAGACCCATGACTCTGTTTTTGCTAGCAGGTC TTTAACTCAAGCATCCAAATACATTTGTGGACTGGGCGGGACATAA 

Protein sequence (LotjaGi3g1v0091000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLPQALAIPAFPLLFLILLFILSLALLLNKKEHKNGRKYPPGPKPLPIIGNLHLLGKLPHRSIHELAKKYGPIMFLKLGQ VPTIVVSSPETAELILKTHDSVFASRSLTQASKYICGLGGT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 5 5 -
SignalP_EUK 1 25 25 -
TMHMM 5 27 23 -
Phobius 6 28 23 -
PANTHER 14 115 102 3.0E-23
PANTHER 14 115 102 3.0E-23
Gene3D 25 121 97 8.0E-29
Phobius 29 121 93 -
SUPERFAMILY 36 116 81 1.23E-21
Pfam 40 106 67 1.7E-13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
Molecular function Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0091000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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