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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0097700 |
| Transcript ID | LotjaGi3g1v0097700.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)H dehydrogenase (Quinone); TAIR: AT4G27270.1 Quinone reductase family protein; Swiss-Prot: sp|Q6NQE2|FQRL1_ARATH Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1; TrEMBL-Plants: tr|I3S201|I3S201_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0097700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12167764..12168868) extracted from Lotus japonicus Gifu genome v1.2.
TACTACTCAATGTACAGGCATGTGGAGAGACTAGCAGAAGAAATAAAAAAGGGGGCTGATTCTGTTGAAGGTGTTGAGGC CAAACTATGGCAGGCAAGTATATATATATTTTATCCTAAGCATTCAATATATCATTGTCCTCTGAATTAAGTTAGGTTCA GATTTTCCTTCATGCTTTCCAATGTTTCATGACATCTCAAACTTTTAACCTCAATCATTGCTTTTTCATGTTTCAACACG ACTTATGCCAAGTGAAGGACTCCACTAGCTTTTGGACCTTTCTTTTTGTGACAATTTGTAGTCAATATGATACAAAAAAA ATTGTGCTCAAATTAATTTTTGTATGATATGAGAAGAGTACATTTCAAGTTTTCTTTATTGACTACATTGAAATTTTGAG CAGGTACCAGAGACATTGCCAGAAGAGGTGCTTGGTAAGATGGGGGCACCACCAAAGAGTGATGTACCAATCATTACCCC TCATGAGCTCTCTGAGGGTGATGGATTTGTGTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCACAGTTTAAAGCTT TTCTAGATTCAACTGGAGGTCTATGGAAAACACAACAGCTTGCTGGCAAGCCTGCTGGACTCTTCTACAGCACAGGTTCC CAAGGTGGTGGGCAAGAGACAACAGCGTAAGAGTTTCTACCTGATAGCATGTTCGGAAATCTTTCTACTTTAATTGATTC GAAGTTAGAATCGATTCTGGGGAAAAGCTTCTCTGAATAGCTTGTGATCACCAGAATTTGTTAAGGAAAAATATGTTGAT TCAAATTAAACATGCTATAATTACGATGAATGAAATGTTAATGACGAGGAATTTTGGAATTTATGTATGACAGGCTCACA GCTATAACTCAGTTGGTTCATCATGGAATGTTGTTTGTTCCAATTGGATATACATTTGGTGCTGGAATGTCTGTAATGGA TGAACTGAAAGGTGGAAGTCCATATGGTTCAGGAACTTATGCTGGTGATGGCTCAAGACAGCCCACAAAGCTTGAATTGG AGCAAGCATTTCACCAAGGGAAGTACATTGCTACCATCACCAAGAAGCTCAAGGAAGCTGCTTAA
CDS sequence (LotjaGi3g1v0097700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACAGGCATGTGGAGAGACTAGCAGAAGAAATAAAAAAGGGGGCTGATTCTGTTGAAGGTGTTGAGGTACCAGAGAC ATTGCCAGAAGAGGTGCTTGGTAAGATGGGGGCACCACCAAAGAGTGATGTACCAATCATTACCCCTCATGAGCTCTCTG AGGGTGATGGATTTGTGTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCACAGTTTAAAGCTTTTCTAGATTCAACT GGAGGTCTATGGAAAACACAACAGCTTGCTGGCAAGCCTGCTGGACTCTTCTACAGCACAGGTTCCCAAGGTGGTGGGCA AGAGACAACAGCGCTCACAGCTATAACTCAGTTGGTTCATCATGGAATGTTGTTTGTTCCAATTGGATATACATTTGGTG CTGGAATGTCTGTAATGGATGAACTGAAAGGTGGAAGTCCATATGGTTCAGGAACTTATGCTGGTGATGGCTCAAGACAG CCCACAAAGCTTGAATTGGAGCAAGCATTTCACCAAGGGAAGTACATTGCTACCATCACCAAGAAGCTCAAGGAAGCTGC TTAA
Protein sequence (LotjaGi3g1v0097700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYRHVERLAEEIKKGADSVEGVEVPETLPEEVLGKMGAPPKSDVPIITPHELSEGDGFVFGFPTRFGMMAAQFKAFLDST GGLWKTQQLAGKPAGLFYSTGSQGGGQETTALTAITQLVHHGMLFVPIGYTFGAGMSVMDELKGGSPYGSGTYAGDGSRQ PTKLELEQAFHQGKYIATITKKLKEAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 187 | 187 | 3.0E-110 | – | |
| PANTHER | 1 | 187 | 187 | 3.0E-110 | – | |
| ProSiteProfiles | 1 | 176 | 176 | 13.176 | ||
| TIGRFAM | 1 | 183 | 183 | 4.8E-59 | ||
| SUPERFAMILY | 1 | 184 | 184 | 4.97E-48 | ||
| Gene3D | 1 | 185 | 185 | 1.5E-65 | ||
| Pfam | 52 | 128 | 77 | 4.6E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD(P)H dehydrogenase (quinone) activity | Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi3g1v0097700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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