Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0097700 |
| Transcript ID | LotjaGi3g1v0097700.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)H dehydrogenase (Quinone); TAIR: AT5G54500.1 flavodoxin-like quinone reductase 1; Swiss-Prot: sp|Q9LSQ5|FQR1_ARATH NAD(P)H dehydrogenase (quinone) FQR1; TrEMBL-Plants: tr|I3S201|I3S201_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0097700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12167764..12168880) extracted from Lotus japonicus Gifu genome v1.2.
TACTTTCACAGGTACTACTCAATGTACAGGCATGTGGAGAGACTAGCAGAAGAAATAAAAAAGGGGGCTGATTCTGTTGA AGGTGTTGAGGCCAAACTATGGCAGGCAAGTATATATATATTTTATCCTAAGCATTCAATATATCATTGTCCTCTGAATT AAGTTAGGTTCAGATTTTCCTTCATGCTTTCCAATGTTTCATGACATCTCAAACTTTTAACCTCAATCATTGCTTTTTCA TGTTTCAACACGACTTATGCCAAGTGAAGGACTCCACTAGCTTTTGGACCTTTCTTTTTGTGACAATTTGTAGTCAATAT GATACAAAAAAAATTGTGCTCAAATTAATTTTTGTATGATATGAGAAGAGTACATTTCAAGTTTTCTTTATTGACTACAT TGAAATTTTGAGCAGGTACCAGAGACATTGCCAGAAGAGGTGCTTGGTAAGATGGGGGCACCACCAAAGAGTGATGTACC AATCATTACCCCTCATGAGCTCTCTGAGGGTGATGGATTTGTGTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCAC AGTTTAAAGCTTTTCTAGATTCAACTGGAGGTCTATGGAAAACACAACAGCTTGCTGGCAAGCCTGCTGGACTCTTCTAC AGCACAGGTTCCCAAGGTGGTGGGCAAGAGACAACAGCGTAAGAGTTTCTACCTGATAGCATGTTCGGAAATCTTTCTAC TTTAATTGATTCGAAGTTAGAATCGATTCTGGGGAAAAGCTTCTCTGAATAGCTTGTGATCACCAGAATTTGTTAAGGAA AAATATGTTGATTCAAATTAAACATGCTATAATTACGATGAATGAAATGTTAATGACGAGGAATTTTGGAATTTATGTAT GACAGGCTCACAGCTATAACTCAGTTGGTTCATCATGGAATGTTGTTTGTTCCAATTGGATATACATTTGGTGCTGGAAT GTCTGTAATGGATGAACTGAAAGGTGGAAGTCCATATGGTTCAGGAACTTATGCTGGTGATGGCTCAAGACAGCCCACAA AGCTTGAATTGGAGCAAGCATTTCACCAAGGGAAGTACATTGCTACCATCACCAAGAAGCTCAAGGAAGCTGCTTAA
CDS sequence (LotjaGi3g1v0097700.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACAGGCATGTGGAGAGACTAGCAGAAGAAATAAAAAAGGGGGCTGATTCTGTTGAAGGTGTTGAGGCCAAACTATG GCAGGTACCAGAGACATTGCCAGAAGAGGTGCTTGGTAAGATGGGGGCACCACCAAAGAGTGATGTACCAATCATTACCC CTCATGAGCTCTCTGAGGGTGATGGATTTGTGTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCACAGTTTAAAGCT TTTCTAGATTCAACTGGAGGTCTATGGAAAACACAACAGCTTGCTGGCAAGCCTGCTGGACTCTTCTACAGCACAGGTTC CCAAGGTGGTGGGCAAGAGACAACAGCGCTCACAGCTATAACTCAGTTGGTTCATCATGGAATGTTGTTTGTTCCAATTG GATATACATTTGGTGCTGGAATGTCTGTAATGGATGAACTGAAAGGTGGAAGTCCATATGGTTCAGGAACTTATGCTGGT GATGGCTCAAGACAGCCCACAAAGCTTGAATTGGAGCAAGCATTTCACCAAGGGAAGTACATTGCTACCATCACCAAGAA GCTCAAGGAAGCTGCTTAA
Protein sequence (LotjaGi3g1v0097700.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYRHVERLAEEIKKGADSVEGVEAKLWQVPETLPEEVLGKMGAPPKSDVPIITPHELSEGDGFVFGFPTRFGMMAAQFKA FLDSTGGLWKTQQLAGKPAGLFYSTGSQGGGQETTALTAITQLVHHGMLFVPIGYTFGAGMSVMDELKGGSPYGSGTYAG DGSRQPTKLELEQAFHQGKYIATITKKLKEAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 192 | 192 | 9.8E-118 | – | |
| PANTHER | 1 | 192 | 192 | 9.8E-118 | – | |
| ProSiteProfiles | 1 | 181 | 181 | 15.642 | ||
| TIGRFAM | 1 | 188 | 188 | 3.2E-63 | ||
| Gene3D | 1 | 190 | 190 | 4.5E-70 | ||
| SUPERFAMILY | 1 | 189 | 189 | 5.74E-52 | ||
| Pfam | 6 | 133 | 128 | 5.1E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD(P)H dehydrogenase (quinone) activity | Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi3g1v0097700.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…