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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0097800 |
| Transcript ID | LotjaGi3g1v0097800.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)H dehydrogenase (Quinone); TAIR: AT4G27270.1 Quinone reductase family protein; Swiss-Prot: sp|Q6NQE2|FQRL1_ARATH Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1; TrEMBL-Plants: tr|I3S201|I3S201_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0097800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12177119..12179085) extracted from Lotus japonicus Gifu genome v1.2.
GTGCAATGGAATGGACTCAATGGAGTAGTGGGGGAACCTAAACAAAACCACAATGCAAAGCTCATGGTAAGCATGACGCT ACCATGTCATCATCAATAACTTTCGGGTCAAAGGTGTCACTATTTCCCAAGGAGATGCAAAATTTGAAGAAAAAAACACA ACGAAGAAATCAAATGAGAATTTGATAGAATGTCAAGCAAAGCCATCTTAATCAAATGTTATATTCACCTATAAATATGG CTTGCTCATTCAACTATTCTGCATTCCTCGACTCAAGTATTAGTAAAGCACAGAAACACAGAGATTCCTTAGAAGATCAT CAATGGCTGTAAAAGTTTATATTGTGTATGCATCTTTTGATCTATCTTGTATCATTAATTTGCTTTCCTTAACTTGTTAA GATCTTTGTTTATATGCAGAGATATTCTCTGTCTCACATTGTCTTTGTCAATCCAATTTTGATCAGATTTATTGACAAAA TGAAAATTTTGCATTACTTTGACAGGTACTACTCAATGTACCGGCATGTGGAGGGACTAGCAAAAGAAATAAAGAAGGGA GCTGATTCTGTTGAAGGTGTTGAGGCCACACTATGGCAGGCATGTATATTTATGTTTTATCCAACAAATTCAATTTCATT AAAGCATGAAATTGCAAATAATTAGTAACACCCAATACACAAACAAAATAGTATTTCTTCAATGTATTATTATTACCCTG TTGGCAGTTTTAGATAGTTATGTACTTATAGCTGATGATTGATTTCAATATATCATTGTCCCCTGTAACAAGTTCGGTTC AGATTTCCCATCATTTTTTTTCCAATGTTTCATGACATCTCTAAACTTTTGATCACCTCAATCATTGCTCTTTTAACACT ATACCAAGTGAAGGACTCCACATGCTTTTGGACCTACATTTTATGACATTTTGTAGTCAATATGATATAAAAATATTCTG CTCAAATTCACTTTTGCTAAATATGAGAAGAGATTTTAAATTTTCTTTGTTGACTATATTGAAATTTTGAACAGGTACCT GAGATACTGCCAGAAGAGGTGCTTGGTAAGATGGGGGCTCCACCTAAGAGTGATGTACCAATCATTACCCCTCATGAACT CTCTGAGGGTGATGGATTCGTGTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAGTTTAAAGCTTTTCTAGATT CAACTGGAGGTCTATGGAAAACACAACAACTTGCTGGCAAGCCTGCTGGACTCTTCTACAGCACAGGTTCCCAAGGTGGT GGACAAGAGACAACAGCGTAAGAGTTTCTACCTGATGATAGCATGTTTGGAAATCTTTCTACATTGATTTATTCAAAGTC AGAATCGATTCTTGGGGAGAAGCTTCTTTGAATAGCTTCTGGTTACCAGAATTGAGTTTGATGAAAAATAGGTTGATTTA AACATGATATAATTAAGAAGAATGAAATGTTAATGGTCAGGAATTGTGGAATTTATGTATGACAGGCTCACTGCTATAAC TCAGTTGGTTCATCATGGAATGTTATTTGTTCCAATTGGATATACATTTGGTGCTGGAATGTTTGAAATGGAGGAACTCA AAGGTGGAAGTCCATATGGTTCAGGAACTTATGCTGGTGATGGCTCTAGACAGCCCACAAAGCTTGAATTGGAGCAAGCA TTCCACCAAGGGAAGTATATTGCCACTATCACCAAGAAGCTCAAGGAAGCTGCATAATGTTGGTTCAACAAAGACATACA ATTCAAGGATGCTTGAAAATCCTAAAGCATCTTCTATTCATATAGAATGTTGAGTTCAGTTTTTTGTGGTTTCCAGTAAT ACACTTTTATTATTCAAAAAGTCAACGCTTTGTATTGAGTTTTATTTTGCTGTTGTAACTTGTATGGTACTGTGGTTATT GATTTGTCAAATAAAGAAGTTTGTAAGATTTTTGCAATAGGCTAAAA
CDS sequence (LotjaGi3g1v0097800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTAAAAGTTTATATTGTGTACTACTCAATGTACCGGCATGTGGAGGGACTAGCAAAAGAAATAAAGAAGGGAGC TGATTCTGTTGAAGGTGTTGAGGCCACACTATGGCAGGTACCTGAGATACTGCCAGAAGAGGTGCTTGGTAAGATGGGGG CTCCACCTAAGAGTGATGTACCAATCATTACCCCTCATGAACTCTCTGAGGGTGATGGATTCGTGTTTGGCTTCCCAACA AGATTTGGAATGATGGCTGCTCAGTTTAAAGCTTTTCTAGATTCAACTGGAGGTCTATGGAAAACACAACAACTTGCTGG CAAGCCTGCTGGACTCTTCTACAGCACAGGTTCCCAAGGTGGTGGACAAGAGACAACAGCGCTCACTGCTATAACTCAGT TGGTTCATCATGGAATGTTATTTGTTCCAATTGGATATACATTTGGTGCTGGAATGTTTGAAATGGAGGAACTCAAAGGT GGAAGTCCATATGGTTCAGGAACTTATGCTGGTGATGGCTCTAGACAGCCCACAAAGCTTGAATTGGAGCAAGCATTCCA CCAAGGGAAGTATATTGCCACTATCACCAAGAAGCTCAAGGAAGCTGCATAA
Protein sequence (LotjaGi3g1v0097800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVKVYIVYYSMYRHVEGLAKEIKKGADSVEGVEATLWQVPEILPEEVLGKMGAPPKSDVPIITPHELSEGDGFVFGFPT RFGMMAAQFKAFLDSTGGLWKTQQLAGKPAGLFYSTGSQGGGQETTALTAITQLVHHGMLFVPIGYTFGAGMFEMEELKG GSPYGSGTYAGDGSRQPTKLELEQAFHQGKYIATITKKLKEAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 203 | 203 | 2.4E-125 | – | |
| PANTHER | 1 | 203 | 203 | 2.4E-125 | – | |
| Gene3D | 1 | 201 | 201 | 4.1E-75 | ||
| TIGRFAM | 3 | 199 | 197 | 2.1E-68 | ||
| SUPERFAMILY | 4 | 200 | 197 | 3.3E-56 | ||
| ProSiteProfiles | 5 | 192 | 188 | 18.816 | ||
| Pfam | 19 | 144 | 126 | 6.9E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NAD(P)H dehydrogenase (quinone) activity | Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi3g1v0097800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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