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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0105600 |
| Transcript ID | LotjaGi3g1v0105600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DCD (Development and cell death) domain protein; TAIR: AT2G32910.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|K7KJN7|K7KJN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0105600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13081541..13087574) extracted from Lotus japonicus Gifu genome v1.2.
TGTCAGTCAGAATACAGAATAGTGATTAGATACATAGACAGGGTTCGAGGTTCTCAGAATTGCGGTTGGTTTCAGTTCGA AGCACGTCCCAGCCTGCGTTTTCAACGCAATCTCTCGCTATCTAACGTCAGGATCACTCACCTCTCAAAGGTACTCTCTT TGTTTCGATCACTGCTTTTGTTCTTGTGTGATCCTGTGGTTTTGGTTTAGATGCCTTAGCTGATTGGTTGATCAATATGG GAATCTAAATTTGATGAATTGGATTGTTTTTCGGGTACCCATTTGGCCCATTACTGATCATCTGTGGATTTTGTCATCTG GGTATCATTGGTTTCTTCCTGTGTTTCTCTGGACTGGAAGTCCTCCAGAAATTATTTTTATTGTTATTATTATTAATTTT GTTGTTGTTGTTTAGATTTTTGTGATGTTTTGCTTAGGTGTTTTGTTAGTTAGCTTTGACATTTGATGTTAGAGTTGGTG GTGGTGCTACCTACTTCAGAACTCTGGCTTGTGCTAATGTTTTAAACTTTTTCTAAGAGATTTGAGTGATAGGGTTCAGT TTGATTATACCTTCTCCCTTCCCAGTCTTGTTTTCCCTCCCTTGTTTCAACTTTTAACAGAATTGTGCGGTTGCGTGTTG GGGGGACTTTGTATGTGTATGTGTTCTTCGCGCGCGCGCGTGTATTTCTTTGTGTGTCTATCTATAGTTGTGGCCACCGG CCATGTAGGTTGCAGGGTTTTACATTTAATGTAGGTAAAAACCCATATACTTTATAGTGGGAAAAAAGGTATGTCATGTG TTGGTTAAAATGTAACATAATGGCATGATCTTTTGTTAATTTCAAAAGGAGAGTAGTCATGTTGTGAACTGCTACATTTG ATTTGAGAAATATTGAGCATGATCACTTTAAATATTTCAGCAATTAAAGACCGGAGTTATTTATTGTATCTTACTTCATG CATGATTGTGATTTACGTTGTCAATCCCGCGGGATAGTGAAGGCCCCAGTTTTCCAAAAAAAAGCCCCCAAATGTAAAAT TTGGTTTACATTTGGGGGTTTTTATTTAGGGGTATTTCCGGGTTTTCGGAACAGAAAAAACCCTAGCACTTTGATTTTGT TCGATCTTTCCCTCTCTTCTACCCACATCGACCCTCTTCTTCTCTGTTCTATTGCTGCATCTTCCCTCTCTTCGACCCAG AATGGCCGGCGACCACCAAGACAGTACCTCCGACCTTTCTCCGGCGAGCATCACCTCTGTTCTACCCACTTCGACCCTCT TCTCCTCTGTTCTATCTTGTATTTATCATTGATTTAGTATGTATGTATATATATATATATGGTATAAATTATGCAAAATA TAGACAAAAATTCACTATCCCGGCCATCCCGCTTTCCGGGAACCCGCTATCCCAGTTTTGAGGCTGGCCGCGATGAGCTG GGAAGTGGGATTGACAACATAGATTGTGATGTTACAGCACCATCACGTTGTGTGGCAGAAGGTGGCTGCTACACGTGCAC GTTCACTCGTGTTTTCTGGTTGCTTCTGTCTTGCTCAATTTCTGCCACCAAGGCTGTTATCTGAACGTGTGCTAATACCC ACATTCGTCCTCGATTTCTGGGTTTATGAAGCATCTTTTGCAGGGATACACATGTTTTGTCTGCATCATTTGCTTAAAAA TCATACATGCTTTGAAACCCTTCTTCATTGATCATTCATGCAAAAATGTAATCTCTGTTTTGAACTCTTCTGTCTAACCT AGTGATACACTGCTCACTGGTGTCATTTTGTGGTGAACTTGGTGTTTTCTGATCTCCGACCCTCTGCTTGCAGATTTCAG TTCTTCATTTGGTCTTAGTTCACCGGTCAGAGCTCCTTGTTCTGTTTTTGTTTCACAGCTCACAGGTGTCTTCCCCCCCT GTATTCTTTTCACTCTTCTTCCTTCATATTTCACCGCTCACATTCTTCTAATTTTATCTAATCTATTCTGTTTTTTACCT GTTAATTCTGTCATCTGTTTTTGTGTGTGTGTGACTCTTTTTACTTCATTCCTATGTTCTTATATCTACTAGGGTGGTGG AGATTGTATGCTTAGACTATGACTTATTATTATTTATTATGAATGTCTTTGTTTTGGGTAATTATTTATTTTTGACTTAT TTTTGATATTATAATCTTCCATATAGAGCCCCTGCTCTATTTGCTATCCCAGTGTAGTGTTTATAGACCGCTATCTGGAA TTGATGGCTATGTTAACGACTTGGGCTATTGTTTTATAAACTATTTGTTGATTGTGTTATTTTGGGATTTTTTTTTGGGA ATTATGCTACATTATATAACCTGCATGCATAGAGGATAATGAGTAAAGTGTTGTACTTTTATATGTAGTACTTTCGGGAC AAATTGTGGCAGTATGAATAGGAAATGAAAACGGAAAAGGAAAATAAATCAAATGGGCCCTTGAGGTTGTTGTATGATCA CATCACATAATATGTCAAACTTATTTGCTGTCCAATTTACAGAACTTATTAATTGGAAAATATTCTCCTTTTTACCTTGG GGTGTGTTATCCAGCCCCATTGGTTAATACTGCCTTTGAATTTTCTCATTTAGTTTGAGAAACACATTGTAAACTTGAGC TTATGTTTCGTAAGTTTTCTGCTGTCAATTTTTCTTGCATTAACTTGAGCTTTTCTATGAATTGATTTCTTGTGATGTTT ATAGAGCTGATTAAACATGAAGTTATCTTAGCTTCCTTAGCCATGTGATTGAACTTTCAATATAATGAAGTGTTTGTACA AGCAGTTGTGATCCCGTCCCCTCCTTTTCATGGCTTCAATTGCAATGACTTTAGACATCAACAGAAGTTATGAACACTAT TCCTGTGTTCTTATTTGACAGCAGTTTTGGTCAATTGGTTTATTAACACTTTCATTTTTGTTTATCCTTTCATTCTATTT TCTTTTCAAATATCGGCCTCCTTCCTGATTTATTGTCGCCTTTTCTGGTTCATGTGAAAACCTCTAATATTTGCTTTATT TACATTAGCTGTTTGAATGTTGTGCTGAACTGAAGAGAGACGCAGATCTGAATTACTTAATAAATTCTTCACAAGCCTAA ATGATCTTTTCCTGCCTCAGACCCAATGGCGAAGAGTTTGGGTGTCTCTCATTTGTGATAATCAGTCTGCCTTGCAAATT GCCTCAAACCCAATGTTTCATGAGAGAATCAGACACATTGAGATAGATTGTCATTTTGTTAGAGAGAATATCGCATTAGG GGACATAAATACATGATTTACAGTTACCATAATTACATTATTTCTACCAAATACATGCTCAAGCTCTTAATTAACATTAG TCTTTTGGTCTAATTGTTTTTAACACTTTCTTTTCATCCTCCTGTTCTTCTCAATCAATCTTGGTCTCCTTTATTTAGTT GCTGTTGCATTTTCTGGTTCATGTGAAATATCAATCAATTTTAAATATTTGTTTTTTTAATGCAGTAACATTTGCCTGTG AAACTGTGTGCTTCTTGTACCTTTATGTTATGGCACAAAAAGACCGCAAGAAGGGCACTCAGAATCCTCCAGGGCAAAAT GATCGCAATAAGGATTCAAATCCTCCTAAAGGGTCTGGTGAACCAGAGTCGAGTGACAAGAAAACTCCATGGCCACTGAA GGCCAAATCTAAAATCGTTAAGAAATCTAAGGGTGGTAAGTTTAAGACCATGAATAAAGGTTCTCAACAGATTGGGGAAT ATGGAAGAAATAGGAAGAACAAAAAAGTAGTAGGCCATAGTGATGAGCTGCCTAAAGAGAAGAGAGAGAAAGCTGAAAAG AATGAAGAGAAGGAAATTGAAAATGGGAGCACTAGTGGCAAACGTCCTGTTGAGAATAGAAGGCTGTGGTTTAAAAGAGA TAAGATTGTAAAGTTGGATAAGAATGAACCAAAACTGAACAGTGAAGAGAAGAATAGAGAGTCGGACCGGAATGCGAGGA GTAGAGTAAACAAAACCAAAGATAATGGTACTGAAAATACTGAATCAAGTGAGAGAAAGAAAGAAAAACTTGGTGGTTTC ATCTTCATGTGCAATGCGAAGACAAAACCTGACTGTTTCCGCCATCGTGTAATGGGTGTTCCAGCCGGTAAACAAGAGAT TGTTTTAGGTATAAAGCCTGGGACTAAGCTTTTTCTGTATGATTTTGATCTGAAGCTGTTGTATGGGATTTACGAAGCTT CCTCTTCTGGTGGTATGAAACTTGAACCCCGTGCTTTTGGTGGTAACTTTCCTGCTCAGGTTAGTTCCTCTCATTTATTT CCTTTATCTAATTTGTCCTGATGTTTTTATTTATTATTATTTATGTTGTGTTGATGGTGTAACCTTCAGGTGCGGTTCAA GGTTGCTTCTGATTGTTTCCCAATACCTGAAAGCATTTTCAAGCAGGCCATCAAAGAAAATTACTCTGAAAAGAACAGGT TCAAAACAGAACTTACTGTTAGACAAGTGAGTATAAAATGTTGCCTCTGATGGGCTAGCTGTCAATGTATTTTACTCTAT ATCATTGATGATATTCAAATGTCTTCTTCCAGGTTAGGAAGCTCAGTGAATTTTTCCGACCAGTGGGTATTCATTCATCC TCGCAGCCTGTCCGCTCCCCTCCAAAAGCAATAATTCGAGATAGGGAAGCTGTTGATGGTGTTGGGAGGTCGTGGCCCCA TTCGCATAGAGAAATACCTCATGTGCTGTCTCATGAAAGAGATGCGGGATTTGAACCGCAAGAGGAAGCTCGTCATGATT TATTTCTTACCGAAAAGAGTTACCGAGCTTATGGTCTCCAAGGACTCCAAGGAGAGAGAAGAAATGTGACTTCAGCTTCA CTAGTTAATCCCATACATGATCCTTATGAGAGGGGTTATGAGAGAGAGCACCTTCATCAGGTGGACCCTGTCTACAGGAA CATTGTCCCTGCACATGTAGAAAGTCTTCATGCTGATCCTCTTCGGAGTGAACACCAGACCTATGGTAATGGTGCTGCGA TTTCTGAACATGCATATGTAGAAAGTCTTCGTGCTGATCCTCTTCGGAGTGAACACCAGACCTATGGTAATGGTGCTACG ATTTCTGAACATGCATATGTAGAAAGTCTTCATGCTGATCCTCTTCGGAGTGAACACCAGACCTATGGTAATGGTGCTGT GATTTCTGAACATGCATATAATCCTTATCATGCCTATCGCTATGGTGCTGCAATTTCACCAAGGGGTTCATATTTGCCAC CGTTGAGTAGAGAAGAAATTGGGGGAAGAACGCTGATTGGAACTGATGACTTACAAAGGAGAGAGGCTGTTCCAGATAGG CTTTACTCAACATATTCTACTGATGACTTGCAAAGGAGAGAGGCTGTTCCAGATAGGCTTTACTCAACATATTCTGCTGA TGACTTGCAAAGGAGAGAGGCTGTTCCAGATAGGCTTTACTCAACATATTCTGCTGCTGATGCTTTGTCTGAATATAATC GGATGCAGCACTACCGGGGAGGACAATTGGAGGATGTAGCTGTTCCGGTTTCATCTCGATACTCTTTTGCCTCTGGCCCT TCATATTCCCTCCGTTAAATTAAATTTACCGGATTAATCCCCCTTTTCATATGTTCCTTAAAATTTTCTTCTTTTCTGAT GACTGGCGGGAATTAAATAACTGTATGATATGTACTTTTTCTTAGGCACCTCTGGATTTTGAAAGCATTTTGTGTTGGAA CTGAGATTCAATGTGCTAAATGCCTGGTTTCCTGGATTTAAAGGATTTCAGCAATTCTGGTTTTCATGTTCTTGCAGGCT GATAATTTCCGTAGAATTGGTTTGGAAATCATGTATGATTTAGTTAGTCCATTTGGTCTTGAATGTGGGATACTTTGTAT GTTTAGGGCTTGTTTGATTCCGCTTTTTGAAAACTGTATTTTTATTTTTGAAACTGAAAAAAAAAACTAGTTTTAGAAAC TTTTTTTTAAAATGCTTGAATGAGATGTTTTCCA
CDS sequence (LotjaGi3g1v0105600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACAAAAAGACCGCAAGAAGGGCACTCAGAATCCTCCAGGGCAAAATGATCGCAATAAGGATTCAAATCCTCCTAA AGGGTCTGGTGAACCAGAGTCGAGTGACAAGAAAACTCCATGGCCACTGAAGGCCAAATCTAAAATCGTTAAGAAATCTA AGGGTGGTAAGTTTAAGACCATGAATAAAGGTTCTCAACAGATTGGGGAATATGGAAGAAATAGGAAGAACAAAAAAGTA GTAGGCCATAGTGATGAGCTGCCTAAAGAGAAGAGAGAGAAAGCTGAAAAGAATGAAGAGAAGGAAATTGAAAATGGGAG CACTAGTGGCAAACGTCCTGTTGAGAATAGAAGGCTGTGGTTTAAAAGAGATAAGATTGTAAAGTTGGATAAGAATGAAC CAAAACTGAACAGTGAAGAGAAGAATAGAGAGTCGGACCGGAATGCGAGGAGTAGAGTAAACAAAACCAAAGATAATGGT ACTGAAAATACTGAATCAAGTGAGAGAAAGAAAGAAAAACTTGGTGGTTTCATCTTCATGTGCAATGCGAAGACAAAACC TGACTGTTTCCGCCATCGTGTAATGGGTGTTCCAGCCGGTAAACAAGAGATTGTTTTAGGTATAAAGCCTGGGACTAAGC TTTTTCTGTATGATTTTGATCTGAAGCTGTTGTATGGGATTTACGAAGCTTCCTCTTCTGGTGGTATGAAACTTGAACCC CGTGCTTTTGGTGGTAACTTTCCTGCTCAGGTGCGGTTCAAGGTTGCTTCTGATTGTTTCCCAATACCTGAAAGCATTTT CAAGCAGGCCATCAAAGAAAATTACTCTGAAAAGAACAGGTTCAAAACAGAACTTACTGTTAGACAAGTTAGGAAGCTCA GTGAATTTTTCCGACCAGTGGGTATTCATTCATCCTCGCAGCCTGTCCGCTCCCCTCCAAAAGCAATAATTCGAGATAGG GAAGCTGTTGATGGTGTTGGGAGGTCGTGGCCCCATTCGCATAGAGAAATACCTCATGTGCTGTCTCATGAAAGAGATGC GGGATTTGAACCGCAAGAGGAAGCTCGTCATGATTTATTTCTTACCGAAAAGAGTTACCGAGCTTATGGTCTCCAAGGAC TCCAAGGAGAGAGAAGAAATGTGACTTCAGCTTCACTAGTTAATCCCATACATGATCCTTATGAGAGGGGTTATGAGAGA GAGCACCTTCATCAGGTGGACCCTGTCTACAGGAACATTGTCCCTGCACATGTAGAAAGTCTTCATGCTGATCCTCTTCG GAGTGAACACCAGACCTATGGTAATGGTGCTGCGATTTCTGAACATGCATATGTAGAAAGTCTTCGTGCTGATCCTCTTC GGAGTGAACACCAGACCTATGGTAATGGTGCTACGATTTCTGAACATGCATATGTAGAAAGTCTTCATGCTGATCCTCTT CGGAGTGAACACCAGACCTATGGTAATGGTGCTGTGATTTCTGAACATGCATATAATCCTTATCATGCCTATCGCTATGG TGCTGCAATTTCACCAAGGGGTTCATATTTGCCACCGTTGAGTAGAGAAGAAATTGGGGGAAGAACGCTGATTGGAACTG ATGACTTACAAAGGAGAGAGGCTGTTCCAGATAGGCTTTACTCAACATATTCTACTGATGACTTGCAAAGGAGAGAGGCT GTTCCAGATAGGCTTTACTCAACATATTCTGCTGATGACTTGCAAAGGAGAGAGGCTGTTCCAGATAGGCTTTACTCAAC ATATTCTGCTGCTGATGCTTTGTCTGAATATAATCGGATGCAGCACTACCGGGGAGGACAATTGGAGGATGTAGCTGTTC CGGTTTCATCTCGATACTCTTTTGCCTCTGGCCCTTCATATTCCCTCCGTTAA
Protein sequence (LotjaGi3g1v0105600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQKDRKKGTQNPPGQNDRNKDSNPPKGSGEPESSDKKTPWPLKAKSKIVKKSKGGKFKTMNKGSQQIGEYGRNRKNKKV VGHSDELPKEKREKAEKNEEKEIENGSTSGKRPVENRRLWFKRDKIVKLDKNEPKLNSEEKNRESDRNARSRVNKTKDNG TENTESSERKKEKLGGFIFMCNAKTKPDCFRHRVMGVPAGKQEIVLGIKPGTKLFLYDFDLKLLYGIYEASSSGGMKLEP RAFGGNFPAQVRFKVASDCFPIPESIFKQAIKENYSEKNRFKTELTVRQVRKLSEFFRPVGIHSSSQPVRSPPKAIIRDR EAVDGVGRSWPHSHREIPHVLSHERDAGFEPQEEARHDLFLTEKSYRAYGLQGLQGERRNVTSASLVNPIHDPYERGYER EHLHQVDPVYRNIVPAHVESLHADPLRSEHQTYGNGAAISEHAYVESLRADPLRSEHQTYGNGATISEHAYVESLHADPL RSEHQTYGNGAVISEHAYNPYHAYRYGAAISPRGSYLPPLSREEIGGRTLIGTDDLQRREAVPDRLYSTYSTDDLQRREA VPDRLYSTYSADDLQRREAVPDRLYSTYSAADALSEYNRMQHYRGGQLEDVAVPVSSRYSFASGPSYSLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 116 | 116 | - | – | |
| MobiDBLite | 9 | 30 | 22 | - | – | |
| PANTHER | 17 | 92 | 76 | 2.0E-184 | – | |
| PANTHER | 17 | 92 | 76 | 2.0E-184 | – | |
| MobiDBLite | 44 | 58 | 15 | - | – | |
| MobiDBLite | 72 | 108 | 37 | - | – | |
| PANTHER | 115 | 554 | 440 | 2.0E-184 | – | |
| PANTHER | 115 | 554 | 440 | 2.0E-184 | – | |
| MobiDBLite | 132 | 169 | 38 | - | – | |
| ProSiteProfiles | 172 | 299 | 128 | 60.724 | ||
| SMART | 172 | 299 | 128 | 2.0E-70 | ||
| Pfam | 175 | 297 | 123 | 4.5E-47 | ||
| PANTHER | 571 | 628 | 58 | 2.0E-184 | – | |
| PANTHER | 571 | 628 | 58 | 2.0E-184 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0105600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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