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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0106300 |
| Transcript ID | LotjaGi3g1v0106300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase, putative; TAIR: AT5G44640.1 beta glucosidase 13; Swiss-Prot: sp|Q9LU02|BGL13_ARATH Beta-glucosidase 13; TrEMBL-Plants: tr|A0A072V4Q7|A0A072V4Q7_MEDTR Glycoside hydrolase family 1 protein; Found in the gene: LotjaGi3g1v0106300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13157075..13162694) extracted from Lotus japonicus Gifu genome v1.2.
TCAAGTATAATATCAATGATAGCACTTGTTATAATACTATATTAACAACAAAAAAATTACTAATAAGGAAGTCTACAACT CTACCAATAAAAATACTGAAGCATCCCCTGACTCTGATATAACTAGATACTAGGATGGATATACAATTTTCTTTGGACAT GGTCCAATATTGAAGTTTATGGCCGGCTTTTTGTTCATTTCTGCTTAGTCCTTTCCTTTGTCTATCGGAGAGGTATGTTG TCCAAATCTTAATGATATTTAATGAAACTTTGCCTTAGAAAGAAGACCAAGTCTGATCTTCCTCTTTCCATAGATAAATA TAAATGCCAGTGATCCATTTAAGGGTGCAAATTAAAGTGTGAGGATCCATTCAAATTGGAAAAATGTGGTTTAAGGCGCT TCTTCTTGGGGCTGTTTCCATTGCCCTCTTTGAATCAGTTGCTTCTCTTAACTACAGCAGTTTCCCTGCAGGTTTTGTGT TTGGAACTGCATCTTCAGCTTACCAGGTTTTATTCTGGCCAGCAATCTTCTATTACTTTCACTTTATTCTGCTATTTTTT TTCATCTGACAATTATGTTGGATGTTATTTGTTGTTAATATTTTCACTTTTCACTCTAATTATATGTGCATTGGTCTATA TATGAACTATAAAGTATGAAGGTGCTGCATTTGAGGGTGGCAAGGGCCCAAGCATATGGGACACCTTCACTCATAAGTAC CCAGGTTAGCAGTTCGGAGCTTCTCTTAATAAACACTTTACGTGTTGATCTAAGATTCAAGTTTTTACAGTCATATTATA CTGATTTTACATGTTGGTTTGCGACATCTTAAAGGTTTAAAAGATTGTCATACTCCCTTATACATGTGGCATTCTATTCA TGTTCTTCATTCATGGTGCTGTATCCTGTAGTTGGTACTAGTTAATTTGACTTGAAAACAATCTTTTTTCCAGCTTAAAC TTATTTTTATATGGGAAAGAGGTTTACGCTATGTTTAGATGCGGATAAAAGAACATTTATTGAAGCTTATTTAGTGTTTT ACTAGTAGACAAAATTCAATTAGTGCTATTTAGTCCGCACACAACTGGATCTTACATTGATAATTTTATGAAAAACTCAT CCCTAAAGGACTCAGAATTACCTATTATTTAGATTATTGATATCTCCATGTCATTTTCTTGGTGCTTCAGATCGAATAGC AGACCACAGTAATGGCGATGTTGCTACTGATTCATATCATCGATACAAGGTATTTTCATTTTCTTCATTCAAATTTAAAT CTCTAGTTAGGGCCTGATTTGATTAGATTGATATTTTTTTTCACTCATCAAATAAAATTGACAGGAAGACGTAGGCATGA TGAAGGACATCGGTTTTCAAGCTTACAGATTTTCCATTTCTTGGCCCCGAATACTACCTAGTGAGAATCTGTCTAATCTT TCGTAGCTACTTTTAATTGTCTAGCTATCTTGACCTTGTAACATGTTTGAATCAACATTTTTTTCACCAGAATCGGTTCT GAAATCCAGAAGCTATTCACGAAAGCTTCTTCCAAAATTGACTCTAGCTTCCGTATTAACTGAGAATGATTTCTAAGCAT GCATTTAGTATAGTTGTTTCATAAGTAGATATTTTATCTTTCAAGATTTATTAAACTGTCAATTTGAATCATTAACTTGA GTAGTACTAGATAGAGGAATATAATTGTGATCAGTTTATATTGAATTGCACATATTAATGTTTTATCCATAGTACAATTG AGCTAAGAAGTAAGTTAATTTTCAGAAGGAAACTTAAATGGAGGAGTTAACCAAGAAGGCATCACATATTACAACAATCT CATAAACGAACTACTATCTAATGGTAAGCAGAAACAAACTTTCTCTTAATCTCTCTTAGGATCCCACAATTGCACGATAT GAGAATTGAGACCGACATTGGAAGTATGAGATTCTAATGTGGCCTTATAAGGCCTTGAACTCTCCAACTATGACCGCTAG TTTTTATGGTATAGTTGTCATAAGGCTTTTAGCCATTGATATCAGAGTCTTTCACCATGTCTCTTAGCGCGGGTTGTGAC ACTGTCATTGCAGTGTTTGCCCTTTCAAAGAGGTAATGAACAGCCTACCCACGTGGGCATGGGGCTGCGGAGCGTGGTGA GATGTTAGGATCCAATTCCAATGTCCTAAGGTTTTTATTACACTCTTGCATTCATAAAACCCCAAATCACACAATTTCAA CATAAATTTTATTGTAACAGGACTACAACCCTACATAACTCTATTTCATTGGGATCTACCTCAAGCTCTTGAAGATGAAT ATGGTGGTTTTCTTCATCCCAATATTGTGTAAGAGCGCGCACATCCAATTATCCTATCAAAGTAAAGTATGATCTTCAAT CTTAAATGCTAGGAAATTCATTCACACTTTTGATTTTGTTGCACAGGCAAGATTTTGCACATTATGCAGAACTATGCTTC AAGGAATTTGGTGACAGGGTGAAGCACTGGATCACTTTAAATGAGCCACTAATTTATAGCCAAATGGGTTATGCAAGTGG TGCTGCATTCCCACCAGAAAGGTGCTCCTTGTGGGTCTCCCCAAATTGCACTGCTGGTGATTCGGCCACTGAGCCTTACC TGGTTGCACACCACCAGATTCTTGCTCATGCTGCAGCAGTGAAAATATACAGGGACAAGTACCAGGTCACACAAACTGCA TAAGATAAACTGTATTTTAGGGAGTGAACCCTCAAATTTAACCCTGAAAGATACGGTATCAAACAAGCTAGTCCACAAAA GAAGGAAATAACTTTAAAAGTTTCTGATTGTGTCAATTGCAGGTCAAGTTGGTCCGTGTATCACTTCAAAAGACCCTAAG TGTCAGTTGATCAAAAGTGATTGAGGGACTAAATTGACCGACAATTAACGCATTCAGAGACTTTTAAAGATATTTTCTTC TTTCTGTGATCAACATGCCCGACACTGTATTTTTCATGGGCGAATTTGAGGATTCACTGTTTTTTATGCAACATAATGAT TACAAAATTGACCAATGAATTATTTTCTAATAGATTTCTCAGAAGGGTCAAATTGGGATAACACTGAATGGTTTCTGGTT TGAGCCACTGTCCAAATCAAAAGCTGACAAAGATGCAGCCTCTAGAGCCATTGCTTTTACAAATGATTGGTAAGTGGAGT GAAACAGCATTTTGGTTCTTGAAAGTGCAGTAGTGATTTAGTCATTTATGTCCTTGAAAGAATGAAATTAATCAAAAAAA GTACCTGAAAGAGTGAAAATCTCGGTCAATTCAGTCTTGGAAAACATATTGAATAATGAGTTAATGGTGAACTTGGTTCC TGAAAGATTTTGCCTCTGACAAGTTAGTCTCTGGAAGTAGGATATACATTCAAAAGCCCCTGAATGTATAAACTGTCAGT CAGGGACTAACTTGACAGATACTTTAGTAGATGAAATTCGACCGTAAGGACTAACTTGACCAAAGTTTTACATATTTAAG AATTATTCTACGTGTTTCTTTCTTCTGAGGAAGAAAGTGATAGTACCAAAATCTTTCAGGGACCAATTCGAAACAGTGTA TGCAAAAGCTAGTAGTATCTTGTCTTCGTTTGTAAATCTGTTGTCTGCATTTTCTGTATTTTAACTGCATTATTCTATTT TTCTAACACATGTCGAAGCAATCCAGCCTAAAACTCTTCATCTTGTGTATTGCAAGGTTCTTGGAACCTCTATACTTAGG CACATATCCTGCAGTGATGGTTAACAAAGTTGGCGAACGTTTGCCCAAATTTTCCACAAGGCAACACTTGATGGTTAAAG GTTCCTTTGATTTCATAGGATTAAACTATTACACTTCATATTATGTAGCCAATGTTCCTTGCCAACAAGGAAACCTATCT ATGATGACAGATTCTTGCACTAGATCCACTCGTAAGATTCTAAATGAAGTTTTATTAGTTATGCTTTCCATTGTCTTACT TTTATTACATTTGCTGACTAGTGATTCATTTTGTTGAATCAGCTCTGAGAAATGGAGTTCTCATTGGTCCAAAGGTAAAT CAGTTTTAATCAGTGTTTCATGCTTAAGTACTTAATATATAATGATTCGTTTTTCTCTAATACAGAGACTTTTCATTTAG AGCCCGTTTGATACGGGTTTACTGGAGCTTAATGGAGTTTATCTAAAAGAAAATGACCTAATAAACTCGAATAAGTGTTT TTTTGTTTGCATCCAAACGGGTACTTAGTCATATATCTTCTGAATCCTGGTAGAAACTGGGTTGGTCTTCTTGCTCCATT GGATGTTGCTTAACAAATTTTAGTTTCAGAAAGAAAATTAAGAATTGAATGATTTTGCAGGCTGCCTCAGACTGGCTGTA CATCTATCCTCCAGGAATTCAGTATTTACTAGAATACACAAAGGAGAAATTCAACAATCCAACCATTTACATAACAGAAA ACGGTATGTGTATCTATAATAAATCCCCTCCATTACTTTTCCCTAAAATTAAATCGTTACCATGTCTTCATCCCTAGGTT TGGTTTAAATAAATCAAGTCCAGTTATTTATGTACAAATGACTTGTTTAAGTAGCACATGCTTGACTCCCCTTATATAAA GTCTCAGGTAGTCAGATGAGTTTTGTGTGAGAACAAAACTCTCTACAATAGCTAACTCATTAAGATGTGGACGTTTCAGC TCGAATATGACTCTCTCTTGCAAAGGTTACATGTATTCCCAACAAAAATAAATCAAGTTATTCAAATATTTGCTGCAGGA GTTGATGAGGTTAATGATGGGACTAAGTCACTTGATGATAAAGTGAGGATATACTATATTGGTCAACACCTTTTGTATCT CCAAAGGGCCATTAGGTGAGTCTCTTCAGCTTAAAATTGAACATTATAGTTTTGATATTTAGTGCTCCTCTGCTCCTCTT CTATGTACTTAACATAAACTGTTCTAACACTTGGAATTTTGAAGGAATGGTGTCAAGGTGAAGGGATACTTTACATGGTC ATTTCTGGACAATTTTGAGTGGACTAGTGGGTACACTGTTCGCTTTGGATTGGTGTATGTTGATTTCAAGAATGGCCTAA AAAGATATCATAAGAGATCAGCTTTGTGGTTCAAAATATTTCTCCATCAATGAACTGGTCCTTAGTATTGAACAAAATTC ATGGAAAAGAGATGCATCAAGTGCTCCATTCTTGATTGCAGTTGTATTTCATTATAGAACGAGATGCTTTGTTGGTCTAT ATGATATTGACCTAGAATAAGGCTTTGTTGTTGTCTCTGGATATGGCATATATTCCTTGATTCCATTATGGACTTTCAGT AAAAAATGTTTTAAGTGACACTCATTTTGTTAAATTGTGGCGGTATGTATATGCCATAAATATAAGTAGTCATTTGCCTA GAATGCTACTACCACAGGTGCAATAATTGGTTTTGTGGTCATTTTTACTTAAATGCTGGTATTGTATGCTAGAAATTACA TAAAACATTGCTGGGATTCTATGACAGCAACAATAATGCCACAAAATACATCAACTATTGTATTATCAATTATGCTTAAC TTTTAACTTTTACAAGCAAT
CDS sequence (LotjaGi3g1v0106300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGTTTAAGGCGCTTCTTCTTGGGGCTGTTTCCATTGCCCTCTTTGAATCAGTTGCTTCTCTTAACTACAGCAGTTT CCCTGCAGGTTTTGTGTTTGGAACTGCATCTTCAGCTTACCAGTATGAAGGTGCTGCATTTGAGGGTGGCAAGGGCCCAA GCATATGGGACACCTTCACTCATAAGTACCCAGATCGAATAGCAGACCACAGTAATGGCGATGTTGCTACTGATTCATAT CATCGATACAAGGAAGACGTAGGCATGATGAAGGACATCGGTTTTCAAGCTTACAGATTTTCCATTTCTTGGCCCCGAAT ACTACCTAAAGGAAACTTAAATGGAGGAGTTAACCAAGAAGGCATCACATATTACAACAATCTCATAAACGAACTACTAT CTAATGGACTACAACCCTACATAACTCTATTTCATTGGGATCTACCTCAAGCTCTTGAAGATGAATATGGTGGTTTTCTT CATCCCAATATTGTGCAAGATTTTGCACATTATGCAGAACTATGCTTCAAGGAATTTGGTGACAGGGTGAAGCACTGGAT CACTTTAAATGAGCCACTAATTTATAGCCAAATGGGTTATGCAAGTGGTGCTGCATTCCCACCAGAAAGGTGCTCCTTGT GGGTCTCCCCAAATTGCACTGCTGGTGATTCGGCCACTGAGCCTTACCTGGTTGCACACCACCAGATTCTTGCTCATGCT GCAGCAGTGAAAATATACAGGGACAAGTACCAGATTTCTCAGAAGGGTCAAATTGGGATAACACTGAATGGTTTCTGGTT TGAGCCACTGTCCAAATCAAAAGCTGACAAAGATGCAGCCTCTAGAGCCATTGCTTTTACAAATGATTGGTTCTTGGAAC CTCTATACTTAGGCACATATCCTGCAGTGATGGTTAACAAAGTTGGCGAACGTTTGCCCAAATTTTCCACAAGGCAACAC TTGATGGTTAAAGGTTCCTTTGATTTCATAGGATTAAACTATTACACTTCATATTATGTAGCCAATGTTCCTTGCCAACA AGGAAACCTATCTATGATGACAGATTCTTGCACTAGATCCACTCCTCTGAGAAATGGAGTTCTCATTGGTCCAAAGGCTG CCTCAGACTGGCTGTACATCTATCCTCCAGGAATTCAGTATTTACTAGAATACACAAAGGAGAAATTCAACAATCCAACC ATTTACATAACAGAAAACGGAGTTGATGAGGTTAATGATGGGACTAAGTCACTTGATGATAAAGTGAGGATATACTATAT TGGTCAACACCTTTTGTATCTCCAAAGGGCCATTAGGAATGGTGTCAAGGTGAAGGGATACTTTACATGGTCATTTCTGG ACAATTTTGAGTGGACTAGTGGGTACACTGTTCGCTTTGGATTGGTGTATGTTGATTTCAAGAATGGCCTAAAAAGATAT CATAAGAGATCAGCTTTGTGGTTCAAAATATTTCTCCATCAATGA
Protein sequence (LotjaGi3g1v0106300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWFKALLLGAVSIALFESVASLNYSSFPAGFVFGTASSAYQYEGAAFEGGKGPSIWDTFTHKYPDRIADHSNGDVATDSY HRYKEDVGMMKDIGFQAYRFSISWPRILPKGNLNGGVNQEGITYYNNLINELLSNGLQPYITLFHWDLPQALEDEYGGFL HPNIVQDFAHYAELCFKEFGDRVKHWITLNEPLIYSQMGYASGAAFPPERCSLWVSPNCTAGDSATEPYLVAHHQILAHA AAVKIYRDKYQISQKGQIGITLNGFWFEPLSKSKADKDAASRAIAFTNDWFLEPLYLGTYPAVMVNKVGERLPKFSTRQH LMVKGSFDFIGLNYYTSYYVANVPCQQGNLSMMTDSCTRSTPLRNGVLIGPKAASDWLYIYPPGIQYLLEYTKEKFNNPT IYITENGVDEVNDGTKSLDDKVRIYYIGQHLLYLQRAIRNGVKVKGYFTWSFLDNFEWTSGYTVRFGLVYVDFKNGLKRY HKRSALWFKIFLHQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| Gene3D | 11 | 494 | 484 | 2.3E-216 | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| SUPERFAMILY | 18 | 489 | 472 | 5.66E-187 | ||
| PANTHER | 18 | 493 | 476 | 1.0E-244 | ||
| PANTHER | 18 | 493 | 476 | 1.0E-244 | – | |
| Phobius | 22 | 494 | 473 | - | – | |
| Pfam | 25 | 491 | 467 | 1.3E-163 | ||
| ProSitePatterns | 31 | 45 | 15 | - | ||
| PRINTS | 326 | 340 | 15 | 4.0E-24 | ||
| PRINTS | 401 | 409 | 9 | 4.0E-24 | ||
| PRINTS | 420 | 431 | 12 | 4.0E-24 | ||
| PRINTS | 441 | 458 | 18 | 4.0E-24 | ||
| PRINTS | 465 | 477 | 13 | 4.0E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0106300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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