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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0111700 |
| Transcript ID | LotjaGi3g1v0111700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutaredoxin family protein; TAIR: AT5G13810.1 Glutaredoxin family protein; Swiss-Prot: sp|Q9FLE8|Y5986_ARATH Uncharacterized protein At5g39865; TrEMBL-Plants: tr|G7IYV7|G7IYV7_MEDTR Glutaredoxin (GRX) family protein; Found in the gene: LotjaGi3g1v0111700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13783694..13785922) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCTTCTTTTGTCTCTGTACTAATCCTTTCCCATTCTTGTCTCTTTTTCAAAGCTAACTACAAAACCAACAGAAAAAG CCACCTTCTTGTTCAACCCAACACACAACACACAACAACAAAATCTCTCCACAAATACAACTAAGCCAACAAAAAAATAA ACCACCGCAAGTTTCACCTCCTCCGCCGCACCGGAGTTCATAACCACCGTCAGCCACCGCGTCTTTCACAAGGTGAGAAA GAACAAACCATAGAGCTCGATCTCGATTATCAATTTCGCAAGTAAAATTCGTGGAAGAAACCCTAGAAAAGATTGAAACT CTTGGATTCTTTGTGAACAGAGTCAACACCAGAGGTTGAAATCTTCAAAGATGTCGTTCCCGTTCTTCAACCGTTCGAAC ACGGTTCACTCGTCGGCGGCAGCGGCGGAACCGTCGCGGAAGCCCTACGACCATCTTCTGGACCGGTCCGGTTCGCTGAG CCGATTCTACGGTTCGGTGGAATCGGTGAAGTCTGCAGGAAGCTCGATCCGTGGAAGGATGGTGAAGAAGCTCTGCAACC TGTTTGAGTCGCCGAGTTCGAAACCATCGGAACCGAAGAAGGTGGAACCGCTGCCTTGTTCGAAATTGGGCTCGGATTCT TCTTGCACGCTGTTCCGGTTGGCTGGTGCCGAGGACCGAATTGTGGTGTATTTGACGAGCCTGCGCGGGATTCGGAGGAC CTATGAGGATTGTAGCGCGGTGAGGATGATCCTGAAGGGGTTTAGGGTTTGGGTTGACGAACGCGACGTGTCGATGGATT GTGCTTATCGAAAGGAATTGCAGGTAGCCTTTAATTTAACTTACATTCTATTTTGATTTTTGATCAAGGTTTTGTATTGT GAATATGATTGTATTTGTAGTTAAGTCACATTTTTTGATATTGTGGAAATTGGTAGATGAATGTCTTATAGCTTGTTTGA ATACGAGCTTATTTGAGCTTATCTGTTAGGAAATGTGATAATCTCGAATGAGTGCTCCTTGATTTTTATCCGAACGGGCG GATAGTAGAAGCCACGAACTTTGATGTTGTGGCCTCAACTTCAATTTAAGACCATGATTTTAATTATGAAGTTAGTAAAA TGTATCATTTGGATTTTGTGTCTTGTTTAAGTTTATGTACCAAATGCTATTGCAGAGTGTGATGGGGGAGCAGAACGTGG CGCTGCCTCAGGTGTTTGTGAGGGGCAAGTACATTGGTGGTGCTGAGGTGATTAAGCATCTCTTTGAAAGTGGTGAGTTG AGGAGGGTTCTTGAAGGGTTCCCCAAGGTGAAGCCTGGGTTTGTTTGCGAGGGTTGCGGGGACGCGAGGTTCGTGCCTTG TGAGAATTGCAGTGGGAGTAGGAAGGTGTTTGATGAGGATGAAGGGTTGTTGAAGAGGTGCTTGGAGTGCAACGAGAATG GACTCGTAAGGTGTCCCGGTTGCTGTTCCTGAAGGCTTTCATGGGGATCATGAAGCGCGTGGGTCGGGGTAGGGTTCGGC TGAGGATTCAGAGCACTCTTTGAATTATGGTTGGATTTGAGGTGATGATGGTGTTTTGCGACTTGAACTGCGTTTTGTTT TTGTTCAAGAGCGTGCCTTTTTAAGGTTTCAAAACACCCTTTGAAATTATGGGTTGGATTTGAGGTGATGATGGTGTTTT TGCGCCTTGAACAGGGTTTTGTTTTGTTCAAGAGCGTGCCTTTTAATGCATAACTCTGCTAATGAGAATGTGTATATGTA TCAATGTATGTAAATACATAGTGATGTGTAACAGTGTAAGCAGTTGCAAATATTGGTCATTGTAGTATATGATGACAATG GGGATGCTTAAATCCCTTTTTCTATTATCTAATCTAATGTTGTGTTTCCAATTTCTTTTTGTACAACATCGAATTGTATT TGATAGCACATGTATACTTGTATAGTGATCACATGACAAGAAGTGAAAGATTTAGATGTCCTATTTCCGTGGTATTTTTA GCATATTTTTTAGCATTCAGAAGCTTCCCAAATTAATTAATGGTGAGTGTGATGTGATGGCATTTTGATTTACCCTGCTC TTGTTTGTCCAATTGATACAAGCATGAAGTTCAATTTTAACAGAATGTCCGGGTAAGCTTAACTATGGAATAATAGTGGG CTTTAAGCCCTCTACAATAGCAAAAAAATAAACTATGGAATAATAGTTTCGCATTTTCTTAATTATCTG
CDS sequence (LotjaGi3g1v0111700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTTCCCGTTCTTCAACCGTTCGAACACGGTTCACTCGTCGGCGGCAGCGGCGGAACCGTCGCGGAAGCCCTACGA CCATCTTCTGGACCGGTCCGGTTCGCTGAGCCGATTCTACGGTTCGGTGGAATCGGTGAAGTCTGCAGGAAGCTCGATCC GTGGAAGGATGGTGAAGAAGCTCTGCAACCTGTTTGAGTCGCCGAGTTCGAAACCATCGGAACCGAAGAAGGTGGAACCG CTGCCTTGTTCGAAATTGGGCTCGGATTCTTCTTGCACGCTGTTCCGGTTGGCTGGTGCCGAGGACCGAATTGTGGTGTA TTTGACGAGCCTGCGCGGGATTCGGAGGACCTATGAGGATTGTAGCGCGGTGAGGATGATCCTGAAGGGGTTTAGGGTTT GGGTTGACGAACGCGACGTGTCGATGGATTGTGCTTATCGAAAGGAATTGCAGAGTGTGATGGGGGAGCAGAACGTGGCG CTGCCTCAGGTGTTTGTGAGGGGCAAGTACATTGGTGGTGCTGAGGTGATTAAGCATCTCTTTGAAAGTGGTGAGTTGAG GAGGGTTCTTGAAGGGTTCCCCAAGGTGAAGCCTGGGTTTGTTTGCGAGGGTTGCGGGGACGCGAGGTTCGTGCCTTGTG AGAATTGCAGTGGGAGTAGGAAGGTGTTTGATGAGGATGAAGGGTTGTTGAAGAGGTGCTTGGAGTGCAACGAGAATGGA CTCGTAAGGTGTCCCGGTTGCTGTTCCTGA
Protein sequence (LotjaGi3g1v0111700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFPFFNRSNTVHSSAAAAEPSRKPYDHLLDRSGSLSRFYGSVESVKSAGSSIRGRMVKKLCNLFESPSSKPSEPKKVEP LPCSKLGSDSSCTLFRLAGAEDRIVVYLTSLRGIRRTYEDCSAVRMILKGFRVWVDERDVSMDCAYRKELQSVMGEQNVA LPQVFVRGKYIGGAEVIKHLFESGELRRVLEGFPKVKPGFVCEGCGDARFVPCENCSGSRKVFDEDEGLLKRCLECNENG LVRCPGCCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 17 | 17 | - | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| PANTHER | 9 | 248 | 240 | 3.1E-104 | – | |
| PANTHER | 9 | 248 | 240 | 3.1E-104 | – | |
| ProSiteProfiles | 92 | 197 | 106 | 16.852 | ||
| SUPERFAMILY | 100 | 191 | 92 | 1.33E-21 | ||
| Gene3D | 102 | 194 | 93 | 9.2E-20 | ||
| CDD | 103 | 244 | 142 | 3.05165E-72 | – | |
| Pfam | 106 | 171 | 66 | 5.8E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Protein disulfide oxidoreductase activity | Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds. | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi3g1v0111700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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