Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0112700 |
| Transcript ID | LotjaGi3g1v0112700.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|B7FJY0|B7FJY0_MEDTR Annexin; Found in the gene: LotjaGi3g1v0112700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13891791..13894067) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTACCCTTATTGCTCCCAGTAACCATTCCCCAGTTGAGGATGCAGAAGCTATCCGAAACGCTTTCAAAGGTTACAT TATTTATTTGGCTTATTTCTTATAAATTTGTTTCATTTCAATTACGTGTTATGCTATACCCTCCTATGAATCTTTCTCCA AATCTTATAGTACAGAAAGTAAATTTTGAAGTTCTACTTTTATGATAATTGATCAACATGTTGACATATATGTTATCTTT TATGCTAAGTTCTGAAATCGATCGTAGTACTTAATAGTTTTCAACTTTGAAGGATGGGGAGCTGATGACAAGGCCATAAT AGCAATACTGGGTCATAGAAATGTTTATCAGAGGCAGGAAATCAGAAAAGCTTATGAGGAGCTTTTCCAAGAGGATCTCA TCAAGCGCCTTGAATCTGAGATCTCTGGTGACTTTGAGGTACCATTAATCATGATTTTACCAGTTAATTTCATATATTTT TTTGTAGAATCTCATATGTATGAAATAATGGGATCTCTCTGTATATATAAATCAGAGAGCTATGTTCCGGTGGATGTTGG AACCTGCAGACCGTGATGCTGTTTTGGCCAATGTAGCAATCAGGAATGGCAACAAAGACTACCATGCGGTTGCTGAAATT GCTTGTGTCCTATCAGCTGAGGAACTCTTGGCGGTGAGGCGTGCCTATCACAACCGCTACAAGCGTTCCTTGGAAGAAGA TGTGGCTGCTCATACCACTGGCCTTCATCGCCAGGTAAGTCATTCTTTATGATCATTGAATAAAGTTCATTGCTGAAATT TTTTAGGTGTTAAAATAGTCTATGTAATATAGGGCTTTAAATTGCAGTCCCAATTTCGACCGCATTGTGGAATTGAGGGC AGATAATATTTACAATATTATCTAAAGGAAGACTATCTAAATCTAAGATTGATAAGAATATGACACAATTTGATCATATA GTCAATTCCATGTGAAAAGACCTTATGATATGTTTGCGTATCTGTTAGCATTAGTGCAAACAGACATCACGTACACAAAA GTGAATGAAACTCTTCTTATAGATTAGGATGAAAGTCTTTTCATGTTGCAGTTAACTAGTATCCAAACACACACTTGATG AACTAATGGTTTGAGTATGCTTGATTTTGTGCAGCTTTTGGTTGGATTGGTGACCTCATTTAGGTATGAGGGTGATGAGA TCAATGCAAAATTGGCACAAACTGAAGCTAACATTCTTCATGAAGCTGTCCAGGAGAAGAAAGGAATCTATGAAGAAGTC ATCAGGATCCTTACCACCAGGAGCAAGACACAACTTGTGGCAACTTTCAACCGCTACAAAGATGAGCATGGCATCTCCAT CAGTAAGGTACCAAACGAAAGAGCCTTTTCCCTTTTCTCTGATTTTCCTTGTTCCTAAAAAACATTGTATTTTTAATTTA TGATATTTGATCCAAAATAATTGAAAAGAGAGGATATATTAAACTTCTTTTATATCATATCTGCAGAAATTGTTGGATGA AACATCTGATGACTTCCAGAAGACAATGCACACAGCTATTCGTTGCATCAATGACCATAAGAAATACTATGAGAAGGTCA GATTCTCTCTTTCAGCAAGTGTGAAACAACATTTAGAAAAGTGTAATGTTATTTGCAATCTAGAAAAATTACATTTTCAT GAAAGCATCTTAATTTACTCCAGTCTTCTAAACTTTAACTGAATGCAACTCAAATGGAATGTTTTTTTCTTTCTTTCTAT GATCCATATAATCTTTACAAACTTTTTTGTTTTTGTTGGATTATTGCATCCCGTTCCTCACATTGTGAATACTCAAATCC ACCTTATAACATGTTTGGAAAATCATTCTACTCCCACATTAGTACATAATTGATATAAATTTTGAGAAGCTGCTCCTTGT AGCTTCTAAGAAAAAAAATCTATTCTGGCTCATTAGAATCAAAACCAAACACACTTATTCTTAATATTTAAAATTTAACT CAACAATTACAATGTTCTCCATGATAGAATCCAACATAATTGCTTACAATGAAAATTGTCTATTCAAATATAGGTTCTGC GCAATGCGATCAAGAAATTTGGAACTGATGAGGATGGACTGAGCCGTGTGATCGTGACAAGGGCTGAGAAGGATCTGAGG GAGATTCAAGAACTCTACTACAAGAGAAACAGTGTTCACCTTGAAGATGCAATCTCCAAGGAAATCTCAGGGGACTACAA GAAGTTCATCCTCACTGTGTTGGGAAAACAAGACTAA
CDS sequence (LotjaGi3g1v0112700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACCCTTATTGCTCCCAGTAACCATTCCCCAGTTGAGGATGCAGAAGCTATCCGAAACGCTTTCAAAGGATGGGG AGCTGATGACAAGGCCATAATAGCAATACTGGGTCATAGAAATGTTTATCAGAGGCAGGAAATCAGAAAAGCTTATGAGG AGCTTTTCCAAGAGGATCTCATCAAGCGCCTTGAATCTGAGATCTCTGGTGACTTTGAGAGAGCTATGTTCCGGTGGATG TTGGAACCTGCAGACCGTGATGCTGTTTTGGCCAATGTAGCAATCAGGAATGGCAACAAAGACTACCATGCGGTTGCTGA AATTGCTTGTGTCCTATCAGCTGAGGAACTCTTGGCGGTGAGGCGTGCCTATCACAACCGCTACAAGCGTTCCTTGGAAG AAGATGGTGATGAGATCAATGCAAAATTGGCACAAACTGAAGCTAACATTCTTCATGAAGCTGTCCAGGAGAAGAAAGGA ATCTATGAAGAAGTCATCAGGATCCTTACCACCAGGAGCAAGACACAACTTGTGGCAACTTTCAACCGCTACAAAGATGA GCATGGCATCTCCATCAGTAAGAAATTGTTGGATGAAACATCTGATGACTTCCAGAAGACAATGCACACAGCTATTCGTT GCATCAATGACCATAAGAAATACTATGAGAAGGTTCTGCGCAATGCGATCAAGAAATTTGGAACTGATGAGGATGGACTG AGCCGTGTGATCGTGACAAGGGCTGAGAAGGATCTGAGGGAGATTCAAGAACTCTACTACAAGAGAAACAGTGTTCACCT TGAAGATGCAATCTCCAAGGAAATCTCAGGGGACTACAAGAAGTTCATCCTCACTGTGTTGGGAAAACAAGACTAA
Protein sequence (LotjaGi3g1v0112700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLIAPSNHSPVEDAEAIRNAFKGWGADDKAIIAILGHRNVYQRQEIRKAYEELFQEDLIKRLESEISGDFERAMFRWM LEPADRDAVLANVAIRNGNKDYHAVAEIACVLSAEELLAVRRAYHNRYKRSLEEDGDEINAKLAQTEANILHEAVQEKKG IYEEVIRILTTRSKTQLVATFNRYKDEHGISISKKLLDETSDDFQKTMHTAIRCINDHKKYYEKVLRNAIKKFGTDEDGL SRVIVTRAEKDLREIQELYYKRNSVHLEDAISKEISGDYKKFILTVLGKQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 135 | 135 | 2.2E-169 | – | |
| PANTHER | 1 | 135 | 135 | 2.2E-169 | – | |
| Gene3D | 2 | 81 | 80 | 4.6E-24 | ||
| SUPERFAMILY | 3 | 289 | 287 | 2.49E-89 | ||
| ProSiteProfiles | 10 | 81 | 72 | 23.185 | – | |
| Pfam | 15 | 76 | 62 | 2.7E-20 | ||
| PRINTS | 24 | 46 | 23 | 1.7E-12 | ||
| SMART | 27 | 79 | 53 | 2.5E-17 | ||
| PRINTS | 64 | 80 | 17 | 1.7E-12 | ||
| Gene3D | 82 | 138 | 57 | 1.7E-10 | ||
| Pfam | 88 | 135 | 48 | 5.2E-5 | ||
| SMART | 99 | 145 | 47 | 0.18 | ||
| Coils | 129 | 149 | 21 | - | – | |
| PANTHER | 135 | 291 | 157 | 2.2E-169 | – | |
| PANTHER | 135 | 291 | 157 | 2.2E-169 | – | |
| Gene3D | 141 | 216 | 76 | 3.3E-17 | ||
| ProSiteProfiles | 142 | 213 | 72 | 18.577 | – | |
| Pfam | 148 | 209 | 62 | 4.0E-12 | ||
| SMART | 162 | 211 | 50 | 0.014 | ||
| ProSiteProfiles | 217 | 288 | 72 | 20.172 | – | |
| Gene3D | 219 | 289 | 71 | 8.7E-24 | ||
| Pfam | 224 | 285 | 62 | 5.5E-16 | ||
| SMART | 234 | 286 | 53 | 1.8E-13 | ||
| ProSitePatterns | 234 | 286 | 53 | - | ||
| PRINTS | 274 | 287 | 14 | 1.7E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Calcium-dependent phospholipid binding | Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium. |
Expression pattern of LotjaGi3g1v0112700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…