Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0116800 |
| Transcript ID | LotjaGi3g1v0116800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Molybdate transporter 1-like protein; TAIR: AT2G25680.1 molybdate transporter 1; Swiss-Prot: sp|Q9SL95|MOT1_ARATH Molybdate transporter 1; TrEMBL-Plants: tr|A0A072VDZ3|A0A072VDZ3_MEDTR Sulfate transporter-like protein; Found in the gene: LotjaGi3g1v0116800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14319413..14321556) extracted from Lotus japonicus Gifu genome v1.2.
TTTACCTTCCTAACACTGATTTTACAACACCTATAAATAAACAACCAATTGCTAATCAGTAAACACCAATTCATATTAAC TCTTTTCTGAATTGAGACAAAAAACTACTTTTTTACTGTATTTGTTTGTTCCAAACCAAACAGTGTTCCTTCCATGGCAA ACCAAAACCCTCCTTCAACCCCAACCTCAGATGTTGAAGCTCAGAAAACCACTCCTTCTCAAACAAACCCTCCACCCAAA AGATTCACAGTCAAAACTGTGCTGCAGAATGTGAAAACCAACTTGGTTTTCCATTCAAAATGGGCTGAACTAAATGGTGC CATGGGTGACCTTGGCACCTTCATACCTATAGTGCTAGCATTGACTCTATCCAAGAACCTCAACCTTGGCACCACATTAA TCTTCACAGGTATTCCAAAATTTCTCAAATCAATTTTAGAAATCAAAATGCTTATAAAAAAAAGAAATTAGAAATCAAAA TAATCTTTATGATCACTTAAAATATTCAACTTTTTGTTATGTGTGTGGTGTCTGTAATTGGGTTTGTGATGTTTCAAAAG ACTGAAATTGTTGCATAATTTAAAATCATGAGTACTAACAGATTCAACTTTTTGTTATGTATGTGGTGGTGTCTGAATAG GTATCTACAATATTTTTACTGGTATGATTTATGGGGTCCCCATGCCTGTCCAGCCAATGAAGTCTATTGCTGCTGAGGCC TTATCGGACTCCGGCTTTGGCGTGCCGGAGATTATGACCGCCGGAATCTTAACCGGGGCTGTGTTGTTTTTTCTGGGTAT CACTGGGTTGATGCAGCTGGTGTACAAGTTGATTCCTCTATCTGTTGTTAGGGGAATCCAACTGGCACAGGGGTTGTCTT TTGCTATAACTGCTGTTAAATATGTGAGGAAGATTCAGGATATCCCAAAGTCTAAATCTTTGGGACCAAGGCATTGGTTT GGATTGGATGGGTTGGTTTTGGCTATAGTTTGTGCCTGTTTTATTGTGATTGTGAATGGGGCTGGGGAACAGAATCGTGG GTGTTGTGGTGATCCAGGTACAGAACAAACTAGAAATTGTGATTTGGATGGCCAAAGGAGTGGTGAGGGTGAGGGAGCAA GGAATAGGACTATTAGAGACAGAGTTAGAAAGATTGTGTTTTCACTTCCTTCTGCTTTTTTAGTCTTTGTGTTGGGTGTT ATTTTGGCTTTTATTAGAAGGCCTAAAGTGGTACATGAAATTGAATTTGGACCCTCTTCCATGGAAGTGGTGAAATTCTC TAGGCATGCTTGGAAGAAAGGTTTTATCAAGGGAACAATTCCTCAGCTTCCATTGTCAATTTTGAACTCTGTGATTGCTG TTTGCAAGTTGTCATCAGATCTGTTCCCAGAAAAAGAATTCTCAGTAACTTCCATATCAGTGACTGTTGGTTTGATGAAC TTGGTTGGTTGTTGGTTTGGCGCCGTGCCGACTTGCCATGGGGCTGGGGGGCTTGCAGGGCAGTACAAGTTTGGTGGAAG GAGTGGTGGGTGTGTGGCACTTCTTGGTGCTGCTAAATTGATACTGGGTTTGGTTCTGGGAACTTCATTGGCTCACATTT TGAAGCAGTTTCCAGTGGGGATCTTAGGTGTGTTGCTTCTGTTTGCTGGAATTGAACTTGCCATGTGTGCTAGGGACATG AACACCAAGGAAGATTCCTTTGTGTGTCTTATTTGCACTGCAGTTTCACTAATGGGTTCAAGTGCTGCTCTTGGATTTCT GTGTGGAATGGTTGTGTATGTGCTCCTTAAGCTAAGGAGTTGGACAAAAGATAAGCCACTTTCTACCATTTGGACACTGA GAAGCCCTATGTAAAAAGGAAGGAAAGGAACATGTACAGTACAGGAACAAGGTATTCTGATGATTGGAATTGTATATCTA GTGCTTTTTGTGTAAATATTATGTTGGTGTATTTTTCTTTGTTGGTATTTGAAGCCAATTGAATATCTAGTGTTTTCCTT ATGCTGTAATTGTAATGAGCATAGTAAAGTAGGAACAACTTCAGTTATTGCTGGCTTTTGTTACTGGTACCTTGCGTATA TTTTAGGGTACGTAATGCATACTATCAATAGTAAGAAGTTGCTTCAGTTTTGGTTGCATTAGCC
CDS sequence (LotjaGi3g1v0116800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAACCAAAACCCTCCTTCAACCCCAACCTCAGATGTTGAAGCTCAGAAAACCACTCCTTCTCAAACAAACCCTCC ACCCAAAAGATTCACAGTCAAAACTGTGCTGCAGAATGTGAAAACCAACTTGGTTTTCCATTCAAAATGGGCTGAACTAA ATGGTGCCATGGGTGACCTTGGCACCTTCATACCTATAGTGCTAGCATTGACTCTATCCAAGAACCTCAACCTTGGCACC ACATTAATCTTCACAGGTATCTACAATATTTTTACTGGTATGATTTATGGGGTCCCCATGCCTGTCCAGCCAATGAAGTC TATTGCTGCTGAGGCCTTATCGGACTCCGGCTTTGGCGTGCCGGAGATTATGACCGCCGGAATCTTAACCGGGGCTGTGT TGTTTTTTCTGGGTATCACTGGGTTGATGCAGCTGGTGTACAAGTTGATTCCTCTATCTGTTGTTAGGGGAATCCAACTG GCACAGGGGTTGTCTTTTGCTATAACTGCTGTTAAATATGTGAGGAAGATTCAGGATATCCCAAAGTCTAAATCTTTGGG ACCAAGGCATTGGTTTGGATTGGATGGGTTGGTTTTGGCTATAGTTTGTGCCTGTTTTATTGTGATTGTGAATGGGGCTG GGGAACAGAATCGTGGGTGTTGTGGTGATCCAGGTACAGAACAAACTAGAAATTGTGATTTGGATGGCCAAAGGAGTGGT GAGGGTGAGGGAGCAAGGAATAGGACTATTAGAGACAGAGTTAGAAAGATTGTGTTTTCACTTCCTTCTGCTTTTTTAGT CTTTGTGTTGGGTGTTATTTTGGCTTTTATTAGAAGGCCTAAAGTGGTACATGAAATTGAATTTGGACCCTCTTCCATGG AAGTGGTGAAATTCTCTAGGCATGCTTGGAAGAAAGGTTTTATCAAGGGAACAATTCCTCAGCTTCCATTGTCAATTTTG AACTCTGTGATTGCTGTTTGCAAGTTGTCATCAGATCTGTTCCCAGAAAAAGAATTCTCAGTAACTTCCATATCAGTGAC TGTTGGTTTGATGAACTTGGTTGGTTGTTGGTTTGGCGCCGTGCCGACTTGCCATGGGGCTGGGGGGCTTGCAGGGCAGT ACAAGTTTGGTGGAAGGAGTGGTGGGTGTGTGGCACTTCTTGGTGCTGCTAAATTGATACTGGGTTTGGTTCTGGGAACT TCATTGGCTCACATTTTGAAGCAGTTTCCAGTGGGGATCTTAGGTGTGTTGCTTCTGTTTGCTGGAATTGAACTTGCCAT GTGTGCTAGGGACATGAACACCAAGGAAGATTCCTTTGTGTGTCTTATTTGCACTGCAGTTTCACTAATGGGTTCAAGTG CTGCTCTTGGATTTCTGTGTGGAATGGTTGTGTATGTGCTCCTTAAGCTAAGGAGTTGGACAAAAGATAAGCCACTTTCT ACCATTTGGACACTGAGAAGCCCTATGTAA
Protein sequence (LotjaGi3g1v0116800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANQNPPSTPTSDVEAQKTTPSQTNPPPKRFTVKTVLQNVKTNLVFHSKWAELNGAMGDLGTFIPIVLALTLSKNLNLGT TLIFTGIYNIFTGMIYGVPMPVQPMKSIAAEALSDSGFGVPEIMTAGILTGAVLFFLGITGLMQLVYKLIPLSVVRGIQL AQGLSFAITAVKYVRKIQDIPKSKSLGPRHWFGLDGLVLAIVCACFIVIVNGAGEQNRGCCGDPGTEQTRNCDLDGQRSG EGEGARNRTIRDRVRKIVFSLPSAFLVFVLGVILAFIRRPKVVHEIEFGPSSMEVVKFSRHAWKKGFIKGTIPQLPLSIL NSVIAVCKLSSDLFPEKEFSVTSISVTVGLMNLVGCWFGAVPTCHGAGGLAGQYKFGGRSGGCVALLGAAKLILGLVLGT SLAHILKQFPVGILGVLLLFAGIELAMCARDMNTKEDSFVCLICTAVSLMGSSAALGFLCGMVVYVLLKLRSWTKDKPLS TIWTLRSPM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | - | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 24 | 484 | 461 | 3.2E-250 | ||
| PANTHER | 24 | 484 | 461 | 3.2E-250 | ||
| Pfam | 51 | 166 | 116 | 1.5E-29 | ||
| Phobius | 53 | 72 | 20 | - | – | |
| Phobius | 73 | 78 | 6 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 79 | 98 | 20 | - | – | |
| Phobius | 99 | 117 | 19 | - | – | |
| Phobius | 118 | 137 | 20 | - | – | |
| TMHMM | 123 | 145 | 23 | - | – | |
| Phobius | 138 | 148 | 11 | - | – | |
| Phobius | 149 | 171 | 23 | - | – | |
| TMHMM | 152 | 171 | 20 | - | – | |
| Phobius | 172 | 190 | 19 | - | – | |
| TMHMM | 191 | 213 | 23 | - | – | |
| Phobius | 191 | 210 | 20 | - | – | |
| Phobius | 211 | 256 | 46 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 257 | 277 | 21 | - | – | |
| Phobius | 278 | 338 | 61 | - | – | |
| Pfam | 307 | 425 | 119 | 2.0E-33 | ||
| TMHMM | 339 | 361 | 23 | - | – | |
| Phobius | 339 | 361 | 23 | - | – | |
| Phobius | 362 | 381 | 20 | - | – | |
| TMHMM | 382 | 404 | 23 | - | – | |
| Phobius | 382 | 403 | 22 | - | – | |
| Phobius | 404 | 408 | 5 | - | – | |
| TMHMM | 409 | 426 | 18 | - | – | |
| Phobius | 409 | 427 | 19 | - | – | |
| Phobius | 428 | 438 | 11 | - | – | |
| Phobius | 439 | 468 | 30 | - | – | |
| TMHMM | 446 | 468 | 23 | - | – | |
| Phobius | 469 | 489 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Molybdate ion transmembrane transporter activity | Enables the transfer of molybdate (MoO4 2-) ions from one side of a membrane to the other. Molybdate is the bivalent anion derived from molybdic acid. | ||
| Biological process | Molybdate ion transport | The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0116800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…