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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0122100 |
| Transcript ID | LotjaGi3g1v0122100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Actin, putative; TAIR: AT3G60830.1 actin-related protein 7; Swiss-Prot: sp|Q8L4Y5|ARP7_ARATH Actin-related protein 7; TrEMBL-Plants: tr|I1L5N3|I1L5N3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14934920..14940259) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGCCGCAGTCATCGACGCCGGTTCCAGCCTCCTCAAAGCCGGTTTCGCAATTCCCGATCAAACTCCCGCAATGGT ATTCAATCAATTCCCTACTCTCTTCCAATTTTGCATAAATTGAAGTGTTAAATTTGTGCTGCACCGCAATGTGTGTCCCT AATTGTGCAAATTTTTGTTGTTTGATGGGTTTATGGTGCAGATAATTCCTACCCAGATGAAACGAATGGTTGATGATGGT TCAGTGAGTGATAATTCGTTGGCGGATGAGATTGCCGTTGATCCGATCGTGCGAGGGTACATTCGAGATTGGGATGCTGT TGAGGATTTGTTGCAATATGTTTTGTACACTGGCCTTGGGTGGGAATTGGGCAATGAAGGACAGATACTATTTACTGATC CACTTTGTACCCCAAAGGTTTTGACTTGACTTGAGGAGTTTCTGTTCAATAGTCATTTAAAATTAAATTTTAATGATTTT GAAATCCCAGTTTTGATGGGGTTTTTATCAGTTTTTTAGCTTATTTACTGCAATATGCACTTGTAAACTATTTTTGTTCT GTTTGGTTGATCATGGTTTGGGCTTAATGTCATTGCTGTAAATTAAAGCTAGTGAAAATAATCCTTTTCGGTACCATTTT TTTATTTTCTTTGTTATGATTTCTAACTAGATTTAAGTCATTTAACTATCTTTACTGGAAATAACTAGTTATTTACCCAG GTTATCCAAACAGGGTCTTAATGCATGTCTGTTCCAACATTTGCCTCATTGATTACCTAATTCTGTTATGTATTCTTTAT ACAGGCTGAAACTACTTTTCTGTATGTATATGGTATCTTCTAGGGAAAATTTATGTTTCCTGTTTATGATTTTATGACTT TATCCAATTGATTGATGGAAATGAAATTGGGGTAGCTAGTTGATAGTATTCTTTAATGTGCATTGCTATACAGATTTTCT TTAACATTTATATTGTATTGTTTTCCAGGCTAATAAAGAACAGTTAGTGCAACTATTGTTTGAAACATTCAACGTATCAG GGTTTTATGCCTCAGAACAAGCAGTGTTGTCACTATATGCTGTGGGACGTATCTCAGGCTGCACAGTTGATATTGGTTAT GGAAAAATAGGTATACTTTTTTAGAGAACCAGAATTGAAGATTTGTTTGAATTGTATGAATATGTATTACATTTAATTGA TGGTTTGTTTGATTTGCTTGCTATAGTGTATGCCAAGTTGTCTGATTAGGATGTGGATGCATGCTATCTCTGGCACATAA TCATGTGATGTTGATGTAGTTAGGGCGCCACGGGTTACGAGACATATGTTGTGTGGTCGTGTTCTCTGTATTGCAATGGA GTAATTAAATAAAAATATATTAAGTTGCTTTATCATGTCTTAGTGATACAATAAATTGCCCTATCAGCTAAGAAGAGTCA ATAAAAGAGTAAGTCCTATAATTTCATCAGATAGTAAAGACTATAACCAATTTTAGATTTGCATGGAAGGAAAGGTTAAA ATCAAGGTTGTCATCTCATCAATCATAGTCTTGGATGGAGAAGTGTTTCCTAAAAAAATGATTGAAAATATAGAGGAGAG AGCATAAAGACGAAGATAAATCATGATAGCTTAGGAAATTAGATATGGGTGATAATTACTAGTAGAACATGTAATGTAAG GTTCTTGTAGGCTTGTTGCAGGTAGAGGTATTGGAGCAGGAAATGAATACTTGTAAAATCTTTCATTTTAAATTTGACTG GTTACCTTATCTAAATGCACATTAAAAAGAGTTTAGTTCTTCCTATGGAATCAGTTTTCCGGCAAATGGATTATATAATT TTGTTATGAGTCCTAAACATTAGCTTTTCTCTATTATCCTATTCTCTCCCCAAGGGTTTCCTGTTCATTTAAAGTTAATA TACTTTAATTCCATTTTCTGGTACTTTCTAATTTTATACAATAACCAAAGCCTTTTCCCATTGGGTGAGGTATGCCTCAT GGATCATTTGATGCCATAAATATTAGTCCTGGTAATTTCTGTTTATCAAACTAATATTTACAAATACAAGAATATTATTA TGGTTATAGGTATTGTATGTGATTTAAAGTAATCTATACATGGTGGGAACTTGAAAGACTAATAATTCTTATATGGTTGC TTTAGATCTTGGCTTCAGATAAGCGTTCTGTTGTTAAACACTTAAGCTTCTACTACGTTCAGTGTGTGCTATCTAAGTAG ATGAACAGATGGCTGAGCCTTTTTCTTTCAATGTGAATTTGCTCTTGATCTTACTAGTTCTTATGTGCCTCTTGATCTTT TTTGCCTTTTGTAATTAGATATTGCTCCGGTAATTGAGGGTGCTGTCAACCACATTGCCTCGAGAAGATTTGAGTTTGGA GGTACTGATCTCACTAATTTTCTGGCACAAGAACTTGGCAAATCCAATCCGCTAGTGAATATCAGCATGTCTGATGTTGA GAAAATAAAACAGCAATACTCATGTTGCGCTGAAGATGATTTAGCTTATCAGAAGACCCAAGATTCTTGCCCTGCGGAGA CACATACCCTTCCTGATGGACAGGTCTGCCTTTTTGTTTTTCAATCTATTAGTTTTGACTTAATATGATACTTGTTCTTG ATTTTTTTGTTTGGTCCGTTCTTCCCTCAAGTTTGTTGATGTTCTACTGTAAATGTGTGAATTAACACTGGTTATGGCAG TGGGAAGGAGACAAAAATAAAAGGGATGGTGGGTTGAAATTGAAAGTCAATAAGGACTAAGGTGAGACTAAGCAGGCTTA CTTTATATTGCTCCTGATTTAAACAATGCTTATGGACAGAAGAGAGATGGTTGGCATTTGTTACCTTTGGTTGAGTCATT AACCAGTTATCCCAAAAACTTAGCTATTTGCTAAATGACACATGAATGGTTTTAAATCATATCTCTAACATGTCACAAGA GCCCATTGGGCTTGAAGCGTGTACAATGCACAAGCTCACCTACTTATGGTGAAATTCAACTTTTAATTATAATAATTGGT GTCAACAAGGATCAAACTCTAGATCACTCGGTTATAGAGACTCTGATTCCATTTCAAGAAGCAACTATCCCAAAATCTTG AGCTGTTGGGTGAATACACATGAATGGTTCTGTATTATATTTCTAACAGGTTGCACTATGTTCTAATTCCTTAGCATTGT CAAGTCTTATTTTTTTGCCTGTTCATGTGGAACTTTCTTTCAGTGTGATGTATGAACTGAATTTTCGATGACATGCTTTA CTTGTTCTCTACAAGCTTTGTCAGAAAATTTCATCTTCCAGTAGGAGGCGGTTTAGCAATTCGTTCCTCAAATGGTGTTG AAGCTAGCTACATATGTTTTCATTGAAGGAGGCTTTAGAATATAGGGTCTTAGTAATGGGCATTTATTTATCGGATGTCC CTGAAGGGACTCATTTATTTATACGTTCTTAAAATTAGATTTAGTTGACTTAAGTTATCAAAGCTTCTATTCTAGTTGGT TGAAGTCGAAAGACAATGTTGCTCATCATCATTTCACATCGAGAAGAGGAGATTATCATTGAAATGAAATAAAGACTACT TCAGGTGTAAGTCCGTTTCTTTTTTAGATAAAAGTAATTCAATATGGATGCATAATTTGTATCAGTTCGGTAGAGGCATG GAGACTTGAAGAGTTCTGATAGATTTGTCACCGTACCCATTCCAGAGGAAGATTTGATTTATGAGACTTCAAACATCAAC AGTTTTGTTTGACCAATTACAGCAAGTTATAAGTTTCCTGCATGTTTAACGATATGATCATACAGATGGTCAGAAAGGCC ATGGACCTTTAAGTTTTGATTGCCGTTCCCATGATATAATATTCTATCTTAACCTAGAGCTCTCACATTTTAAAGTTGGA TCTCTATTATTTTATGACTTGATCTAGCAATTGAACTTTATGTAGGTGATCACAATTGGAAGAGAAAGATATACTGTCGG TGAAGCTTTATTCCGTCCATCTCTATTGGGTATAGAGGCTCATGGCATTGTTGAGCAGCTTGTCCGTACTATTTCTAGTG TGTCATCTGATAATCATCGGCAACTTCTGGAGAATACCGTGGTTTGTGGTGGCACTTCTTCAATGACTGGTAAATTGTTA GTTTTGGTGAATCTAGTACAAGATTGATCTGAGTTTCTTCTTATTTGTATTTGAAGCACATTAGACCGATCTTTTGTCTA TACATTCAAATTTTTACTAAATGGAATCACAAAACTTTCTACGCAGTATAAGGGATCCTATGTTTCTTTGTTAAATGGGA GTGCAGTAGAACTACATATTGAGACAATATATTTCATATTGTCTAATCTGGATGTAAACTTACAAGGCTATTAACGTAAT TTTCTTAAACTTAGTCCTCCTTATTTGTTACAAACGATGCCCAATTTGCATATGAAGTTTTTCCTTTTTCCAATTCAATC TATATGACTTTGAAGTTAGAATATTGTGGTGATCTGTGTGGTAATGTTTGGACTTCAAAGATAATTTAATGGAGCTATAT GGCACAGGGTTCAAGTTCAACTTAGAAGCCTGGTCCAAGTGATATGAATCACATCTCAGATTCACAAAATTTACTATTCT GCTGTCAATGATTTCGCCGCATTAGTTGCATATGAAATTTGGGTCTATTCTCATTAGCAAGCAAATGCCCGTTGTGTCAT ATGTCAATTTATTCTGCATGCTCATTACAAAATGAGGGTCATCTCTCAGCAATCTGGCCTCTTTTTATGAATTTTTTGTT TTACTTGTGCCTTCTGACATGCTAATCTTGCTTCTACCTGCAGGTTTTGAAGAGAGGTTTCAGAAGGAATCTTTCCTAAG TTCATCTGCTGTTCGACCTACCCTAGTCAAGGTAATTTGCTTGTAAAGTAAATAATGTAAGACGTCTCATAGGCATTATA AATGTTAACTTGCCGACGCTACCTATCTAAATAGTTGCACAGTTTGGAGGTTAATAATTCTTGAAATCTATTGCATATCG TAATCAAATACAGGATCGAAATCTCTGTCATCCATTTTCTTCTCTGATTATAGTTCATTGTTGTCATATATTTCTCTGGA CATAAACTTTATCGTCATTCATGTTCTAATTTGTTTCTGCTTGTGGGTAATGTGCGACTTAATGCAGCCTCCAGAATACA TGCCAGAAAATTTAACTAAGTATTCTGCTTGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAACCAGCAT GTAACTAAAGGGGACTATGATGAAAATGGACCTTCCATTGTGCATAAGAAATGCTTCTGA
CDS sequence (LotjaGi3g1v0122100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCCGCAGTCATCGACGCCGGTTCCAGCCTCCTCAAAGCCGGTTTCGCAATTCCCGATCAAACTCCCGCAATGAT AATTCCTACCCAGATGAAACGAATGGTTGATGATGGTTCAGTGAGTGATAATTCGTTGGCGGATGAGATTGCCGTTGATC CGATCGTGCGAGGGTACATTCGAGATTGGGATGCTGTTGAGGATTTGTTGCAATATGTTTTGTACACTGGCCTTGGGTGG GAATTGGGCAATGAAGGACAGATACTATTTACTGATCCACTTTGTACCCCAAAGGCTAATAAAGAACAGTTAGTGCAACT ATTGTTTGAAACATTCAACGTATCAGGGTTTTATGCCTCAGAACAAGCAGTGTTGTCACTATATGCTGTGGGACGTATCT CAGGCTGCACAGTTGATATTGGTTATGGAAAAATAGAACTTGGCAAATCCAATCCGCTAGTGAATATCAGCATGTCTGAT GTTGAGAAAATAAAACAGCAATACTCATGTTGCGCTGAAGATGATTTAGCTTATCAGAAGACCCAAGATTCTTGCCCTGC GGAGACACATACCCTTCCTGATGGACAGGTGATCACAATTGGAAGAGAAAGATATACTGTCGGTGAAGCTTTATTCCGTC CATCTCTATTGGGTATAGAGGCTCATGGCATTGTTGAGCAGCTTGTCCGTACTATTTCTAGTGTGTCATCTGATAATCAT CGGCAACTTCTGGAGAATACCGTGGTTTGTGGTGGCACTTCTTCAATGACTGGTTTTGAAGAGAGGTTTCAGAAGGAATC TTTCCTAAGTTCATCTGCTGTTCGACCTACCCTAGTCAAGCCTCCAGAATACATGCCAGAAAATTTAACTAAGTATTCTG CTTGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAACCAGCATGTAACTAAAGGGGACTATGATGAAAAT GGACCTTCCATTGTGCATAAGAAATGCTTCTGA
Protein sequence (LotjaGi3g1v0122100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAAVIDAGSSLLKAGFAIPDQTPAMIIPTQMKRMVDDGSVSDNSLADEIAVDPIVRGYIRDWDAVEDLLQYVLYTGLGW ELGNEGQILFTDPLCTPKANKEQLVQLLFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGYGKIELGKSNPLVNISMSD VEKIKQQYSCCAEDDLAYQKTQDSCPAETHTLPDGQVITIGRERYTVGEALFRPSLLGIEAHGIVEQLVRTISSVSSDNH RQLLENTVVCGGTSSMTGFEERFQKESFLSSSAVRPTLVKPPEYMPENLTKYSAWVGGAILAKVVFPQNQHVTKGDYDEN GPSIVHKKCF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 330 | 330 | 6.4E-48 | ||
| SUPERFAMILY | 2 | 138 | 137 | 1.25E-29 | ||
| Pfam | 2 | 144 | 143 | 5.1E-28 | ||
| PANTHER | 3 | 146 | 144 | 9.7E-103 | ||
| PANTHER | 3 | 146 | 144 | 9.7E-103 | – | |
| CDD | 4 | 145 | 142 | 2.93283E-9 | – | |
| Gene3D | 5 | 121 | 117 | 7.2E-38 | – | |
| PRINTS | 45 | 67 | 23 | 1.2E-8 | ||
| PRINTS | 100 | 113 | 14 | 1.2E-8 | ||
| Gene3D | 122 | 145 | 24 | 7.2E-38 | – | |
| PRINTS | 125 | 144 | 20 | 1.2E-8 | ||
| SUPERFAMILY | 131 | 330 | 200 | 3.52E-41 | ||
| PANTHER | 156 | 325 | 170 | 9.7E-103 | – | |
| PANTHER | 156 | 325 | 170 | 9.7E-103 | ||
| Gene3D | 157 | 219 | 63 | 1.8E-41 | – | |
| Pfam | 161 | 330 | 170 | 1.5E-35 | ||
| Gene3D | 220 | 283 | 64 | 1.8E-41 | – | |
| Gene3D | 284 | 320 | 37 | 1.8E-41 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0122100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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