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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0125700 |
| Transcript ID | LotjaGi3g1v0125700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT1G17020.1 senescence-related gene 1; Swiss-Prot: sp|Q39224|SRG1_ARATH Protein SRG1; TrEMBL-Plants: tr|A0A1J7G5P2|A0A1J7G5P2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0125700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15376084..15384988) extracted from Lotus japonicus Gifu genome v1.2.
CTCACAAGAAGTAATCTCGGAACTTTATCTTCCTCAACTCATATGTCTCCTCGCTCATACATTTCTGCTATTATTTAGGG AGCTTTAATACTTTATCTAGTAATGGGTACAAACAAAAGCTATATTATACCAAAAAGCCTTGTTTGACATTGACTGCAAA ACCGAAGGGAGTTCAGCAATGGATGCGGTATCTGGGAGCCTGGAATCATCACTTCCAGTTCCAAGTGTTCAAGAGCTGTC ACGCCAGTGCCCTGAGAAAGTGCCACCAAGGTACCTAAGAGATGATGATCACATGATCATTACCACTTCCCCTTCTGATC CATCTCCTCGCGTACCTGTCATAGACATGTCCAAGTTGGTCAACACAGAGACACAACAACACGAGCTTCAAAATCTTCAC CTTGCATGCAAAAATTGGGGTGTTTTTCAGGTACTTCTACTACTACATACTCAAGCACCAGTTAATTACTATGAAAATCA ATGACTAACTTGTTATAAAAATCAATGTCCACCTTGTTATCTACCAAAATCGATGCTTATATAGAAATAGATCGAGATAT GTATGTTCTAACATACATGAATGCCTGAAGCTCTACCTCCATGTTGATAAATAAAGAATTGGCTTACTTTTTACTTGATT ATCTAATTTTATTTCGTGTAGATGGTAAATCATGGAGTTTCTGATGCATCCCTTAAGAACATGAAGAATCAAGTTCAATC ATTTTTTGACCTCCCTTTTGATGAGAAAAATCGATGGGCACAGAGGCCAGGAAGTCTTGAAGGTTATGGTCAAGCATTTG TGACCTCAGAGAACCAAAAGCTGGATTGGAATGACATGATCTTCCTCAAATCTCTTCCTGTTCAGAACAGAAAGTTGGAT CTGTGGCCCCAAAACCCTCCTGAGTTCAGGTATATATTAATACTAAATAGCTGAACTGAACAGCATAAAACATTTTTATC AGCTTATGTTTCAGAAACAATTTTACTTGGAATAAAATGAACTTTGTTACAAAAACTATTCCATATATGAATATGATTCC CCAAGCTGCATGTTTTAAATTGTTGTTGCGGTCGGTTGTGATTGTGGCTATGATGCGGAATTATGGACAAATGTCAGTTG ATACGGTTGCAATGCCGGTGGGACTGCAATTGTGGCTAGGGACTGCAATTTAAAACCCTCTGGTAGACTATTTGGAGGCC TTAGCAATGGTATCAAAGCATTCTAGTTGTGGTGATACTATTTCTTTTCTATGAAATATTTTACCTGTTTTCTTCCGATG GTTATTCCTTTCACAACAAGTTAATTACCATCTTGTTTTTTTTTATGCAAGAGATTCCATTACAAAATTTCTATCATAGC ATTTTCTTATGTTTTTAAGGGTTTCCTTTTGCAATTGGTTATCAGGGAAACATTAGAGAGATATTCTGAAGATATGAGGG AGGCAGCAATTTCAATTGTGAAGTTCATTACTTTGGCTTTGGGGATACAACAGACACAGATATCAGAAAGCTTCCGAGAA GGTCTATATGATGTAAGGATGAATTGCTACCCACCCTGTCCAGAGCCTGAAAGAGTTCTTGGGATTGTGCCCCATGCCGA CAATTCCGGGATCACTCTTCTGGCTGATTGTAGTGATTTTCCAGGGTTGCAGTTCCTTAAAGATGGAAAATGGGTTGGTG TCGAACCTATAGAAGGGGCCATTGTTGCAAACATCGGCCATATTATTGAGGTTTGTATTTCTGATCCCCTAGGCTTGAAA TTCAACATGAGATAGAGATTGATAACTAACTCGTGGTTAGTTTAAGTGGTACATGCTTGATTCTCTTAAGTAAAGTCTCA GGTTCGAGTCTTGTATATGAAAACAAACCCAGTGGGGAGTGCCAGGGTCGGCACCACGTTAAGTGGGCAATCGTCCCCAA GAAAAAAAAAATCCTTAATAGAAGGATATTTAAATGATGTATTTGACCCCTTAAATTTTACACTACATCATTTAGTAGTC AATACTGATTTTTGAATATATGTTAAATTCTCAACCCCTTTTTTCTGGTTTTGTCTCCGGGGAGAGCTAGTCCGACAAGG ATATGATGTTCAAGGCTCACGTAGGATTCCCTCCTGTGGACTATATCTTGTTAGATAAAAAGGAGATAGCGATTGACAAA ATCACTTAAATGGATAAAGCAATAGGATTATGGTATTATATTTGAACAAGAATTGCCATTGCATTTTTTGATTTGGAAAA TGAGTTTAAATCTTAAAATCATCAGCATGAGTTTGGTTATGCCTTCAGGTGATGAGCAATGGGATATACAAAGCGCCAGA GCACAGAGCTGTTGTGAATAAGTTGAAGGAGAGATTGTCTATAGTGACATTCTGCTATCCATGCCCATTTATTGACATTG GACCTGCTGAAGAGCTAATTGGAGAAGGAAACCTACCTGTATACAAGAAGTTGACACACGAAGGGTACTTCAGCAGCTTT TTCCAAAGGAATCTTGATGAATCGTTCATTGATAGTCTGAAAATATGACAAATGATGTTATTTGTACATCATTTTTACTG TGCTAGTCTTCCATCATCTCCTTTTTTTAATTATCACTAAAAAGTTCCTTCACGCCCTGTTAGTTTTGATATGCAAATAA CAAAATGCAAGTATGATTTATCTTATTGTTCAGTCAGGGAAAACCGAACTTGAGTGTAGGACGTTTGTTAGACTGCTGCC ATGTGGGCACTAGGGAGAAATGAAGATTATGACTATTCTATCAATGGAGAATGGACCTCATGGGCCCTTACAAATGCGCT TTATCATTGTAGTTGCGAATTATTTCACTAAGTAGATAGAGGCAGAGTCGCTTGCCACCATTACCTCGACTCAAGTGCAA AAGTTTTGTATAACCAGCTTTGAAATCCCACATTTTGTGGTTACTGACATCAAAACTCAATTTTCTGATAAGGGATTCCA TGAGCTGCTCAAGGGTCTCCACATCAAGAAGCATTTCTCTTCAATATGAGATGTTGGAAAGTACTGGCTACACGAGCTCC TTCACGTACTATATGCTTACCGCACCAACCCACACTCCTATAGGAGAATCTCCATCAAGTCAGTTTTAGAGTGAAAGCAA TCATCCCAATAGAGGTCGGTTTTGTTGTGTTATATAATTGAGATCTCAGTTTCATGGACGTAATAGTCGAAGCGGAGTTT TAAGTCAGAGTTGAAGAGGATTCAATATTCTAGTTCTGAAGGATTCGACACAAAATGGAGATTTCACCACAAAACTGCCA GGGCATTGCCCGAGCATTGGCATTTTTGCATCAAGGGTGCTCAAAACTATTTCGGTCTGTTATGATTTTTATAGCTGAAC TTGCAAGCTGTTTTAGACTCTCTAGATATTTATTTTAGGTTAAGGTGCTCACTTGAGATTCTAAAACTGAACTTACCTGT TGACTTAATAAGATGGGCATATAAATTTTTTGGATATGGCAATTATTTGGGGCAACTTGGGTATGACAATTGCTTGAGAT TTTTTTCTTAACTGATTACAAGACAAAAATATTTTTTTGACCATGCAAGATAAACTAAAACATATCAAAGTCAAATTAAC ATTGATGCAAGCATCCACTGCCACTCATTCAGTTTGTAGGATAAAATGTTTAAATTTAGGCAATGAAAACCGAAAAGGCA TGGTCTACAGTACAGGTCACTGGAGGTCCACTTAGACCCTAGCCCATTAACACAAATATGAAATTAATAAGATGACAATC ATACAAAATGAAAATCAATGCTATAACCCAAAAATAGATTTGGTCCAGAAAAACATTTACTATTTCATAGCATGAACAGG AAACAAATTCAACCACATGAATCTAACATACTAGAACATATTAAGTTTTCACTCATTTTACTTCTCCATGTGGGATACAA TAAATGTCTCAGATGCAAGATCCCTTACAGCTTTTCCCATAGCTAAAAGCCTGCCCATCCGGCTGGTTGAGAAGCTGACT TGCTCTCAGAGGCCTTTGGATTACCAAAAAGCTGAGCTTTACTCCCTTCACCAGGTCTTGGCATCTGAGGGCTTCCAGCA CGTACAGCACTGAACTTATCTGCGCCAAAACCCCATGAATCAAAGTCAGAAGCTAGTTGAGTAGGTTGCTTGTTCTGGGG ACCATTTTTTGTCCTGACAGATTTTGTAGCATTGTCAGCTGAAAGGGACTTTACTGGTCCAGGTTCCTCCGGAAAAGCTT GCCATGACTTTGGTTCTGAACTAGGAGTTTTCAATTCACTTTCTGCAGTCCCACCAATCTTCTGCCTCTGCAGCTGTAAT GCAACATATATAATCAGGCATAAAAAACACAACCTAAACAAAATTAGCAGGGTAAAAAAAATGAGACGAAAATTACAAAT ACTCATTACCTCAGATGGAGATGAGGTAATTCCAGGAGAAGTTTTTAAACCCTCTCTACTCTGTGATGGAGTCCTTGTTG CAAGTGCTTGCTTGAGATCCTGCAATTCTTGCCTTTGGGATCTGCAAATAGCAGAAAGCTTTTCATACTTTGAAGTTATT TCAGCTTTCTCCAAGTTAGCTTCCTTCAGCTGCTCTCTGAGTTTCTCCACCTCAGCCTCTAATGCTTCTTCCCTTTCAGA TTTGTTACCAAGCCCAGAGTTGAGCTTAGTGGTATCAAATTCAGCAACAAAAGTATTAAAAGCCTGGTCTTGAAAGTTAG TATTATTCTCCATATTTGACACTCGCCTCTGATTTGCATTATCTTTGTCCTGAAAAAAATTTATTTCGAAGTCCTTGGAA GATTTGGTATCTGGCTTGTGAGGTTTTCCATGTACACTGCTTTTTACAGTATGAGTTTGTGTGGTACCCCCTTTGTTAGT ATTAATTTTTTTAGGTACTTGATCATTTTCCAGATGAACTCTATCATGTTTTGATGACATATGCTGGCTAGATGGTTCAT CATATATAGGTTTACTCTTTTCCTCAGGAACAAGTGAATCATTTGCATGCTGAGTGGACCAGAAAGCACCAAGCGGCCCA CTACTTCCCCCTCCCTTAGAAGCAAGAGATGCCTGAGGTGTAGTTTTGGGTTCTACAACTGAAGGTGGAGGAGGTGGATT CCTTCGAGGCATGGGAGATGATTTGTTTGTGGATATGGATGCACCTGCCAAAATATAGCAACAAAATGAATCTCTCCTTT TGATTATACAACTCCAGTCTTCTTTTAAGAACATTTTGCCTCTAACTTGCATCAAGGGTAAGCATTTCATGAATCAAGTA TTCCAAAACCAAGAAAATAGACGTTTTATGCTAGTAAAAAACATGCATTACCTTCGTGATTGTTGGAAGAAGGCAATTCA GGTGGCCTGTCAGGTAATGACTTTTGTAAATTAGTTGGTAGCTGCTCATTAACACGAAACCAGACCTGCCACAATGGAAA TGTATACAAAGTCAGTGATTGAGTGCTCTAATCCTAGTACCTAAGAATGCTATTGTTGGATGATCTATGACTAACCTAAA TTGATGGAGATGAATGGCCAATCAAGCAAAGCGCTTGCCTGCGTGATATCTGGTCTGTCATCTGGTTTAGCTTGAAGCAT GTCTCTGATCAAGTCCGTGACATATGAACTGTATTTAGGTACATCAGGAATGCGGTAGTTTCCATTTAAAACTTGGAGCT TTGATTCCCCATCAAATGCACTTTTGAAGTAGCATATACGAAAAAGGAGACATCCAAGTGCCTGACATATTCAACCCGTA ATATGATTCATCCATTAGCAACGAAAGAGTCAGTAGAAATAGTTACAATTAAGGAGATGAGTATTAGGCATTCATGACTT ACCCATATGTCCACCTTCTCATTAATTACTTCTTTCAGGAACAGATCCCACATCTGAAAAGCACAAAAAAATGGAATTTC TATCACACATAACTATTATTATCTTTTGTAGGAACAAAATTGGGATTACAAGGTAGTAAGTCATAATAAGTGTTCGAATT TATGGATCACCACAACAGCCCTACCCCAAAGGGAATGAACCTACGTTGCCAATAATTTGGCATAGGCTCCTTCAAACACA ACCCTTGGTGCTGATCTTAATTTTATTATAAAAAAAATTCTTAACTTACCTCAGGGGCCCTGTAGGCAGGGGTTGTGTAC TTCCTGATATTGTCTTCCTCAATCCCCATTTCTTCTGGCTTCTCAAATCGTTTGTGATTGGTGGAAGTGCTTCCAAAATC ACACAACTTCCATAAACCATCTGAACCTAATAAAAGATTCTCTGCTTTCAAGTCTCTAGGAAACGAAGAGAGAAAAATTA ATTTAATAATGATTAGGATATCACCTTATACTAGTTAGAACTGTCAAAACTTTTTAATGATATCTAAGAAATAGAACTTA AAATCAGACTTGAAATCGTACAGTTTAAATGAACATTTTTATCGCATATGAATAAATTAAGATCTTAAGAAAAACAGAAC ATAATCACAGAGAATGTATCTGCACATATATAGATTATTTCACTATCAGCACATAATATGAGGGACATGGCCATGGGCAA GTGAAATGCAAATGGAAGCCGCTAACTATCTAGCACTTGCAGTTACATATGAGAAATAAAATCAGCAAACAATGATGCTG AAGCAGTCACTTATAGGTTGTTCGGGAGGGGGGTTTTGGAGGTAAGGGGAGGGTATGGCTTCTTTTTATTTTCAAATTAA GAGAATTATATAACATTTATGATAATAAATAAATGATTACCATATAATGTTTACACTGCTTTATAATTTCATAACTTTCA TTCAAAAATAGTCAACTCAAACTCTTTATTTTAAAATAAAAAGTATGTCCTCCCCTGCTCTTCCTTCCAAAAACCTCCTT CAAAACAACCTCTTAGGGAACATTTGTTTAGGGAAAATCAAATATGAATATGAAGCTCATAGTTGGTAATGATTGGCTTC ACAAAACTGTTAAAGATCTTAGAAGAATACAAAGAGAATTCATAAATTTTGACACATGAAATTTTATTGGTTAGTAATAT TACCGGTGAGCAATAGGCGGGGACTGGCAGTGCATAGCAAAAACTGCATTACATACATCTCTAAAGATTACAAAAACCTG CTTCTCATCAAAATAACCAGCTCCTCGGCTCTCCAACACATTAACAAGAGACTTCTCACAAAATTCCATTACAAGGAATG CCTCTTTTGTCCTGCCCATATCAAAGATTGTATGTGCAAGAAGTGTGACGACATTAGGATGTCCTACCAGTGACTTAATC ACAGATATCTCCTTCTTTACCAATCCAAGTGATTCTTCATCATTGCATATTATGTGCTTCAAAGCATATTGTTTAGACAT ATGTACAGCATCACGAGCTAAGTATACACAGGAGAACCCTCCTTCAGCAATGGCCTTTTGGACATTTATTTTAAGATTTC CAATATCTATCGAACGGCCTTCTAGACCAGTTGGCTCTTTATGCATGAATGGCTTAAATCTCCACATATTTTCAGGAAAA ATAGACTCGGATGCTGCATAGGTAATTAATATATAAGCCATAACTTTCTCATCATAAAAAACACAGATTCTCTAACTAAA GAGCAACATTGTTTTTAACACATTACATCAAATCATTCACACTAAGCATACGATAATGTCTATTCACATCACCCTAGCTG TATCATCTGATTCCATCCTCCATATCAATTGATCTATGTTATCTACTTAAAAACAAGAAAGTAAAAAACACTACAATAAC AACCTCACAAAGAAAATCAAAGAAAGAAAAATGAACTCTACCCAGAAAGTCAGAAACCCATTCATTCAAAACAATGGAAA CACTCAATTTCCAAGCTCTCATTCATATGTTAAAACTAAATGGTTAATGAGGGTTCCTAGCCATATAGATCATAAAGATC ATCACAATACCACTGAATTTACAAAACAACCTCACAAAGAAAATCAAAGAAAGAAAAATGAACATTACCCAGAAACCCAT TCATTCATTCATAACAATGGCAATACTCAATTTCCAAGCTCTCATATGTTAAAACTAAGTGGTTTATGAGGGTTCCTACT TCCTAGCCATATAGATCACAGATCATCAGAATACATTACCAAAAGGGGACCATATAGCATTTAAAAATAACAACTGAGCA ATCATCAACTTAACAAAGCATTTAAAAACAATCATCATTGATAAACCAAATAAAGATCCATCCAAACCGTAACGCCAGGT CATCATTAAATTTCAATCACCGCCAGTATATCAAAAACCAAAAATAAAACATAAATGGCAAGCAACACTTCATAAAAAGA AAAATAAAAAATAAAAAATAAAAAACAAGAACACGAACCCTACCTAGAAAATTTCCACCTCTATGGCTTTTCAAGATCCT CCAATCCGAAATTCAGCTCAAATCCAATAGAACACGCACTCAATCAGTCGATCTACATCGAAATCATACATCATTCCACG TTAAAGATCGAACAACTAAAATCACATCTCTTCATAATACAAATCTTAAACAACTGAAAAAATTGCAAAAATTCACAAAA CTCACGATCGAGCGATCGAGAAATTAGTCGAGAATCGGAATCGAAGCGAATCTAACAGTGCGCCATTGAAGCAAGGGATT GAGCTTGCAACTGCTGCTACTGTTGCTTCAGATTTCGCTTGCCAAGTGAAAAAAGAGAGGAAACGCGTGAAGGGTGGTAT ATGAATGGAGAGTGGATGAGTCAGATGATCTGGACCGTCCACGTTGGGGGGAATGTGGGCCCCGAGAATTGACAGTGGTG GATGTGGTGATTAGGTGAACTTGATTGCAGAGGATAAAATAAGAGTTCTGGTGAACCTGATTGTGGTTGTCGTTGGAGTG GGCCAGTGGGGTATACCTATTCGGG
CDS sequence (LotjaGi3g1v0125700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCGGTATCTGGGAGCCTGGAATCATCACTTCCAGTTCCAAGTGTTCAAGAGCTGTCACGCCAGTGCCCTGAGAA AGTGCCACCAAGGTACCTAAGAGATGATGATCACATGATCATTACCACTTCCCCTTCTGATCCATCTCCTCGCGTACCTG TCATAGACATGTCCAAGTTGGTCAACACAGAGACACAACAACACGAGCTTCAAAATCTTCACCTTGCATGCAAAAATTGG GGTGTTTTTCAGATGGTAAATCATGGAGTTTCTGATGCATCCCTTAAGAACATGAAGAATCAAGTTCAATCATTTTTTGA CCTCCCTTTTGATGAGAAAAATCGATGGGCACAGAGGCCAGGAAGTCTTGAAGGTTATGGTCAAGCATTTGTGACCTCAG AGAACCAAAAGCTGGATTGGAATGACATGATCTTCCTCAAATCTCTTCCTGTTCAGAACAGAAAGTTGGATCTGTGGCCC CAAAACCCTCCTGAGTTCAGGGAAACATTAGAGAGATATTCTGAAGATATGAGGGAGGCAGCAATTTCAATTGTGAAGTT CATTACTTTGGCTTTGGGGATACAACAGACACAGATATCAGAAAGCTTCCGAGAAGGTCTATATGATGTAAGGATGAATT GCTACCCACCCTGTCCAGAGCCTGAAAGAGTTCTTGGGATTGTGCCCCATGCCGACAATTCCGGGATCACTCTTCTGGCT GATTGTAGTGATTTTCCAGGGTTGCAGTTCCTTAAAGATGGAAAATGGGTTGGTGTCGAACCTATAGAAGGGGCCATTGT TGCAAACATCGGCCATATTATTGAGGTGATGAGCAATGGGATATACAAAGCGCCAGAGCACAGAGCTGTTGTGAATAAGT TGAAGGAGAGATTGTCTATAGTGACATTCTGCTATCCATGCCCATTTATTGACATTGGACCTGCTGAAGAGCTAATTGGA GAAGGAAACCTACCTGTATACAAGAAGTTGACACACGAAGGGTACTTCAGCAGCTTTTTCCAAAGGAATCTTGATGAATC GTTCATTGATAGTCTGAAAATATGA
Protein sequence (LotjaGi3g1v0125700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAVSGSLESSLPVPSVQELSRQCPEKVPPRYLRDDDHMIITTSPSDPSPRVPVIDMSKLVNTETQQHELQNLHLACKNW GVFQMVNHGVSDASLKNMKNQVQSFFDLPFDEKNRWAQRPGSLEGYGQAFVTSENQKLDWNDMIFLKSLPVQNRKLDLWP QNPPEFRETLERYSEDMREAAISIVKFITLALGIQQTQISESFREGLYDVRMNCYPPCPEPERVLGIVPHADNSGITLLA DCSDFPGLQFLKDGKWVGVEPIEGAIVANIGHIIEVMSNGIYKAPEHRAVVNKLKERLSIVTFCYPCPFIDIGPAEELIG EGNLPVYKKLTHEGYFSSFFQRNLDESFIDSLKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 35 | 35 | - | – | |
| PANTHER | 5 | 349 | 345 | 3.7E-162 | – | |
| PANTHER | 5 | 349 | 345 | 3.7E-162 | – | |
| Gene3D | 12 | 346 | 335 | 3.8E-97 | ||
| SUPERFAMILY | 13 | 345 | 333 | 9.61E-93 | – | |
| Pfam | 52 | 161 | 110 | 3.5E-26 | ||
| ProSiteProfiles | 206 | 306 | 101 | 12.507 | ||
| Pfam | 211 | 304 | 94 | 1.1E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0125700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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