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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0125800 |
| Transcript ID | LotjaGi3g1v0125800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Emsy N terminus domain-containing family protein; TAIR: AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; Swiss-Prot: sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3; TrEMBL-Plants: tr|G7IJ02|G7IJ02_MEDTR Emsy amine-terminus (ENT)/plant tudor-like domain protein; Found in the gene: LotjaGi3g1v0125800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15391268..15398359) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATTAGAATCTATGTGATGAATCGAAAGGAGGAAAAAAACAGCACGAGTCGCACTCATAGGCCATAACTCAGTGTC CGAGTCCAACTCGACAAATTGACGCTCTCTCACTACTCTTCTTCACACAGCGCTGCAATCTTGCGATCCACCGTCGTCTC CTTCAGCCACCACACTCCTTGTTCTTCCATTCCTTCAACTCCTTCCTCATTCGCCTTCAATTTCGGTCGAAAAAGGGTTT TTTTGGGTGTAACTTTCTTGGATCTGGCTCTGCATTCCCATTCAAACTGGCTATGGATTACGAACCCTACGATAGTAGCG GTGAGCTTCATTCTAAAATTCCCCTCAATTTTATTCGTATCTGTGGCAAAAGTTTGAAACTTTCTCGTTTTTGTTTCTTT CAATTCTAGGGTTAGGTTTTTTTTTTCCTTTTCAATTTCTTTGCCAATTTTCTCCTATTTGGCGATGTTTTTGTTCCTTT TATGATTTGATGAGGGTGTGAATTTCAATTGTCACCAAATTCAGCGTGTTTCATGCTATGGTTGTAGAATGAGTGAATGG CTTAAGAGTGTGTTTGATTATTGGGTATACTGCAAATGTGCATGTTTTATGACTTGACCTGTTTTGTTTTGTGTGATTCA ATGATGAAAGTTTAAGTCTTTTTTGTCAAAGTGTGAATTTACCTGTTAGCTATTGATTCTTCCTATGGGCATTGAAGTAG CCAAAGTTGTGTGCCTCTTGAAAATGCATTAGAAAGAAGAAAGCAGTTAACTTTTGGCTGTTTTGCATTACTTTTCCATT ACTTTTAGGGTGTGTTTGGAGCTAATTGGTGATGACCAGATCAGCTTTGTATCTCTCCCCCCCAATCCAGTTTTTTCATG ACAGAATGAAACACATGCTTTCCGACATCATCAAAAAGCATATGTTCCAAGGAGCTAATGCATATGCTCCAAGGATCAAC TTTTCGATATCTTGACTAAATCCTTGAGGGGTCCAAGGAGCTAATGCATATGTTCCAAGTTGGTCCATATGCATCAGTTT GAGGGGGAATGTTGAGATATATGTTATATGCTGTATTGTATATTTTGTTCTGTGTTTGGAAGAGTTTATTTGAGCTTATC TTATATTATAAGCACTTATGAAGTGTTTGGATAAGCTTATGAAAGTAGCTTATCACCTACCTATAAGCTCTTATTATTTG AAAATTAGCTAACAGATATCTAATTAGAACTCCTGATGCACGTAGTAAATCTGCTTAATGTATATTTGGATGATTTGCGG TCCGGTCTGACTTTATATTCTATCCATCACTTGGTGCAATGATTGCAGGAACTGATGATGATCTTCCACCAACACATCAA AATAGAATTCCCAGAGGGGCCCGTCTTGCTGGGAATGGGAGATCTGCTGTAGGTTCTATTTCATACCCCAGGATGTACGG TGAAATTGATATGGAAACTCAAATTCACCAACTCGAACAGGAAGCATACAGTTCAGTTCTACGGGCCTTTAAAGCTCAAG ATGATGCAATTACTTGGGTACATTTTGTTATTGTTTTCCCATATCATATTTTCTTAATTTGTTTGATCAGGTTTGAATGA CTGCCAAATGACTTGTATTTTCTTCAGGACAAGGAAAGTTTGATTACAGAACTAAGGAAAGAATTAAGATTATCGAATGA GGAACACAGGGAACTTCTGGGACGTGTTAACGCTGATGATGTCATACGTAGGATAAGGTCTGATAAAATTGTAAAACAGT GTTTCTTGTTGGTCTGTGGCTCTGTGCTTTAGAAGTGAGATTGTCATTAAGTTATTCTTATACACATTGTCATCTTGTTA ATTCCTTTGGAGTTGATTTTAGGGAGTGGAGACAGACAGGTGGCCATCAGCCTGGTGTGTTGAGTACTGGACAAGCTATT CATGATTCAATTCCGAGTCCCACAGTCTCTGCATCCCGTAAGAAGCAGAAGATAGCGCAATCTGTACCGTCACAATCTTT TGGTGGGCCTTCTCCATTTCACCCACAACCCGTGGCTGCACCTCACCAGCCATCTTCTTCTGTTGCAAAACGTGGAACTG TTCCTGGATCTAAGGGCAAGAAGCAGAAACCTGTACGTAAGCGTTAAACTCCGTTTACCTTGCTCTTCTTTATCTTAACT GACTTAGTTTTATCCCCTTAGCTTCTGGAAAGATTATTTTCCACTAAGGAAAAATATACCAGGAACATTATTGTATTTTT CGGTTCTCTTATTTGCAGGGCCAGGTATTACCAGGAGTATCTTCAATAAAACAACATCCTTCATCAGGACCCGGTCTTAG GAATCAAGTACCTAATAGAGTGACTTCTGGTACTGTCATGGGTGCTGAGGGAGCATCAGTTGATTCACTGATTGGTCGGA AAGTACGAACAAAATGGCCTGATGACAATAACTTCTATGAAGCAGTTATTGCGGACTACAATCCAATTGATGTACTGGCA CCCCTCCTAGTAATTTCAAATTTTTTTGTCAATTAGTTTGTAGATGACATGTTTACTTGTAACTTTTCAGGGTCGACACA ATCTGGTCTATGACATGGGGACTGCAAATGAAACATGGGAATGGGTTAATCTGTCAGAGGTATATCTGATACTGATTTCT TTGTGATATTCTTCGTAATTTGGTATGGTTTATCTGTAGGCAATAATACCATTGTAAATATTTGGAACTGGTTTAAGAAA CTTGAAAAGGTATTATGGTAATGAAGCAATAAGAAAAGTAAGAGATGTTCATGTTTTCTTTTACTTCCTTTCCCAACACT CCCTCCCCCAACTCCACACCAAAAAAATTAAGAATGGAGGGTGATAATGTTCCATATCACTTAAAATAAAAGGTTTCTGA TCTTTCTTATGAGCCCTAAAAGTGATTTTCAATGTACATGGTAGCTAAAAGTTCATTTTGGCAACAAAATAAGATTTAAC GTTAATGAATATTTTATATATTTAGAAAGGAATAACTTAACATTGCTAAAATTGTCGATAATATTGTTCAAGAGTTTTAA ATTAGTCGCATGATTTTGTAATGGTTTTCATGGGAACAGTTCACAATTTAATATCTTTACATGGGTTCCAAAGAGGTTTT CATGCCTCTGGCCCTCTTGATACTAAAGGAAACATTGGAAATCTTTTTTCTTTTCTTATAGAAAGATTATGAAATCTGTT AAGAAAATTATTATTGGTATCTTATCCACCTTTTTTAAAACTGAAAAGCCTAGCCATTTCTTTTGCATCTATCAGTCTTG GATGTGTCATTTACTACTTGCCATATCCAACATCGAATTAAGGGGAAGACTATGAGCATCAGATGTTACAATATCAAGTA AAATAGAATAACTGGCTGTGGAGCATAATTTCAGACAAACTAGAGCTTCTTCCCCATGGTCTTCCTTTGCTGTTATTGGT ACTTTTACTGAAACTTTGTCCAAAGAGGGAAGAAGCAGACATTCAAGAGAGGCAATAAGAATTGTGGAAAGACACTGTCC CAATATGAGTGCTTAGTTTTCCTAGGGACTCGCTGGGCGTAGTTTTTTTTTTTACTTGGTTTCATTTTTAGCATGTATTA TTAAACCCTTATATTTTCAACAATGAATTGGTATTTCAAACCGGCTTACTCTTCTTCTTCAGCTATTTTAATGTAGGAAT GAGTTGGCATTGTATGTGCAAGTTGATGACTGCAGTTATTGATACCATGTGAAAAGAATTATGTATTCAAATAATCCAAG TTTTTACTAGTCTTAAATTTTGGTGGTTATTTGAATTTTGATTTTCATCAGATGGAAACACTACTCTTCTTATTTGTCTC GAATCTTCAATTATATTTAGAATATATGGGTTTTCTATCTTTTTGCTATGCTTAGCACTTAGTGGTACTATATTACTTGA ACTAATTAGATAAAGTATTATCCTGCAGATCTCTCCCGAAGATATTCAGTGGGTAGGTGTGGATCCTGGAATCAATCAGC GTGGGGGTTTTGGTGCATCTGGTCCTGGGATGAATAGATCTATAGGACGTGACAGTGTTCCAGGAGCTGGAAGAGGTAGA GGAGCCACAAAGGGGCAACCCAGAAAAGATTTATTGCCATCACAGAATGGAATAGGAAAGAAGGCTCCCGATGATATACA AATACTTCACACAGAGACACTAATCAAGGAGGTAACTGAAAATAATTCAATTGGAATACTCCTTGATTGAGAATGTTTGA TCTTTCTATGCGACATATTTAATTTTTTGGTAAAATTGACAGGTGGAAAAGGTATTCAGTGCAAATCATCCTGATGCTCT TGAAATTGAGAAAGCCAAGAAAGTGTTGAAGGTAAGAGACAATTTATGTCAGCCTGGTCTTTCTTTTACTTCTAGCTAGC TACAGATCTATTTTATTTTCTTGCAAATTGTGTTTGTACAGATAATCAATATCAATAATGAATTATATGCAGGATCATGA GCAAGCTCTTATGGATGCAATTGCAAAACTTGCAGATCTTTCTGATGGTGAAAGTGGTACTTCCTCAATTTTCACACTTA AAATTGCTGTACCATCTGAGATTTGTCCAGTCACTAGTAGTGCTCATTAATACCAAGAATGCGGTGATGGTGATCGGTCC CAAATTTGATTTTTGATGTTCTTATTGTTTATACAGATGAGGCTGGTCACCATTTCTCACATGCTCAATCAATGGATCGA GATTGATGGAAGACCAAATTTGTACAATGGCCAAAGGTGGCGCTGCGGTAGCAACCTCAGAGAGAAGAGTGAACTTCTCT TGTATTATGCCATAAAATATAATTTCCTTGGCAGATGATAGCTCTAGGATTGGGTCTTGTGCATTAGTCATTTAAGTAGG ATGGCAATTATGTAGACAGGTAATAATTATTTATTGAGGTTAAAAACTGACTTAGGATCAGCTGATGCTTGTATAAAACG TATGATAGTGTGTAAAATCATGTATTTGTGTCAAATTATGGGTACACCACTCTTCCATTGAAAAAATAATAACCATAGGA ACTCAATGACTGAGCTCAGTAAATTTAATGTGGATCTTGCTATAAAATCTTGGTTATGTATTATGTCTCCAATCTTGTTA AAATCTCTATGATTCTATCAATTAATAGACTAGATGAAGTAACTATAGTGTCTGTCCAGTCCATTCCCAGCTACATCCCA TTTTAGATTCTCATTTTCTTTTGTCGTGTCCAATGTGCTGTGTATCCTATCATGACAATAGGATTTGGCTCCTACTATAA ATATAACCTTTCTAGTATTTTTTTTTTCTCTTTGCTTTTTGTCTAGAAAATCCGTCTTAAAACTACTCCTCGTTCCCTTA TTCTCAAGTGCATCTCAAGTCAAGAAGATGTTCATGCCCAAATCCTTTCGGTTCCACTCCTTGAGCCCTCTAGCTCAAAG AGATCTCTTGCTCCTCAGAGTGCAATGTTTGTTGTGACTCTTCGTCCATAGATACTCTCTCACGATTCCACTTTACTCAG CTCCTGTGAGAATTTTTTCTCTCTACTTGAGGAACTTTCTTATTATCGTATCGTCTTTGTCTTGTTCCTCCCCAACACAT TCAAATCTTTGGATCTCTGCAAACTCCTTACTCTACTCTACGTTGGCTCATTCTTGGGAACTTACTCTTTATCACACTCT TCCATGTCCATCATCTCATCCTCTTGTTCTTAGCTGTCAACTTCTCTTCTCGAAGCTAATCTCTCTGCTTTCTCTACCTA CTCGCCCATGCTAATCCAGTGAAATTATATCTTCTTTTGAAAACCACCCTTCCTTCCATCCCTCATCAGGCAAAACCTTC TTCTTTCCCCTTCTCACCAAACTCTCATTCTCCCTCAAACCTGCAGATGGGATGACAAGATCTTGTTCAGAGTTCGAGTT CATTTCCAACTCTGTTCAGAGCCAACATCTCTTCTGTGCTTCTATCCGTGGTCTTGTCATTGACAAAATTTAGTGGACAA ACCACTCCATGTATAATGTATGTCCATGTCCCTCTCATCTAGTGATTGAACTTGATTATCTAAATTATAATCTATTCAGT TGCTTCTTTGATTATGACTTAGATCCATACTTTTTCCCTCTTCCTTGTCCTGCCAGTTATCACTCACCTCTTACATCCAT ATCCCCATGCCTTTGGGCGAGACCCCCTTGTCTGTTTTTTCTTCCGTCCCTTCTTGACCATCTTTTCTCACAGTCTCTTC TTTATCCTCTCTCTTCCCTTAATCCTCCATGCCTTTCCATTTTTCCTTCATCTCATACCCTTCTGTTTCAGGTAGTCTTT TTATCCTCCTCTTTGACACCCTTTTCGTGTCTCGTTCTCTTTCTTGTCCTTGCATACTTCTTCCTTCTCCAACCCATGTC CTTCTGTTCAGTGTGTCCTCCAGCCGTCATTTATTTCTCATTTCTCATTGAACTTCGTTGCTACGATGTTCTTGGATCAA TGCTCCTTTCTTGTCTATTCTTTCTGCATCCGACCTTGTCTCTAAAGAGACATCCCTCCTTGAGCCCTTCATCTCCTCTC TGCTTCTGTTGCCACCTTCGAAGCTTGTCCCCATGGATTTCTTCTCATGAAGATTGTCAATAGCTCCAACATCAAACCCT TTGAAGATTGACACACTCTGATGGTTTAAGGAATGAAGGAACTGATGAGAACCTCCTCCGACGATCGAAGATTCAATGGA CAGTTTTGCTTCTCCCTCGGAAGAATCTGAAGATTCAAGTGAAGACCTTATGTAGTCACTATTACATCTTTCCTCTTTTT TCTTTTCTTGTATAACCTATATATTACTCCCCTTATTTAAATAAAAATATATTTTATGATATCTAATGTTGTTTATGAAT AATGTTCCATTCACACCTCTCTTTGATGTGAAGAGAGGTGGAATGAGAAGAGAGATATGAAGAAAAGAAAAAGTATGAGA GAGAAAGTATGAGATGTGATAGATGATAAGAGGAGAGAGATAGAAATAAAAAGAGGTAGAAATGAAGTATTTGAAAAAAT GAGGTGTGTATATATCATTATTGGTTATTTATTTGTTTCTCTCTAATATCCT
CDS sequence (LotjaGi3g1v0125800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTACGAACCCTACGATAGTAGCGGAACTGATGATGATCTTCCACCAACACATCAAAATAGAATTCCCAGAGGGGC CCGTCTTGCTGGGAATGGGAGATCTGCTGTAGGTTCTATTTCATACCCCAGGATGTACGGTGAAATTGATATGGAAACTC AAATTCACCAACTCGAACAGGAAGCATACAGTTCAGTTCTACGGGCCTTTAAAGCTCAAGATGATGCAATTACTTGGGAC AAGGAAAGTTTGATTACAGAACTAAGGAAAGAATTAAGATTATCGAATGAGGAACACAGGGAACTTCTGGGACGTGTTAA CGCTGATGATGTCATACGTAGGATAAGGGAGTGGAGACAGACAGGTGGCCATCAGCCTGGTGTGTTGAGTACTGGACAAG CTATTCATGATTCAATTCCGAGTCCCACAGTCTCTGCATCCCGTAAGAAGCAGAAGATAGCGCAATCTGTACCGTCACAA TCTTTTGGTGGGCCTTCTCCATTTCACCCACAACCCGTGGCTGCACCTCACCAGCCATCTTCTTCTGTTGCAAAACGTGG AACTGTTCCTGGATCTAAGGGCAAGAAGCAGAAACCTGGCCAGGTATTACCAGGAGTATCTTCAATAAAACAACATCCTT CATCAGGACCCGGTCTTAGGAATCAAGTACCTAATAGAGTGACTTCTGGTACTGTCATGGGTGCTGAGGGAGCATCAGTT GATTCACTGATTGGTCGGAAAGTACGAACAAAATGGCCTGATGACAATAACTTCTATGAAGCAGTTATTGCGGACTACAA TCCAATTGATGGTCGACACAATCTGGTCTATGACATGGGGACTGCAAATGAAACATGGGAATGGGTTAATCTGTCAGAGA TCTCTCCCGAAGATATTCAGTGGGTAGGTGTGGATCCTGGAATCAATCAGCGTGGGGGTTTTGGTGCATCTGGTCCTGGG ATGAATAGATCTATAGGACGTGACAGTGTTCCAGGAGCTGGAAGAGGTAGAGGAGCCACAAAGGGGCAACCCAGAAAAGA TTTATTGCCATCACAGAATGGAATAGGAAAGAAGGCTCCCGATGATATACAAATACTTCACACAGAGACACTAATCAAGG AGGTGGAAAAGGTATTCAGTGCAAATCATCCTGATGCTCTTGAAATTGAGAAAGCCAAGAAAGTGTTGAAGGATCATGAG CAAGCTCTTATGGATGCAATTGCAAAACTTGCAGATCTTTCTGATGGTGAAAGTGATGAGGCTGGTCACCATTTCTCACA TGCTCAATCAATGGATCGAGATTGA
Protein sequence (LotjaGi3g1v0125800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYEPYDSSGTDDDLPPTHQNRIPRGARLAGNGRSAVGSISYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQDDAITWD KESLITELRKELRLSNEEHRELLGRVNADDVIRRIREWRQTGGHQPGVLSTGQAIHDSIPSPTVSASRKKQKIAQSVPSQ SFGGPSPFHPQPVAAPHQPSSSVAKRGTVPGSKGKKQKPGQVLPGVSSIKQHPSSGPGLRNQVPNRVTSGTVMGAEGASV DSLIGRKVRTKWPDDNNFYEAVIADYNPIDGRHNLVYDMGTANETWEWVNLSEISPEDIQWVGVDPGINQRGGFGASGPG MNRSIGRDSVPGAGRGRGATKGQPRKDLLPSQNGIGKKAPDDIQILHTETLIKEVEKVFSANHPDALEIEKAKKVLKDHE QALMDAIAKLADLSDGESDEAGHHFSHAQSMDRD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 428 | 428 | 1.6E-229 | ||
| PANTHER | 1 | 428 | 428 | 1.6E-229 | – | |
| MobiDBLite | 1 | 32 | 32 | - | – | |
| Gene3D | 39 | 127 | 89 | 6.8E-16 | ||
| SUPERFAMILY | 46 | 163 | 118 | 1.7E-38 | ||
| SMART | 51 | 124 | 74 | 7.5E-36 | ||
| ProSiteProfiles | 51 | 138 | 88 | 23.785 | ||
| Pfam | 53 | 121 | 69 | 5.1E-28 | ||
| Coils | 85 | 105 | 21 | - | – | |
| MobiDBLite | 122 | 225 | 104 | - | – | |
| MobiDBLite | 124 | 166 | 43 | - | – | |
| MobiDBLite | 207 | 225 | 19 | - | – | |
| SUPERFAMILY | 242 | 282 | 41 | 9.03E-8 | – | |
| MobiDBLite | 313 | 361 | 49 | - | – | |
| Coils | 389 | 409 | 21 | - | – | |
| MobiDBLite | 414 | 434 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response to fungus | Reactions triggered in response to the presence of a fungus that act to protect the cell or organism. |
Expression pattern of LotjaGi3g1v0125800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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