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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0128800 |
| Transcript ID | LotjaGi3g1v0128800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF936 family protein; TAIR: AT2G31920.1 elongation factor 1-delta, putative (DUF936); Swiss-Prot: sp|Q9TSZ3|KCNH2_CANLF Potassium voltage-gated channel subfamily H member 2; TrEMBL-Plants: tr|K7L711|K7L711_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0128800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15842915..15850422) extracted from Lotus japonicus Gifu genome v1.2.
GTTGGATAATTTACTTTTTGGCAAAAAAATACAAATTTCAATTCTGTCTGTTACAACAGAGAGAGAAGCCATTAGAAAGA GTAAACAGAGCACAGTACAAACTACAAAGGTCTCGTTCACTGTGCTTCCTCACTACTCACTTGCACTGCCATGGCGTCTC TGACCCCTGGCGTGCTCTCAAAACTTCTCCAAAACGCCGGCAACAAGGTCACCGGCGAGCACCGCCAAGCCCTCCTCCAA GTCACAGAAATCGTCCCTCGCCTCTCCGACGACACATGGCAACCCAGCACCACCGGCGGCGGCTACTTCCTCAAACTCTC CGACTCCCTCCACGCCGCCTACGTCTCCGTCTCCGACCACGACTCCGACCTCATCCGCTCCGACAAACTCCGACTCGGCC AGTTCGTCTACGTCACTCACCTCGACTCCGACTCCGACTCCGACTCAGCTTCCCCTATCCCACTCGTTCGTGGACTCAAC CCGCTTCCGAAGCGACGACCCTGTGTTGGAAACCCCACTGACTTGGTTTCTAGCCTCGCTCTTCCTTCAACTCCCAAGCT TCATTTCAGAAAACCCAACAACAAAAACAATGGTTCAGGTTCTTCTGCTTCCGTTGTGAAGGTGAAAAAATCGTCGCCAT TGAAGGTGGAAGAAGCGAGAAGGTTGAGTTTGGATTCTGCTAGAAGGGTTTGGGATGCTGGGAAAACTTCACCTGCTGCA ACGAGTTCTAGTTCCAGATTCAAGTTCAAATCAAACCCCACTTCACCTAATGTGCGTTTTGTTCACTGTTTTTTCTTACT TTTGGAATTTCACTTTGTTTGCAAGGTGTTTGTTTTTATTCCTTTGTAACTTTGGTTTTTTATACATAGCTCAGTTGGCA ACGTAGGCCGAGTGTGCGGGAAGAGCTCTCGGGTTCGATCCCCACACAATACACTATGGGGAAGGGATGGGGAGCTTAAC TGTGACTAAATCTTGAATTTGACGGCATCCAAAGGGTGACCGGGTACCGGATGTGTATATAAAAAACTAATCTATTTATT GAAATGTCTTTTAATTAATTAATTACAACTAGTAGAGTAGTAGAGACAAATCTTGGTTTTTTTCTTATTTTCACTGTTGG GAGCAACTGGGTTGCAGTTATTTTTAGGTAAAATTTGTGGATGGAAGCACAGTTTCTGTTGAATGAGGGCCCTCACTCAC TTTCAATTTTTGGCATTTTGAAATTATTTTGTTATGTGTGTAGGACCAGGTCAACCCTGCAACTTTTTTCAAGCTTTTGG AATGGTTAATAATAGAATTATGGTGTATCTTGATGGGTCATGAATTGTAGGCCCTTCTGGTTATTGGAGGATTCTGCATG ACTGCATCCTCTGCAGTCTGCACTGTAGAAAGAACATTGATGTTATGCAAGACAAATTGTTGTTTCTTTAATGTGTGACA TTAATGATGCTTATGGATATAGATGGTGGTGCATGGTGTAGGTGATTGACAAGAAGGTGTCTCTCAAAACTGATTCTCCA CTGAAGTCTCCAACTTCAATTGTGTCGCCATTGAAGAGTAAAAATGAGAACTTGTGTCCAAAATCGACGAGCACGCCTCC ACGGAAAAGCACTGCTAAGTCACCAAGTGCTGGAACAGTTCCAGGACAGCTTGTTAAGGTGCCCCTCAATTTCAAAACAT GGTGTGATAAGTCTTCTTCGTGGGATAATCTTCCACTTCCCATGTGTAATCTTGGAAAGGTATGGACCAACTCCATCTCT CTAATAATATTTGAACTTTTGATCCATCACCTCGTGCCAGCTTTTGAACTTTGTTCTCTTCCTTTTCCAGAAAGTTATAG CACATAGGAATGTTGCCTTTTTTGCGGCTGTTCGGTCTCTTGAAGAAGCATCTGCTACAGATACTGTGGTCCAATGCTTG GGGTATTTACTTATTTATTTATATAATCATTTTGCATCCTTTTTTTTGCTCTTCCACTAGGTGTATATATATGTAGTAGA CACAATTAATCAAAAGCTTAGCATATATTGAATTAATGACAAAGAAAACATTAAAACTAGAACTTTAACTATTTAATATT ATCTTGACAGTAGATTGAAAATTACTCCATAAATAATTTTTTACAGAAATAATTTATAATTATTGAAATAGAGGAATGAT TCTGTGTATCTTTGCTGTCATCATTTGAGTCAACAGTGAAGCCAGTTTAGGAGAAATAACTTGTAAAATTTAGGGAGTGA TGTTAAGTGTCAGTCTGTGACATGTGGGGAAATTCATCCATAGTGAGACTGAGGACACCAATTGAGATTAAAAAATGTTC GGTAGATAACCAATTTGGGTAATTCGGTGTAGACACCCAAAGTAGTGTATGAGATAGAGGAAGAGAGGAGAGAAAAATGA TAGATGTGATATATGATGTAATGTGAATAGACAAACAGAGATTGAGAAGAAAATTGGGCGTATCTGTGTGCCAATACTAT TGGGGTGTTCGGATCTGGGTGCCAATATCATCATATCAGATTCCATATGAAAAATGCTTCTTTTCCTGGGCCTTAAACTC CCTCTACTAAATGAGATTCATATCCATGGCTGGCAATGCTTATGCCATTGAACCTCTAACTAGAGCTTGTGGTCTCTCTC ATTCACTGATTTTCCAATATACTCTGTTAGGTTTTTGGAGTTCTGGAAATAATGAGAAAGTTGCAACTATGGAAATGAAC CTGAACAGCTTCCTTGCAATACTATACATTTCAATTGTGTGCATGTACCCTATTTGTCTGGTAACCTATCCTCTGGCACC TTGTGTCTGTGGATTATGGTTTTACTTCTATGGCTCTTTACGAGTGCTATTTCCTCAGTAAATTCTCTCGCTGTGTAGTC GAAATAATCAATCTTATATCATTAAGTAGAATTAGGGTAACGTGTCTCATGACTATTTAATCACATCACCTAATCATTAT CACTTGCATATGTTTGGAATTGGGAGGAAATTTCTGTTTCCTATGAACATTTTTTTTTTCTTGAGGGTTAATGTATGCAG ACCTGGTCCATAATTCCATTAACTAGGGTTGGACTAATAAGTATTCACTTTCAGCATGTTTGCAGAAATCTGCCACTCTT GTCGGACACTTTCTGCCGGATTACTTGTGAAACAGTTTCTGGAGCTTCATCTGAGTTTGCAGAGTGTAACAGAAGTACTT GATTCCTTACTTGCCCCACTTCCTGAAACAAAGCCAAGCAACCACTCTACTCTACAATGTCTGATAGAAGATGCATGTAA AGTTTCCACCTGCAAAAATGCTATATCTTGGGCACAAGCTGCTGTAGGAACCAATCTGTCCAAATTCAATATATTCAGAT CACAAGCGAAAAGTGAGGTTTTGAATGGTGAGAAATGTCATTATGTTGTCATTGACAATTCTCGTGAGGAAATGAATGTT GAGGATTCCTCTCCTCAAAACAAGCAAAATCGTGCAACTCAACCAAGTAACTTGCCAACTTCAACTGTTAAAAGACTTCC TTCTTCAAAGCGGAATCTCTTGGTAGCCAAGAACAAGGATGCTGACAAGCAGGATAAATCAAAAGAAAGTGAATTAAAAG AAGTAGCATGTTTGGCAGAAAAACTACTTGCAGCTTCACGCGAATGGTTCCTGAAGTACTTGGAGGAATCTCTAGGTAAT GAATTTGGGTTGAAAAATGAAGAGAGTGCTGAAATTGCATGTCTTCTTGGACAGCTAAAAAAGGTGAATCTCTGGCTTGA TGGTTTAGTTGTTGGAGATAAAGTTGATCACAGGGCAGAGAACCTAAGGAAACGATTGTACCGGTTTTTACTTGAGCATG TTAATTCTGCAGTTGCTTCTAGTTAGTAAATATAGCTTCTAGTTAGTCTACAGGAACTAACAGAATTGACAAAATGGAGC ATACTATTCTCAACTGATATTGGTTTGAACAGCTAACAGTGGTGTTACAATGAATGCTTAGACAGCTCGTTTTGGTTTTG GTATAACCACTTAGGATCTCAGTGCTTGAATAGTCTAATCTTAGTTAGTAACCCAAGTTATGCCCTTGACTATAGAAATT TGAGCTGTATTCTGTCAACATGTATATTTTATTTACTCTAATTTTATGATAAAACTGCTTTTGGAACAACTTTTTGTTCA TTTGCTTCCTATTGGGTCTAGTTAACCTTGGATCAATTGCCCCTTTTAGAATTCCTGTACTTGTTGATTCTTGATTTCTA TTAGATGTATGCAAAGAAATTGGTTGGGGCTACATGAGAAATCAAGTTGGGGCTACCTTTAGCAAGTCTTCCCAATGTAG TGTGTGTTGGTTTCACTTGAGGCTACCTGAGAAATCTAAGGCAGAAAAAACATTTTTCTAAGGGCTCTGTTTTTCGGTTG AAAAAATGTAATGGTAACCTTAAGGTCCTAATGTTTATGGCTTAAGAACAAGAATGACGAATCATGCTAACTTCTTGGTG GATGAAGCAAGAAGCTACATGATAGAATGCCAGTCATTATCAAATCAGAAGAACAAGTGGGAAGCTAAAATTTATACATT AAGTGCTTCTAGTGTGAAGTCAAGCATTCACAGAAAGTAATTCATATTTAGTTGGTCAAAAAGTAGTTTGAATTGGATGA AGTTGATGATCTCTGAAGCTGTCTCTCATCAGTGACAGTTGGAACTGAGGTTCCCAGAGCTTTCATTCCTTTACATGACT TCATGTGTTTGTGCATTTTCTCAGGCTTGAACGACTTTCCACATTGCCTGCATCATCAGTCCTATTTAAGGTCTCATGTT TCATGATCACAATTAAAAGACATGAAACAAGTGTCTCTAAGCATATGGGCATAAAGTATGTAGCTTATTCTATTTGACAT ATTATAACTCTATTCTATTTGACATATGACACCTTCAATTTAGATGCAAAACAACTAGCTCTTCAATTATTATCATTTCT GCAGCCAAAAGTTGGTTAACATCACAATCTAGCAATCAATGTCAACTTTCATATTTTATATATTTTTTGTTGCAAGAGAA ACAATTTGACAATCTAATAATCTAGTCAGCAGAATATCTTGATTCCTTTGGCCTATTTGTTGGAAACTTTTGCTGCTTTT AGTTTCAGTACATAGTCATACTCTGATTTTGTTCATTTTTACTAGACTAACTAGTCAATTGTTGCCTCAGGGGTTTCCAT GCATCTCCATTAAGCTGAGGAGGATCAAAGATGCACTGATAAGTCCCACTCCTAATGCTACTAAATATTACTTGATCTTC AACCTGTGTTACAATATTCTGCCACCAATATGACCATAATTTTTATAGAGTTTTCCCTCTCATTACATTGTTGAAATGCA TGCTAACAATTGAAATCATACTCACGTGACATGTTCAGTCACTTACGAGCAAATTGGTCCACCAAATGGCTTGTGAGGAG TGTGGTTCATGAACTCTCCCAACTTTTTCCTGTTCTTGTTTGTTTCCCCTCCATCACAGCTTTTTCTATAAGAACAAAAG AAAAGGACAAAAAATTTGCATCAAAAGATCCAGCCAAATAGTAATCTTTTTAACTTAAAGGATAATTAATTTGAATATTC TATGCTCAATTTATGATATAATTCCTCACCTGGGTCCATACTGTTCTTTCTGCTGATGATAATTCCAAGGAGTACCAAAA CACCTGGCTGATCCTCCCAATTTGTCTCCTCTACAAATCTCAGCATGCTTTTGAGCTATGTTTTTAGCCTCCTTGGATGC AATACTGTGAGCCTGCTTCATCAGAACCACAGCTGCATCATTTGTCTCCACAGTCCCACATGTAATCAAATTGCGGAACA CGCCGGAAACTCGAGAGGAATTGACTCTACTCTTAGTGAAGGAGGATTGGTACGATGATGATGATGTAGCAGACAATGAT GAATCTGGTGTAGCAGTTTTGCTTTTGTCATCTTTGTTACCCTTCTTACTCAACAGATTGTGATACAAGGAAGGCAATGA GAAATTGTCCAACTTCCCATGGTTCTGTTCTTTCAAACTCTCTTTCCCGGTACCCAAAAGCAGCTTCTCTTCTTCAACCT TAGAAGAGTCATCATCTGTCACTGATGACCTGCCTGAGCTGAATACCAACGACGAATCCTGGCTAATTTCGGATGACACT TTCGAACCCAAGTCTAGTTGAATTCGAGGTTCTTCTTCTTGCTTCTGGTTTTGTTTTTCCTCTGCAACTTGTAGTACTTG AGGAGAATTTTTCTCAGAAAGTGTATCAGTAGCTGTAACTTTCTTTTCATCAAGTAAAGAAGTTTCTGCATCATCCAAAA AGTTGTACAATTTAATGGCCTCGTTAACATTATTAGCAAAAGATTGATAATATAGAAAATTTCCATGGATGGAAATTATG GGTAGCCATACTCAAACATTAAAGCAAATTAATAAAAGTGGGTGATTAGATTATCTCTGACTCTAAGGTACATACCAAAT AGGGTAGGGTGGATTTGTGATCCTTTGAGGACGTATTCATTATCTGAAATGGGGGTTAAGAGGTCATCATCCAACAAGTC TTGCCACACATAACCACTCTTGTACCTCCTACAGTTCAATAATTGTCAGTTGGAAATTGATTACAGAGGCACACATATAG TAAAAGGTTAAAAGAAATGAGGTGGAGAAATGGGTATGATTCAACAACCTCTTGTAGGACCAGGAAAATGCTTCAGGTAA GTCTTTTCCTCTCAATTCCCCTAGCCATCTCTTAACATCTTTTAAAGATCAAGGAAGTGTCATAATTGAGGTCAAATAAA AAAGGTCATAGATTAATAATGATGTCACATTTATGAATAGAATTATAGTCTCAATCAAGGATGAAAATCTTCACTCTCAA TTCGTGTCTCGTTTCCAGCAATAAAATTTCACCTTTTGATCATGGCAAAATTTCATCACGAGGATAGAAAATATAAGACA CTTTAAGGTGGACAAAAGATTTTCATCCCAGTATGGAATGAAAAATCTTGTCTCATTGTCTCATTTTCCTGTCCCAACAA TGAAATTTCGCATTTAGAATTGATATGGCGAAATTTGATTAGTAGGACAGAGAATAGAATGAGACACAATAAGCGAACAA AAGATTTCCGTCCCTCAGCCAGAAGCAGGGGATGATAAACTAGGAAGAAGGGAATGGAAGTATGAAACATTGGTAACTGA CTCACCTCTGAGATAAACACCATTACGAGTAAGATGAAGAACACGAATGAGATGAGGATGCTCTACACGACCACCTGGAT GACTCAAGAAGTAGATGATATGAAGCCTTCTAACCTCTCCTCCTTTGGCTTCCATGCCTCTTTTTCTTGGTTTGTTGTTG TTGTGGTATTTTCTGAGATAAACACAAACACCCTCTCAGCACAAGCATCAAACAATTATACCCTTCTTTTGAAGCACAAC AGAACACAAACAACCCCTTTTATTAACTAATTAATTTATCCACTATGATTCAAAATAATATATAATGC
CDS sequence (LotjaGi3g1v0128800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCTCTGACCCCTGGCGTGCTCTCAAAACTTCTCCAAAACGCCGGCAACAAGGTCACCGGCGAGCACCGCCAAGC CCTCCTCCAAGTCACAGAAATCGTCCCTCGCCTCTCCGACGACACATGGCAACCCAGCACCACCGGCGGCGGCTACTTCC TCAAACTCTCCGACTCCCTCCACGCCGCCTACGTCTCCGTCTCCGACCACGACTCCGACCTCATCCGCTCCGACAAACTC CGACTCGGCCAGTTCGTCTACGTCACTCACCTCGACTCCGACTCCGACTCCGACTCAGCTTCCCCTATCCCACTCGTTCG TGGACTCAACCCGCTTCCGAAGCGACGACCCTGTGTTGGAAACCCCACTGACTTGGTTTCTAGCCTCGCTCTTCCTTCAA CTCCCAAGCTTCATTTCAGAAAACCCAACAACAAAAACAATGGTTCAGGTTCTTCTGCTTCCGTTGTGAAGGTGAAAAAA TCGTCGCCATTGAAGGTGGAAGAAGCGAGAAGGTTGAGTTTGGATTCTGCTAGAAGGGTTTGGGATGCTGGGAAAACTTC ACCTGCTGCAACGAGTTCTAGTTCCAGATTCAAGTTCAAATCAAACCCCACTTCACCTAATGTGATTGACAAGAAGGTGT CTCTCAAAACTGATTCTCCACTGAAGTCTCCAACTTCAATTGTGTCGCCATTGAAGAGTAAAAATGAGAACTTGTGTCCA AAATCGACGAGCACGCCTCCACGGAAAAGCACTGCTAAGTCACCAAGTGCTGGAACAGTTCCAGGACAGCTTGTTAAGGT GCCCCTCAATTTCAAAACATGGTGTGATAAGTCTTCTTCGTGGGATAATCTTCCACTTCCCATGTGTAATCTTGGAAAGA AAGTTATAGCACATAGGAATGTTGCCTTTTTTGCGGCTGTTCGGTCTCTTGAAGAAGCATCTGCTACAGATACTGTGGTC CAATGCTTGGGCATGTTTGCAGAAATCTGCCACTCTTGTCGGACACTTTCTGCCGGATTACTTGTGAAACAGTTTCTGGA GCTTCATCTGAGTTTGCAGAGTGTAACAGAAGTACTTGATTCCTTACTTGCCCCACTTCCTGAAACAAAGCCAAGCAACC ACTCTACTCTACAATGTCTGATAGAAGATGCATGTAAAGTTTCCACCTGCAAAAATGCTATATCTTGGGCACAAGCTGCT GTAGGAACCAATCTGTCCAAATTCAATATATTCAGATCACAAGCGAAAAGTGAGGTTTTGAATGGTGAGAAATGTCATTA TGTTGTCATTGACAATTCTCGTGAGGAAATGAATGTTGAGGATTCCTCTCCTCAAAACAAGCAAAATCGTGCAACTCAAC CAAGTAACTTGCCAACTTCAACTGTTAAAAGACTTCCTTCTTCAAAGCGGAATCTCTTGGTAGCCAAGAACAAGGATGCT GACAAGCAGGATAAATCAAAAGAAAGTGAATTAAAAGAAGTAGCATGTTTGGCAGAAAAACTACTTGCAGCTTCACGCGA ATGGTTCCTGAAGTACTTGGAGGAATCTCTAGGTAATGAATTTGGGTTGAAAAATGAAGAGAGTGCTGAAATTGCATGTC TTCTTGGACAGCTAAAAAAGGTGAATCTCTGGCTTGATGGTTTAGTTGTTGGAGATAAAGTTGATCACAGGGCAGAGAAC CTAAGGAAACGATTGTACCGGTTTTTACTTGAGCATGTTAATTCTGCAGTTGCTTCTAGTTAG
Protein sequence (LotjaGi3g1v0128800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLTPGVLSKLLQNAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSDSLHAAYVSVSDHDSDLIRSDKL RLGQFVYVTHLDSDSDSDSASPIPLVRGLNPLPKRRPCVGNPTDLVSSLALPSTPKLHFRKPNNKNNGSGSSASVVKVKK SSPLKVEEARRLSLDSARRVWDAGKTSPAATSSSSRFKFKSNPTSPNVIDKKVSLKTDSPLKSPTSIVSPLKSKNENLCP KSTSTPPRKSTAKSPSAGTVPGQLVKVPLNFKTWCDKSSSWDNLPLPMCNLGKKVIAHRNVAFFAAVRSLEEASATDTVV QCLGMFAEICHSCRTLSAGLLVKQFLELHLSLQSVTEVLDSLLAPLPETKPSNHSTLQCLIEDACKVSTCKNAISWAQAA VGTNLSKFNIFRSQAKSEVLNGEKCHYVVIDNSREEMNVEDSSPQNKQNRATQPSNLPTSTVKRLPSSKRNLLVAKNKDA DKQDKSKESELKEVACLAEKLLAASREWFLKYLEESLGNEFGLKNEESAEIACLLGQLKKVNLWLDGLVVGDKVDHRAEN LRKRLYRFLLEHVNSAVASS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 579 | 579 | 1.5E-209 | ||
| PANTHER | 1 | 579 | 579 | 1.5E-209 | – | |
| Pfam | 4 | 149 | 146 | 8.1E-51 | ||
| MobiDBLite | 133 | 261 | 129 | - | – | |
| MobiDBLite | 139 | 158 | 20 | - | – | |
| Pfam | 147 | 579 | 433 | 8.7E-77 | ||
| MobiDBLite | 161 | 178 | 18 | - | – | |
| MobiDBLite | 186 | 258 | 73 | - | – | |
| MobiDBLite | 436 | 464 | 29 | - | – | |
| MobiDBLite | 442 | 464 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0128800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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