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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0132800 |
| Transcript ID | LotjaGi3g1v0132800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LEM3 (Ligand-effect modulator 3) family protein; TAIR: AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; Swiss-Prot: sp|Q9SLK2|ALIS3_ARATH ALA-interacting subunit 3; TrEMBL-Plants: tr|Q6BBR1|Q6BBR1_LOTJA Putative uncharacterized protein Lj-CDC50 like 1; Found in the gene: LotjaGi3g1v0132800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:16677473..16686165) extracted from Lotus japonicus Gifu genome v1.2.
TGGGGCTCAATCCTCACACCACCGAAAGGTTTTTTTAATTTTTTATATCTTTTCCCTTTGAAGTTTGAACAAACAAGAGG GACGAAAATTGGTGCAAATTCACACCCAAAAGTGCAATTTATATATACAAAATTCAATTAAATAAGCTATTACAAGTAAG TTTTGCTTGAATAATGTATAGTACCAAATCCCAACACATGATTTGCTTTAGCTCAGCAAGCCACCAATACAAGCCACTGT AATGAATTGCTTTGCTGAACTCCCAAACGGGACACTCACTTTCCCTCTCTAACCTCTCTCCTTCTTCCATTTCACACCAG AGTTAGAGAGAGAGAGATTTCGTCACTGAATTTTCTAGGGTTCCAATTCCCTTTTTCGATCTTCATCGTCATTGCGAATC CAAGATCGAAAAGGCTGAGTCTTTCAACAATTCCGATTCAGTGAATGGCTTCTTCGAGCGCCGCAGCTCCTGGATCCGCT GATTCCACTGCAGCACGAAGAAACACCAAACGACCCAAGTGTAATGCGCTGTGATTACTGATAGTTTTTTTGCCTTTTGA GTTCAAATTTCAGTGACCCATTTTACCTTTTTGTTTGTTTATGATGGTAATTTCTTTCCTTTTATTCTTCTGTTGAATCA AATTGAGTGCATTTTGAGAAAAGGGGTAGTGGGTTTGTTGAGGTTCATATGTGAGTAGTGTGGGTGGTGTGATGTTTTCT TTCTGTATTTAGTGCATTATAATACCTAGATATAGGTACCTGAGTTCAATTTCATGAAAATATAACATACTATTGGAATC AGGGTTGTTAATGGCAGATAGCGTAGCGTAGCGGCAAGCCCAAAAAATGCTATTATTGCGGCTACTAGCGGATAATAGCG GCAAATAGTGGACTAGCGGTGAACCCAGGGCGCTACGCTATAGCGCTATTAACAAGCCTGATTGGAATAAGTATCCACTT CATTTTTGCAAATTTTTTTCAGTTTGTATGTGTTAAAAAGCAATTGATGTGCATAATGGTTGTTTGTTGACTTAATGAAA GAGCCGCACGCGGTTGGATAATATGTGATGATTTAGCAACAATTGATTTTACTTCTGTATTTTTTTGGTACTTAGTACTG AACTGACAAACAAAGGTTCACTTTGAAAATTTAATGCCTTTTTTCAGATTCAAAGTTTACACAGCAAGAACTTCCAGCAT GCAAGCCAATTCTTACCCCTCGAGCGGTACTAACTGATACCTTTTTGAATTCGTTGATTATGATTGATTATATATGTACC TATATGCATCTTCAGGTTGTTGTATATGCGGTCATATAATTTGTACTTCTTTTCCTGCAGGTTATTTCAGCATTCTTGCT TGTCAGTGTTGTATTTGTTCCTATCGGAGTTGCTTCACTAATTGCTTCGAGAAAGGTAGGATGAGGCTAGAATGTATTGA ATTACAATTAGCTATATATAATGCTGATTGCTGACTACTACTTTCTTTTCTTGTATATATCAGGTTGTTGAAATTGTTCA TAGGTATGAATCATCGTGCTTGAAAGGCGTAGATAATAAGATAGCATACATTCAGAGTTCTGCAGATAAAACATGCAAAA TAACACTAAAAGTAAGTTTCCTTAACACCAATTTATCTATTTTAATTAACCATCATCTTTCTATTAGGTCTGTTTCCGTT GTTGATAATTAATGGAGTTCACATTGTGGTAATCGTATCTTTCTTTGTTCCTTTCTCTTATTAAAAGGTGGACAAGCACA TGAAGTCACCGATTTATGTCTACTACCAGCTTGACAACTTTTACCAGAATCATCGCCGGTATGTAATAACCCTTTTTTCT CACACGTCATGCATTCTTCTTATTTGTTTCAATATAACGTTTACAAAATGAGAGAGTGGGGTGATTTTTAAGAAACAAGG ATGTCCTGGTGTTGCCATAGACATTTCCTGATACTTCCCGGAAATTGCTGCTCTAACCTTTTTCTGTCTAGCACTATTTT AACAATCTAATGAAAGTTCATATAGCCAATCTAAAACTAATTTTTCAGTTTCCCTAAGCAGCTAACCCTAAGAATGCAAA GTTATCTAGCAGATTTCTGAGTGGCTGCTACAGCCTACAGTGAATACCACTTATACCAGATACATAGTTTATAAGTTTTA GCGCACATATATAGATGCTTAAAAAATTACTCAAATTAAGACTTATTCATCGTTAGATAAAAGTATTTATTGAATTAGAC CCAACTGTTGTCAAATATCCTCCATGACGACTCCATGGCCGAATCTCATGGCGGAGCAAGCCGCAATGGCCGATATTCCA CCATAATCTGCCATATGCCATCAGTATTTGTCAAGTATGCCTGTTTTTGGCCATCTGCCATTAACAACACTGATCCAACT GCCTTTACAAGGAGTTTTGGAATTAGAGGGACAAAAGGACTGGGACTGGAGAGAGTGATGTGAGGATGAAGAATGAGTTG AGTCAATAGATAGGTAGATAACCCTACTGATTTGGTGGCGATGAATATGTTGCCTGGAGCACTGTATCTAAGGTGCTATG CTGGAGCACTAGTTCGCGCAGTAGTCGAATTCGTATTTTAGACTGTAATTTTACCATCATACTGTAGTTCTGACAAGCTT AGGGATCCCAATCTCATGCTGGAATGCGATTTGGCGGTCTTGTGTCATAGTTATCGATCGCGCGGAATAGCGGCGCTATC GCGCCGTCGCGTCGCGTCGCGGCGGTTCCCCGCTATTCAGATCTGATCGCGTCGCGGAACGGAGTCGCGGCCGTCGCGGT GCTATTCGCGGCCAAATCGCGGCCGTCGCGGGTGGGATCGCGGGTCAAATCGCGTTCCATCGCAGTGCTCCAGGTTAAGA TGGGTCGGATCCAAGAAAAATCCCTAAATTGCCCTTGAAATTTTACAATTAGGTTAAACTTTGAGGGTACTTTTGGGATT TCCCTCTTTATAAGTGAAACGCGCGTTTCACTTTCTTCACTATTCATCTTCTTCTTTCTTCTGCGAATCTGGTCATTGTG CCACGCGACCTCCTTCAGCCACCGTCGATCAGCACCCATGGCCACCACCCGACCTCCGACAAGCACCGCCCACTTCCGGC GACCACTGTGCGGTGACTTTCAACCAATCTCCGGCGACCACTGCCCCTGTTTCCCTTGGGCCTCTGTTATGCTCTGTTTT TTGTTATCTTTATATTCCTCTATTTTTCTTTCCTTTCTTTTCCTCTTTATTTTTCCATTCTCAATCAATTCATTTTGTTA CCTTTGGTGCTGGAAGATCCTCCTATCTTCTCTATCATTTCATCAGGTTATGAATTTTAAGTTATATTTATCATTTTTTA GTTATTATATGTATATATGTATATACTATTATACTATTAATTATATAAAATTATATATGAAAAATCAGAATAGCGGCCAT CCCGCTATGCGCTATCCCGCTATCCCACTTTTGGGGTCGGCCGCTACGCGCCGCTATCCGGGATTGACTACGATCGGCAA TCTTACTCATAAAAACAGTAAGATGGTGCGATCCCCCCGCACCCCCCCTAAATAACCCCACCATATTTTGGAAGCCCTAC TCTCCTCTTCTATATTTGAAACACACAAGTTAGCCCTATTCTTATCCATCTGTGCTGTTGCTTTTCTGTCTGCCCTTCAA AAGTTGAAACTGTACGTGCTCACTGGTCTCGGCTTCTTCCTCTTGTTAGATCTTCAACCAGATTGAAAAGGGATGTGTTC TTCCTCTTGTGATCTTCAACAAGGTTGGGTGCTAGTCCTTCCTTTGTTGCTGCTGTTGGATGTTTGTCTTGCAGAAACCC ACCATCTCTGCTTCAACTCTCAACTCTGTTTTTTCGATTGGAACCATGAACTTTCAGGCTCATTTTTTTGGTTAAAAGTT AAAAGTTAGGTTGTTAATTATAAAATAGACATTTAGATAATGATAATACTATAATAGAATACACAATATATTTTTTTTCT GGTACATGGAGACTAAGGAAAAGAAAATGACAAATCAAAAGTAGGGAAAAGCTAATTAAGCTGTCAGGTACCAGAGAAAT GTAGAAAAGGAAATAGAACTGAAATGCAATTGTATGGCGTAGTTCTGGATTTCTGAGATGAACTCAGATCCAGTTTAGGG AACTGCAAGAAGAAAGAAAAGAACAGATACAAGGCAATTTCGAGAGTTCCTTTTTCTCGCAATTCCTAACTCAGTTTCTG CCTTACTTTCCTCCTCTTACTTCACACGGTTATAGCCACCCATACGTTCTCTCTCCTTCACACTCCGCTCAAATTATTTG TCCAAGTGAGGCATTCTTTGTCTGTGGAGTGAAAATGGGAATGGATGCCCTAAGTCTGCTCGCAAACGTGTTGAGGATGA GGGTTGGCTTATCATTCAAGGTTGTGGCCAATAGTTTTATTTCTCTTATGCCTTATGATTGTCTGAGCATAGAAGAAGGT TGTATTCTAGTTCCCAAGTATCATCCATCGCTCACGGGACTTCTGGAGCCTAAAAAGATCCTCTTGAGCAAGTATTTGAT TATATTCATTTTGTAGCATGATTTGCATCTTGAGAAGTGAGATGGAATCCACTGTCTCAAGTTTCATCTGGATTCATTGA TGCCTGCCTGTATTTCCATTTTTCTCCGAAAGATGCTACCAAAAGTTTTTTGATTGAATTCTATTGAGTCCCATCGCACA TGGTGTACTAGAGAGGCAGATAAGATATCAGGATGACATTGCCAAGCCTTGGCCACTAAGGCCTTGCAGCAAGGGTGCTT TTGAATCATACAATTTCTATAAAATAATAAACAATAATTATAAAACAAATATCAGAATTTTTACTTGAAATCTTGTGATA TTTGTATAAGCTTAAGTTAATTATTTTATATCTTTATTTAATGCACTTTTATATTGGTAGGATCTTACAATTTCATGTAT CTCTTACTCCTTTTTTTTTTGGTGAAAAATCTGTCTTATTCCTCTCGCTGGACTGGGCTTCTATTTCTATCTCCCTGTAT CATCTTATATTTACAGTAATGATTTCAATGTGTTTGACTGATACTTTCCTTCGTGTATTTTCTGTTTTAATATATTTATA ATAGTTGCTTTCTTGATGCATGATTGTTTATATTCTTATTATCGCGGTTATTTTCTATAATTAGGTATGTTAAAAGCCGA AGTGATCAGCAATTGAGGGATCCAAAAGAAGAGAGCTCAACAAGTGCTTGTAAGCCTGAAGATATTGCCAATGGTAGGGC AATTGTGCCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGATACATACAGCTTCTCCTATAAAAACAAGAGTTTGACAG TTAATAAGAAAGGCATCGCCTGGAAGAGTGATAGGGAGCACAAATTTGGAAAAAATGTTCTTCCTAAAAACTTCCAGAAT GGCTCCATTATAGGTGGTGCTCATCTCAATGAATCCATAGCTGTGAGTATTTACATGACCTCTTGTTTTGATGAATTAAG TTTATCTTCAGGTATTATTATGCTTCTGCACAAGGTTCAATCATGTAATTAGAGTTTATTCTGGTTAACCTTGCATGTCC TTATGTGTCAAAATCTTTTGGTTTATTTGTTGTTGCTGCTACTGTTGTTGTTTTTACAAGTGTTGTTACTACTTTTATTA GTATCTGTATTGTACATACTGTAATGATCACTGCAACACACCTCTCTGATATTAATTTTTCAATTACTTCCGACTATAAT TTTCTGTTCATTTTGTGAATAACCTCGAGTATTCTCAATTGATAGCTTCCATCCATCAAGATTTTTTGCTCACTTTTTGA AAATTTATCAAACAGTTGAGTGAGCAGGAGGATCTTATTGTCTGGATGAGAACTGCTGCCTTGCCAACGTTTAGAAAGTT GTACGGAAAGATAGAGGTGGATCTCGATGAAGGTGAGAACATAAGTGTAAAGCTTCAAAATAACTACAACACATACAGTT TTAATGGCAAGAAAAAGCTCGTACTATCAACTACTAGCTGGCTTGGTGGGAAGAATGACTTCCTTGGCATTGCTTATCTC ACCGTTGGAGGGTTGTGCTTCTTTTTGGCTTTGGCTTTTACCATTGTATATTTCGTCAAGCCAAGGTACACACTTAAAAC CTTTATTGCTTTAGATCGCAAAGTTTCCATTTGAAGCAGGGCAATAAATTGGGTAGCATGCATGGGCTTTACCTGTTTTA TTGCTTGATTGCTTACTTATTTGTTTGACCAAAAATGGTGTTGGATGCATTTATTTTTCACATAAGTTTGCATATGGTAC TTAAATACATGGTTCTGTGATACAGGTTAACTGGATTATCAGGCCTGACATTTAATTTCAACCCCATCTCCCTTTTTAAC TGAAATTAGCATTGAATTTTTTGTTCTGTTTGATGAAAATACAAATAATGTTTTTAGTGAGTTGTTTGTTAAGTCGGTGC GATTTGCGTACTTATGAAGTTCTTTCTACTTATAAGGAAAAATGGGAAAAATTATATTATTTACTGGAACTACCTAAGTT ATTTATAAAAAGGGCCCCCTTTAGTGCTATTCTAGGTATATAATTTAGAGATTAGTGATTAAAAGCTTTGATTAGAACTT GTATGTGAAAGAAGCCGCTACAGTTATGTTACACTTTATGCTTGTTTTTGTCCATCTATTTCTCTTGGTGTACACTATAC AATACAAAGTTCATAGTTGCTGGATTTTGTCAAGTAATTTAAATCCTGCTTGTCTATGTTTTTTTTTTGTAATTTTATTA AAATATAACAAATAAGTTTTTTCAGAAAAAGCAAAAATACTCGGAAAAATCTGTCACAGTTCTTTCATCGGCAGCTAATA TTAGAAACTTTTTAAAAGAATTATAAAACATCATACAATTACTTTTTGTATAATTTGAAATCAAATGGGCCTAAATTGGA TGATTGAAATTTGCTTATACTTGAACAACCACTTGAAGTCACAATGTTGAATCATTTTTTTAGTTCCTAACTTATTTTCC TGTCTGACTTTTTTAGGCAACTGGGAGATCCCTCATATTTGTCATGGAATAGGAATCCAGGAGGGCACTAGGGAAAGAAA CAAATCATGCTTGTTTGTTATTCCCAGTGTTATGAGGCATGGGTCTTCTACAGTGGAGGGTGTAGTTTTTGTATATCTAT GTTAACCAATCACTAGTGACACTTTGATTTTTAGGTGTGCCTGTTTGCAGAACACACTTTTTTTTTATTCTTATTGTGCA TCAGAATTGAAATATGCTGTATTTCCTATTGATAGATAGCGTCCAATATATATGCAAGAAGTAATTCATACAGCCTGGGA AATATAGTTGAGTACTTGAGTTCTTATTTGTTTTCTTCCTTTTGGCTTTTGCTAGACATAACCAGATAAAGATGACAACA GCAAAATTTTGATAATAGAAAGGGCTACAATAAGTGCTACAATTCATAGATTTCAGATAACTTTTTCAAATTTGGTCATT AAGACGACTCAAATAAGGATCATTAGATTTGACACCTCACTCATTAGAAATGTCACCCCACTTACGGAAATTCAGTTTCC GAAATATTTCGGAAATAAGGTTTCCGAAGCACTTTTTCACTCAAAAGTGGGGTGTTACATGTATTTTGCACTACAAATCA CGAATTAATTTCGGAATCTAAAATTCCGAAATAATTCGGAACTTGAAAATCCGAAAATTGGGGGTGTGAAATCTAATGGT TGGGGTGGCAAATCCAGCTCGCCTCAAATAAGGGTTAAAGAGTTAGGAAAAATATTGGTTCATGGTGAAGGTTCCTACCC TAGGGCTTGGGGGTTATATTGTCACCTTAACCATCTTAAGCAAGAGATTGCCACTTCCCAAACTCTCCATGCACTGGTTC TTCCAAGGAAGCATTACCCTAGCTCTCCTCCTCCATCATCACCACCATCATCATCATCATCATCATCCTCTTCCTAAAAT GGCCACTGACCCCAACAATAGGACACACCCGAGCAAGAACTCCATGAACTTTACTCTTCTCCCAGATCTCGTAATAAACT CTCCTAAGCTGTAGCATCGGCTTGGACTACAACAACCTCATTTTTCACGTCAACAGTGATACTCTGGAGGTTGAACAAGG TGATATCATTAAGGGTTCGTTAGAGACATAAGAGATGCCCTCGTAATCATGGCTGTCGCTTCTAAGTTTGAGTTGAACCC TTATAGTTTTGGCGCAGATGACACCATCCTCAACGTGGGATTCTTGCTAGGGAGTGAGGATGATTAATTTCTTTAGCGTG GAGGTGGTGTTGAAATATGCGTTACAGATGTAGTTTTGAAGGACAAGGAAGAATGAGGCACTGTTAATTCGGGAGAAGGC AATGTTGGAGAGTTGAGTGGGAGGATTTGTGTGCATTGTGAGGCACTGAAAGCAAGTTTTGTGAAACCAACTTGATGTTC ATCCGAAGTGCTTGAACATGCAGAACTGTCTAATGAATCTGGAGCTCAGAGACATGAAGATCTTTTAATTTTCTTCACTG TCTTCAAGAGATTTCATCGATTACGTGATCATAGCCACATTGATGGAACATGGTGAGCCACGTTCAAAGATTCCAACACA AAGGTCAATTTTCATCGCACGGTCTTTTAGCATTTCACCAATTATAATACTAT
CDS sequence (LotjaGi3g1v0132800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTCGAGCGCCGCAGCTCCTGGATCCGCTGATTCCACTGCAGCACGAAGAAACACCAAACGACCCAAGTATTC AAAGTTTACACAGCAAGAACTTCCAGCATGCAAGCCAATTCTTACCCCTCGAGCGGTTATTTCAGCATTCTTGCTTGTCA GTGTTGTATTTGTTCCTATCGGAGTTGCTTCACTAATTGCTTCGAGAAAGGTTGTTGAAATTGTTCATAGGTATGAATCA TCGTGCTTGAAAGGCGTAGATAATAAGATAGCATACATTCAGAGTTCTGCAGATAAAACATGCAAAATAACACTAAAAGT GGACAAGCACATGAAGTCACCGATTTATGTCTACTACCAGCTTGACAACTTTTACCAGAATCATCGCCGGTATGTTAAAA GCCGAAGTGATCAGCAATTGAGGGATCCAAAAGAAGAGAGCTCAACAAGTGCTTGTAAGCCTGAAGATATTGCCAATGGT AGGGCAATTGTGCCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGATACATACAGCTTCTCCTATAAAAACAAGAGTTT GACAGTTAATAAGAAAGGCATCGCCTGGAAGAGTGATAGGGAGCACAAATTTGGAAAAAATGTTCTTCCTAAAAACTTCC AGAATGGCTCCATTATAGGTGGTGCTCATCTCAATGAATCCATAGCTTTGAGTGAGCAGGAGGATCTTATTGTCTGGATG AGAACTGCTGCCTTGCCAACGTTTAGAAAGTTGTACGGAAAGATAGAGGTGGATCTCGATGAAGGTGAGAACATAAGTGT AAAGCTTCAAAATAACTACAACACATACAGTTTTAATGGCAAGAAAAAGCTCGTACTATCAACTACTAGCTGGCTTGGTG GGAAGAATGACTTCCTTGGCATTGCTTATCTCACCGTTGGAGGGTTGTGCTTCTTTTTGGCTTTGGCTTTTACCATTGTA TATTTCGTCAAGCCAAGGCAACTGGGAGATCCCTCATATTTGTCATGGAATAGGAATCCAGGAGGGCACTAG
Protein sequence (LotjaGi3g1v0132800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSSAAAPGSADSTAARRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFVPIGVASLIASRKVVEIVHRYES SCLKGVDNKIAYIQSSADKTCKITLKVDKHMKSPIYVYYQLDNFYQNHRRYVKSRSDQQLRDPKEESSTSACKPEDIANG RAIVPCGLIAWSLFNDTYSFSYKNKSLTVNKKGIAWKSDREHKFGKNVLPKNFQNGSIIGGAHLNESIALSEQEDLIVWM RTAALPTFRKLYGKIEVDLDEGENISVKLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALAFTIV YFVKPRQLGDPSYLSWNRNPGGH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PIRSF | 1 | 339 | 339 | 9.0E-149 | ||
| Phobius | 1 | 44 | 44 | - | – | |
| MobiDBLite | 1 | 17 | 17 | - | – | |
| PANTHER | 2 | 342 | 341 | 4.5E-187 | ||
| PANTHER | 2 | 342 | 341 | 4.5E-187 | – | |
| TMHMM | 45 | 67 | 23 | - | – | |
| Phobius | 45 | 67 | 23 | - | – | |
| Pfam | 65 | 327 | 263 | 4.2E-93 | ||
| Phobius | 68 | 300 | 233 | - | – | |
| TMHMM | 298 | 320 | 23 | - | – | |
| Phobius | 301 | 323 | 23 | - | – | |
| Phobius | 324 | 343 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0132800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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