Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0135000 |
| Transcript ID | LotjaGi3g1v0135000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Eukaryotic aspartyl protease family protein; TAIR: AT2G35615.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615; TrEMBL-Plants: tr|A0A072TIW2|A0A072TIW2_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi3g1v0135000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:17236188..17238358) extracted from Lotus japonicus Gifu genome v1.2.
CTTCAATTATGACTAATATACACACACATATATATATATATACACACCTTTCAACATCTCTTTCCTCTGCTGATCAAAAA AAAAAAAACATCTCTTTCCTCCTTAACATTGCCCGCTTTGACTTTTGCAACATGGAGGTACATGTACTTGCACTTTTTGT CATTGTGTTTATCTCACCTTTAATTGAAGCCAACCTACCTAATAACTTTAGCATTGATCTAATTCACAGAGACTCGCCTT TGTCCCCTTTCTACAACTCTTCAATGAACGAATCAGAGGTCTTTATAAATGTCGCTATGCGTTCAATTTCTCGAGCTGAA ACCTTATTTCACCTCTCAAATACAGGTGGAATTAAATCTCAAGCTATGCTTATTTCAAACAAAATTGATTACCTCATGAA ATTCACCGTAGGAAACCCACCCATAGACTCATTTGGCATTGTAGACACAGGCAGTGACCTTATTTGGATACAATGCCAAC CTTGTGAAGATTGTTACAAACAAACCACACCCATCTTTGATCCAAAGAAATCTTCCACTTACCAAACAATATCTTGTGAT AGTCATACTTGTGACTTGGTCGGCACACATGCTTGTGGAGCTTCAACCGTGTGCCGGTATGAGTTCACTTACGAGGACAA GTCCATGACTGTTGGAGAGTTGGCTCGTGATATAATTACCTTTGGTTCCTTTCGTGAAGTGATTTCTCCAAATACTATCT TCGGGTGTGGACATACCAACCTTGGGTTTGATGGACCTACGGCAACAGGATTAGTTGGTCTTGGACAAGGACCTTTGTCT TTGGTTTCGCAACTAGGTGATCGGATTAGTCACAAATTCTCATATTGCCTGTTTCACCGGTATTCAAATATCACTAGTAA GATCAAGTTTGGGTGGGAAGCAACTTTATCTAGAGATCGAATTGGAGTTGTTTCTGTCCCTTTGGTGGACAGAGCTCCAA ACACCTTTTACCACCTTAGCCTTAAAGAAATTTATGTTGGCAAGGACGCGGTGGAGACTGATAAGAGTAATTCAGGTAAT TGATAATTGGAAAAGTAATTCCTAATTTTTTTAAGATTCTTGATTTGCAAATGAACTATCCATTTTTTCTCCAATTTATT TTTTATTAGCTACATGAGATATAGTTAATTTGGTCATAATAAATTGCAATCAACTATCATTATTAACTTTGACTATATTT TCATTTTCTTAGTTGGTCCTAAGAATAGATATAGAAGCAAAGTTGTGATATACCCTTTTCAGTCAATATAAAATTGACCT CTATATAGATTAATCACTCACTTAATGGGATAATAAGATTTTTTTTGTCCTTTTCTCATCTCTAAGTTGACATTGTCTCA TTTCATCAGTTACTAAACATTAAATAGTATCAAAAGTCTATCATGGATCTGTTGTTAGACTACCCATCTCTGTAAATGCT ATATGCTTCCAATATCTAGCCCCAGACATGAAATGAGATGTTAAGATCAGACATTGACTGTAACTTTATCAAATAATCCC TTTTAAATAATGGATTAAGATCAATAATTCTGATTTGGTTTCTCATTCACTGTCTTTCAATAAAATTGCCTCATGTTAAT AAAAAAAAATGCATGGGAATAACAACTATCTATTACATAGGTTTTAAAATTACATGAAACATTTTTATTCGGGAGACACA TAAATTTTTTATTTATATATTATTTTTGTCTAAAGTATAAGATTTTTTTGTTTTTAAAATATATTTTAGTCTAGAGTTAA GTTCAATTACGAATTTGTAACTATTTTCATAATTTTTGTTGTTCTCTTTTATCACATATTTTTACAAAAACTTTCTTATT AAATATAATTTTTTTTACAGATATTATAATTGATTCGGGGACTACGTTGACTTTTCTGGAGACAAGTTTGTATGAGATTT TTGAACTTACCGTGATTGAAGCTTATGGTGATGATCGTGAACCAATAAGAAATCCACCTAAGCCATACAGATTGTGTTAT CTTGATGGGACAACGAAGGACCTCCCAGATATTTCTCTTAGCTTTTACGGAGCAAACAGAAAATTACGGCTAAAGGCATA CAATGTATTTGCAAAGTTCAGTGGTTTGTTGTGCCTTACAGTGGCCCCTATTAAAGGTTCCTCTGTCCTTGGGAACTTAG CACAAGTGAAC
CDS sequence (LotjaGi3g1v0135000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTAATATACACACACATATATATATATATACACACCTTTCAACATCTCTTTCCTCTGCTGATCAAAAAAAAAAAAA CATCTCTTTCCTCCTTAACATTGCCCGCTTTGACTTTTGCAACATGGAGGTACATGTACTTGCACTTTTTGTCATTGTGT TTATCTCACCTTTAATTGAAGCCAACCTACCTAATAACTTTAGCATTGATCTAATTCACAGAGACTCGCCTTTGTCCCCT TTCTACAACTCTTCAATGAACGAATCAGAGGTCTTTATAAATGTCGCTATGCGTTCAATTTCTCGAGCTGAAACCTTATT TCACCTCTCAAATACAGGTGGAATTAAATCTCAAGCTATGCTTATTTCAAACAAAATTGATTACCTCATGAAATTCACCG TAGGAAACCCACCCATAGACTCATTTGGCATTGTAGACACAGGCAGTGACCTTATTTGGATACAATGCCAACCTTGTGAA GATTGTTACAAACAAACCACACCCATCTTTGATCCAAAGAAATCTTCCACTTACCAAACAATATCTTGTGATAGTCATAC TTGTGACTTGGTCGGCACACATGCTTGTGGAGCTTCAACCGTGTGCCGGTATGAGTTCACTTACGAGGACAAGTCCATGA CTGTTGGAGAGTTGGCTCGTGATATAATTACCTTTGGTTCCTTTCGTGAAGTGATTTCTCCAAATACTATCTTCGGGTGT GGACATACCAACCTTGGGTTTGATGGACCTACGGCAACAGGATTAGTTGGTCTTGGACAAGGACCTTTGTCTTTGGTTTC GCAACTAGGTGATCGGATTAGTCACAAATTCTCATATTGCCTGTTTCACCGGTATTCAAATATCACTAGTAAGATCAAGT TTGGGTGGGAAGCAACTTTATCTAGAGATCGAATTGGAGTTGTTTCTGTCCCTTTGGTGGACAGAGCTCCAAACACCTTT TACCACCTTAGCCTTAAAGAAATTTATGTTGGCAAGGACGCGGTGGAGACTGATAAGAGTAATTCAGGTAATTGA
Protein sequence (LotjaGi3g1v0135000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTNIHTHIYIYTHLSTSLSSADQKKKNISFLLNIARFDFCNMEVHVLALFVIVFISPLIEANLPNNFSIDLIHRDSPLSP FYNSSMNESEVFINVAMRSISRAETLFHLSNTGGIKSQAMLISNKIDYLMKFTVGNPPIDSFGIVDTGSDLIWIQCQPCE DCYKQTTPIFDPKKSSTYQTISCDSHTCDLVGTHACGASTVCRYEFTYEDKSMTVGELARDIITFGSFREVISPNTIFGC GHTNLGFDGPTATGLVGLGQGPLSLVSQLGDRISHKFSYCLFHRYSNITSKIKFGWEATLSRDRIGVVSVPLVDRAPNTF YHLSLKEIYVGKDAVETDKSNSGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 46 | 340 | 295 | 2.7E-76 | – | |
| PANTHER | 46 | 340 | 295 | 2.7E-76 | ||
| Gene3D | 113 | 295 | 183 | 1.1E-47 | ||
| SUPERFAMILY | 123 | 340 | 218 | 9.32E-55 | ||
| Pfam | 128 | 295 | 168 | 2.8E-51 | ||
| ProSiteProfiles | 128 | 344 | 217 | 20.574 | ||
| ProSitePatterns | 143 | 154 | 12 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi3g1v0135000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…