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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001969
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 118 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.232s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0047459.1
n.a. PREDICTED: aspartic proteinase PCS1-like [Cicer arietinum] gi|502137709|ref|XP_004503158.1| chr0 15862156 15863938 -
2 domain predictions
2 GO terms
Lj0g3v0077119.1
n.a. PREDICTED: aspartic proteinase-like [Glycine max] gi|356555682|ref|XP_003546159.1| chr0 29506857 29510333 -
2 domain predictions
2 GO terms
Lj0g3v0080919.1
n.a. PREDICTED: aspartic proteinase oryzasin-1-like [Glycine max] gi|356556454|ref|XP_003546541.1| chr0 31482940 31486875 +
2 domain predictions
2 GO terms
Lj0g3v0080919.2
n.a. PREDICTED: aspartic proteinase oryzasin-1-like [Glycine max] gi|356556454|ref|XP_003546541.1| chr0 31483045 31486875 +
2 domain predictions
2 GO terms
Lj0g3v0110909.1
n.a. PREDICTED: aspartic proteinase PCS1-like [Cicer arietinum] gi|502137709|ref|XP_004503158.1| chr0 48127868 48129715 +
2 domain predictions
2 GO terms
Lj0g3v0159829.1
n.a. PREDICTED: probable aspartic protease At2g35615-like [Glycine max] gi|356546370|ref|XP_003541599.1| chr0 74948923 74950236 +
2 domain predictions
2 GO terms
Lj0g3v0188289.1
n.a. PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] gi|356502091|ref|XP_003519855.1| chr0 91957745 91958901 +
2 domain predictions
2 GO terms
Lj0g3v0247129.1
n.a. PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] gi|356502456|ref|XP_003520035.1| chr0 128075869 128077439 -
2 domain predictions
2 GO terms
Lj0g3v0254609.1
n.a. PREDICTED: aspartic proteinase-like [Cicer arietinum] gi|502117401|ref|XP_004495808.1| chr0 132202801 132206180 -
2 domain predictions
2 GO terms
Lj0g3v0256379.1
n.a. PREDICTED: probable aspartic protease At2g35615-like [Glycine max] gi|356555042|ref|XP_003545848.1| chr0 133114376 133115692 +
2 domain predictions
2 GO terms
Lj0g3v0264539.1
n.a. PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] gi|356502091|ref|XP_003519855.1| chr0 137143696 137145670 -
2 domain predictions
2 GO terms
Lj0g3v0269839.1
n.a. Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|357492401|ref|XP_003616489.1| chr0 139796955 139798271 -
2 domain predictions
2 GO terms
Lj0g3v0282749.3
n.a. PREDICTED: aspartic proteinase oryzasin-1-like [Cicer arietinum] gi|502150663|ref|XP_004508063.1| chr0 146577804 146583673 -
2 domain predictions
2 GO terms
Lj0g3v0290049.1
n.a. polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| chr0 150640340 150640996 +
2 domain predictions
2 GO terms
Lj0g3v0295819.1
n.a. PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] gi|356548395|ref|XP_003542587.1| chr0 153701291 153708027 +
2 domain predictions
2 GO terms
Lj0g3v0295819.2
n.a. PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] gi|356548395|ref|XP_003542587.1| chr0 153701291 153705547 +
2 domain predictions
2 GO terms
Lj0g3v0295819.3
n.a. PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] gi|356551638|ref|XP_003544181.1| chr0 153701291 153706952 +
2 domain predictions
2 GO terms
Lj0g3v0295819.4
n.a. PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] gi|356548395|ref|XP_003542587.1| chr0 153701291 153708027 +
2 domain predictions
2 GO terms
Lj0g3v0301649.1
n.a. n.a. chr0 156817170 156822329 +
2 domain predictions
2 GO terms
Lj0g3v0330649.1
n.a. polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| chr0 172819688 172820392 +
2 domain predictions
2 GO terms
Lj0g3v0357099.1
n.a. polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| chr0 188031667 188032783 +
2 domain predictions
2 GO terms
Lj0g3v0360319.1
n.a. PREDICTED: aspartic proteinase CDR1-like [Cicer arietinum] gi|502164878|ref|XP_004513307.1| chr0 189743268 189744539 -
2 domain predictions
2 GO terms
Lj0g3v0363109.1
n.a. Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|357492389|ref|XP_003616483.1| chr0 191519860 191521185 +
2 domain predictions
2 GO terms
Lj1g3v0715550.1
n.a. Aspartic proteinase-like protein [Medicago truncatula] gi|357517935|ref|XP_003629256.1| chr1 9369949 9376202 -
2 domain predictions
2 GO terms
Lj1g3v0715550.2
n.a. Aspartic proteinase-like protein [Medicago truncatula] gi|357517935|ref|XP_003629256.1| chr1 9371049 9372561 -
2 domain predictions
2 GO terms
Lj1g3v0715560.1
n.a. PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] gi|356502091|ref|XP_003519855.1| chr1 9377961 9381108 -
2 domain predictions
2 GO terms
Lj1g3v0811870.1
n.a. polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| chr1 10649692 10651645 +
2 domain predictions
2 GO terms
Lj1g3v1379740.1
n.a. PREDICTED: aspartic proteinase nepenthesin-1-like [Cicer arietinum] gi|502137193|ref|XP_004503002.1| chr1 16606935 16608975 -
2 domain predictions
2 GO terms
Lj1g3v4729160.1
n.a. PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max] gi|356503843|ref|XP_003520712.1| chr1 56551478 56554113 +
2 domain predictions
2 GO terms
Lj1g3v4807400.1
n.a. aspartic proteinase 2 [Glycine max] gi|351725345|ref|NP_001237345.1| chr1 57943297 57947757 +
2 domain predictions
2 GO terms
Lj1g3v5034920.1
n.a. PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cicer arietinum] gi|502113987|ref|XP_004494825.1| chr1 61581384 61583002 -
2 domain predictions
2 GO terms
Lj2g3v0743130.1
n.a. PREDICTED: lysine-specific histone demethylase 1 homolog 1-like [Glycine max] gi|356522749|ref|XP_003530008.1| chr2 11765362 11770462 -
2 domain predictions
2 GO terms
Lj2g3v0744290.1
n.a. PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] gi|356531224|ref|XP_003534178.1| chr2 11821201 11823940 -
2 domain predictions
2 GO terms
Lj2g3v1670800.1
n.a. PREDICTED: peroxidase [Glycine max] gi|356540838|ref|XP_003538891.1| chr2 25963304 25967195 +
2 domain predictions
2 GO terms
Lj2g3v2001980.1
n.a. PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cicer arietinum] gi|502160237|ref|XP_004511679.1| chr2 30130142 30131746 +
2 domain predictions
2 GO terms
Lj2g3v2543820.1
n.a. PREDICTED: aspartic proteinase PCS1-like [Cicer arietinum] gi|502096798|ref|XP_004490830.1| chr2 35178305 35178881 +
2 domain predictions
2 GO terms
Lj2g3v3085370.1
n.a. 60S ribosomal protein L18a [Medicago truncatula] gi|357494221|ref|XP_003617399.1| chr2 39696353 39698684 +
2 domain predictions
2 GO terms
Lj3g3v0937980.1
n.a. PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cicer arietinum] gi|502087695|ref|XP_004488613.1| chr3 11340341 11344277 +
2 domain predictions
2 GO terms
Lj3g3v0950730.1
n.a. PREDICTED: aspartic proteinase CDR1-like [Cicer arietinum] gi|502089285|ref|XP_004488861.1| chr3 12224698 12226388 -
2 domain predictions
2 GO terms
Lj3g3v0950820.1
n.a. PREDICTED: probable aspartic protease At2g35615-like [Glycine max] gi|356557014|ref|XP_003546813.1| chr3 12303955 12305070 +
2 domain predictions
2 GO terms
Lj3g3v1312770.1
n.a. Aspartic protease isoform 2 [Theobroma cacao] gi|508701346|gb|EOX93242.1| chr3 17001064 17005374 +
2 domain predictions
2 GO terms
Lj3g3v2061660.1
n.a. PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Cicer arietinum] gi|502148094|ref|XP_004507035.1| chr3 26536459 26538520 -
2 domain predictions
2 GO terms
Lj3g3v3701270.1
n.a. Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|357460823|ref|XP_003600693.1| chr3 44944693 44946734 +
2 domain predictions
2 GO terms
Lj4g3v0073720.1
n.a. PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max] gi|356532386|ref|XP_003534754.1| chr4 654023 656179 +
2 domain predictions
2 GO terms
Lj4g3v0135640.1
n.a. aspartic proteinase [Vigna unguiculata] gi|20800441|gb|AAB03843.2| chr4 1449237 1457762 +
2 domain predictions
2 GO terms
Lj4g3v0137730.1
n.a. aspartic acid protease [Phaseolus vulgaris] gi|223929912|gb|ACN24614.1| chr4 1478854 1494871 -
2 domain predictions
2 GO terms
Lj4g3v0772170.2
n.a. PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] gi|356565521|ref|XP_003550988.1| chr4 12349169 12354774 -
2 domain predictions
2 GO terms
Lj4g3v3095020.1
n.a. PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] gi|356531224|ref|XP_003534178.1| chr4 41076628 41078546 +
2 domain predictions
2 GO terms
Lj4g3v3116340.1
n.a. PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max] gi|356569916|ref|XP_003553140.1| chr4 42287512 42288627 +
2 domain predictions
2 GO terms
Lj6g3v0931350.1
n.a. PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max] gi|356569916|ref|XP_003553140.1| chr6 10262232 10264790 +
2 domain predictions
2 GO terms