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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0142100 |
| Transcript ID | LotjaGi3g1v0142100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inositol-1,4,5-trisphosphate 5-phosphatase 4 isoform 1; TAIR: AT1G70160.1 zinc finger MYND domain protein; Swiss-Prot: sp|Q9FNM7|RH26_ARATH DEAD-box ATP-dependent RNA helicase 26; TrEMBL-Plants: tr|K7MRT1|K7MRT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0142100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:18851523..18857248) extracted from Lotus japonicus Gifu genome v1.2.
AATAAGTGAGATCTAGTTTGAATGAATGAAGTTAAGATAAACTTGAGGAGTATTTTACTCTCCGCCTGGTTGGCCTACAC CTCCACGTACCTGGAAAATCGATTCCCAGCTGGAAAGAACAATTCCCTCTTTCTGAACAAAACCCTCTCCTGATCCTGAT TCCAAATCCCAAAAGTCCAATCAAATGAACCAACAAAATCAATTAATCAATTAAATCCCCCAGCAAAACCCAGATTTGTT AAATTAATGGCGTTACGTTTTATTCTCTTGATCATCACAATATTAATTGGGTTTGGGTTTGGGCCGCGTGACTCGAGCGC TCTGAAAGTGCCGTTTAGAGTAAACGACGTGCTTCCCATTCTCCCACGCGGCGTTTCATGGCCGGTTCTCAATAACCTCC ACAGTGCCGTTGATTTGCTTCCTTATTTTGTCGGTTCCGTCACTCCCACCACCAATGGCTCCATTCAATGGAAAGGGGCT TGCTTCTTTGATAACAAAGCCACTCTTGAGTTCACTCACACAAATCATTCTTCATCGCGTGCCGTTCTCTATCTCCAGGT TCCTTTTTTCATCCCTTTTACCTTCCTAAATTTGAAGCATCAAATTAATTTAATGGGCTCAATATGCATTCATACTCATA ATTTGATTTAACATTCAATAATGAACGAGTGGTTGGTTTGAGTGGTACATGTTTTATTCCCTTAAGTAAGGTCCTGAGTT CGAGTGTTGTGGATGGAAAAAATCTCCGTTGGGAGTGTTAGCCGCTCCACCATGATGTGGACGTTCCTGGCTTGAACAAA AATTGCCTCCAGTGTTGGATACCTATAAGCACCGAAAAGACATTCAATAGGCATATTTAGGAACTTTGAGTGTAATTTTC CTTATATACTACAAAGACTAATTCAACTAGTTATTTTAATTTAGTGATGTCAATTTTGTTGTATTTGGTTTTGGTGAAAA ATAGTTGTTTTTTCTTATACAGACTGAGGCTGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACGCCTTACA GGATTACATGGGACTACTACTTCTCTGCTCAAGAACACACATTGAAGTTTGACTCATGGGAAGAGCCTGCGGAATTGGAA TATGTACTTTTTTTTATCAAACAAATGGTTCTTTATTTTGTTTAAATCTTGTTATTGCTAACCGATCATTATTGTTAATG AATTGAACAGGTCAAGCAGCACGGGGTTTCTGTGTTTCTTATGCCATCAGGTATGCTGGGAACCCTGCTTTCTCTGATTG ATGTTTTGCCTCTGTTCGCTAACAATGCATGGGGTCAGAAAGCCAACCTGGATTTCCTGAAGAAGCACATGGGGGCCACG TTTGAGAAACGTTCTCAGCCGTGGCGTGCAACTATTGACCCCGCAGATGTTCATTCAGGAGACTTCTTAGCTGTGTCAAA GATCCGAGGTAGGTGGGGTGGTTTTGAGACACTAGAAAAGTGGGTAACCGGTTCCTTCGCAGGTCATACTGCGGTTTGCT TGAAAGATGATATGGGTAATTTATGGGTTGGCGAATCAGGGCATGAGAATGAAGAGGTATAATAACAGGATGAAGTTTTC TAGAATATCCTTTTATTTGTTTACTAAAATTATTCTTGTATTGCCTGATGAATGAGAATGTTGTAGTCGTTTAGGATGGT AACGCCTCTGATCTATTTTAGTAGATTGATAGCCTTACTTGGTGGTCTGTCCCTGTTCAGGGTGAAGAAATAATAGTGGT AATTCCATGGGAAGAGTGGTGGGAATTGGCTCTTAAAGATAGTTCCAATCCACAGATAGCCTTACTTCCCCTGCATCCAG ACTTGCGTGCAAAATTTAACTCCACTGCAGCATGGGAGTATGCGCGGAGCATGTCAGGCAAGCCATATGGTTATCACAAT ATGATATTCAGTTGGATTGACACTGTAGCTGACAACTATCCTCCACCACTTGATGCTCACTTGGTAGTAAACTTTTCCTT ATTGGTTAAAACAAAACAATAGACAATGAGAATATCCAATGTAACCTCAGATTGTATGAACAACATACTGTTTTTTGAGT AGACTACTGTACATTTTATGAAACAATTATGTTTGAACTGGTTGCTTGAAGGTAATTTGAATCAAAAGTGTAAAACAGTC TAGGGAAGAAATAGGTAGAGGTTTTGACATTGGAAAGCAACTTCCTTACTGTTAGAGACACAGAAAGGTACTTGACAATG GGATAGAAGGACTATGTTGGCATCAAGAATTTTCATGAATTTTGCTTATTGCTCGTGATACATACATGTTATCTTTTCTC TTATAAGGGAAAGGGTTCTCGCTTTCTTCCCTGTGTTTGTGCAAATATTGAACCTAAAAGCACATGAAGCAACCAATCTA CACCCTCCTCACTTCCCTGCATATAACAAATTCTAACATTAAGTTCTTAGGCTCAGACTTCAAGTGCTATGGATGTCTGA TTTTGAATATCTTGTTCTCTGTGCAGGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCTGCTTATTCTGCAAAT ATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAGGTAGGTCTTTGCCGCTGATTTGAACCTTTAGTGTGATAAAG AATCTCCATTTACTATATAAGCATATGTAGTCCTTCTTTCTTTTTATTTTCTGAATAAAAGAAGGTTTTCACTGAGATAA AGAGAAGGGAGAATATAAAATCCTGAAGGAAAAAAAACCTGCTTAAAAATCTGATAGTTTCCATTCCAATAAAATGCTCC GAAGTGTAGTCTTTCGTTAATTGCTGATATTTTGTGGGGAACAATTCTGTCCAAACTAGAAGTAGACTTATCTGAGTTGT AGGTTTGCCAATGACCTCAAAGTTTGCTTCTGGTGCTGTCTACTGTATTTGTAACTAACTAGCCCATTGTTTTAAGACTG TAATCAGTGAATTCTAGAAAGAATGTTCATTCTCTCAAACAACCTTTAAATTGTAGTTCAAAGCTATTCTTGAATAACAA AAATTGTTCTTTTCATTCACCACTGGTACCTATCAATTGGTATTAGAGCTCCGATCTTGGAGCTAGGGGTCTTGAACGAT TCCAACATTTGATGGAAGGGAGGCTTATTGTTGGCCGATCAATTTAGAGTAGTATTTGAATCCATTCTAGTACCTGATTA GAAGAAGCTATGATGGGTTTCGATGGGGGTGAGTGAGAGTGCTCGTTGTTGGTGGTTTTGCTGGTGAAGGAGCAACCACC ATAAGGCAACATGGGGGAATTTGTGAAGGCACTGCTCAAGAAGTTTCAACTAGAGGTGAATCCAGACATACCAATCTCGG TTCAAGATGAAGAAGCAGTAACTGATTTAGAATCTGTAATATATCAGTGGGGAAAAAAGATTCCAAAGTAAAAGCCTAGC CAATAGTTGTTAGGGTTAGTTAGATAGAGGGAGTTCCAACTAGTTAGTTAAAAGGCGTGAATTCGAGATTGAGTGAGGTG AGACTATAAATTAGAGGGGGAAAGATTAGGGAGGTTATCTATATTGTAATAACTAATAAGGGAATCTAGGGAGAGTGATG GTTTTCTCAAACAACCAGAAAATTGTAGCTCATAGCTACTTGAATAATAATCAAATTTTCTTCTGATACACTGCTGGTAT TTAACTATTTATCAAGTATCAACTCACGTTAGGATCACTTTCAAGGTATGATACTTGAGTCCCACTATGAGATTTTGGTG TGTGGTTTATAAGGCCCTAGACTCTCAAACTACAACGACTAGCTTTTGTGGTATGGTTCTCACAAAGTTCTTATCAATTG GTATCATAGCCTTACACCATGTCTGCTAGCTGCAAACAAGGGCCACCGCTCAGATTGAGGAGTGTGGAGGGATGTTATGA TTCCTCTCGCAAGTTATTTGAGTCCCACATTGGACGTATGAGATTCTAGTGTGAGATTTATAAGGCCTTTGTTACTCCAA GTCTCCATCTACAACGGCTAGCTTTTGTGATATGTGTTTCCCGAGGTTCTTATAAGACTTCAATATGGAAATATCTTGGT CAATTGTGAAATCTCTCAAGTATGTTAGTATTTTAGGTTTTGCATTTTGTGAGCTGTAATGTTTGTGAGTGTATAGAGCA TGCTGGTTTGTATAAATTTCCTGCAAGTTTTTGTATGCTGCAGTTATTATGATTAAATATCTGAATAGTTCCTCATGGGA AAATTCCACTGTATGACTGTGACTGAATACATCATGTTGTCATCTTTGTTTACTGGTATGATAGGAACTTTGAGGGCATA TTTTTCTGATCTATACACTAGTTGCTTCTTCATTCATATTATTAATGGGATCTCTGATTTTTGTTTGCTTTCAGGGTTTG GATTTGCATGATATTATAGTAGAGACTGAGAAGCGCGGCATACCATTTGATCAATTACTCACCATTCCTGAACAAGATGA ATGGGTATATAGTGATGGGAAATCAACAACTTGTGTTGCCTTTATTCTTTCAATGTATAAAGAGGCTGGGATTTTTGGTC CCTTTTCTAGCTCCATTCAAGTAACTGAGTTCACTGTAAGTCATGATTTCTCTGTGATTGAGTGAACCTTGGGACATCAT ATTTCCTTTTACCAATGTTTCTGTGTTCTTTTATGCAGATTCGCGATGCGTACATGCTCAGATTATTTGAGGATAACCAA ACACGCCTGCCAAGTTGGTGCAACAATGAGAATGACCGGCTTCCATTCTGCCAGATTCTTGGAGAATACAGGATGGAACT GCCTGGCTATAACACCTTGGAGCCATATGCCCACATGAATGAGTACTGCCCTTCCCTTCCTCCAACTTATGATCGGCCTT CTCGATGTTAGATCCTAGATCCGTCTCTCTTCCATTCGCTCTGGTATGGATCAGGATCCTGTCATGTAGAAATTTCACTT GACATTGTCATGTTGAAATATCGTGTGTATATGTCTCTACATAAGTATTAAATAGGTGAGACTCTCTGAATATTAATGAA GAGAGATATAGACATCATATTTCACTTGACATTGTCATGTGAGACGAGAGGATTCTAATCCTTTCTAGTATCTAGAATTG TCTGTTTTTTTATCTTAGGAATTAGGTACTTTGTTGTTCCAAATTGTCTATAAACTATACCACGGGACACTGGATAATGT GTATCTACATCTTGATAGTCAAGTATAAAGAATATTAAAATAGTCAAGTGTAATTAATATTAAAAAGAACTACAAGATTG TAGTTATATCTTGATGATGGTTAGCCAACTGTACAATGATGCAATATGCTTGATCAGAGAGCATATACAAGACAATCACA TGATATCCAAGTTAGAAAAAGAGAAAGCCTTAATAGCATTTTTGGTCCTCACTTATCACGATTTGACAGTTTTGGTCCCT CAAGGAATTTATTAGCCTACAACGTTCTTCACGTTTACTAATTGTTGCAGTTTTGATTTTTTGTGAACTTTCATCCAATA TATAATGACTTTTAATTAAAAAATCAATTAAAAATAAGGCTTGAAGAACAGTTTTATGTTTTTTGATTAACAATTTTATG GTTTCTGGTTTTTTAAAGTGATTTATGAGGGACCAAAACATGCAAATCATGATGGAGGGTTTTATTGTAGATAAGCTAAT ATACAAACGGCCTTTCCATCGAGAATGAGCCTCCAGCTGCTTGACA
CDS sequence (LotjaGi3g1v0142100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTACGTTTTATTCTCTTGATCATCACAATATTAATTGGGTTTGGGTTTGGGCCGCGTGACTCGAGCGCTCTGAA AGTGCCGTTTAGAGTAAACGACGTGCTTCCCATTCTCCCACGCGGCGTTTCATGGCCGGTTCTCAATAACCTCCACAGTG CCGTTGATTTGCTTCCTTATTTTGTCGGTTCCGTCACTCCCACCACCAATGGCTCCATTCAATGGAAAGGGGCTTGCTTC TTTGATAACAAAGCCACTCTTGAGTTCACTCACACAAATCATTCTTCATCGCGTGCCGTTCTCTATCTCCAGACTGAGGC TGCACATAGCTGGACCTGCATGGATTTGTATGTTTTTGCAACGCCTTACAGGATTACATGGGACTACTACTTCTCTGCTC AAGAACACACATTGAAGTTTGACTCATGGGAAGAGCCTGCGGAATTGGAATATGTCAAGCAGCACGGGGTTTCTGTGTTT CTTATGCCATCAGGTATGCTGGGAACCCTGCTTTCTCTGATTGATGTTTTGCCTCTGTTCGCTAACAATGCATGGGGTCA GAAAGCCAACCTGGATTTCCTGAAGAAGCACATGGGGGCCACGTTTGAGAAACGTTCTCAGCCGTGGCGTGCAACTATTG ACCCCGCAGATGTTCATTCAGGAGACTTCTTAGCTGTGTCAAAGATCCGAGGTAGGTGGGGTGGTTTTGAGACACTAGAA AAGTGGGTAACCGGTTCCTTCGCAGGTCATACTGCGGTTTGCTTGAAAGATGATATGGGTAATTTATGGGTTGGCGAATC AGGGCATGAGAATGAAGAGGGTGAAGAAATAATAGTGGTAATTCCATGGGAAGAGTGGTGGGAATTGGCTCTTAAAGATA GTTCCAATCCACAGATAGCCTTACTTCCCCTGCATCCAGACTTGCGTGCAAAATTTAACTCCACTGCAGCATGGGAGTAT GCGCGGAGCATGTCAGGCAAGCCATATGGTTATCACAATATGATATTCAGTTGGATTGACACTGTAGCTGACAACTATCC TCCACCACTTGATGCTCACTTGGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCTGCTTATTCTGCAAATATGT GGAATGAAGCATTGAATAAGCGGTTAGGGACTGAGGGTTTGGATTTGCATGATATTATAGTAGAGACTGAGAAGCGCGGC ATACCATTTGATCAATTACTCACCATTCCTGAACAAGATGAATGGGTATATAGTGATGGGAAATCAACAACTTGTGTTGC CTTTATTCTTTCAATGTATAAAGAGGCTGGGATTTTTGGTCCCTTTTCTAGCTCCATTCAAGTAACTGAGTTCACTATTC GCGATGCGTACATGCTCAGATTATTTGAGGATAACCAAACACGCCTGCCAAGTTGGTGCAACAATGAGAATGACCGGCTT CCATTCTGCCAGATTCTTGGAGAATACAGGATGGAACTGCCTGGCTATAACACCTTGGAGCCATATGCCCACATGAATGA GTACTGCCCTTCCCTTCCTCCAACTTATGATCGGCCTTCTCGATGTTAG
Protein sequence (LotjaGi3g1v0142100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALRFILLIITILIGFGFGPRDSSALKVPFRVNDVLPILPRGVSWPVLNNLHSAVDLLPYFVGSVTPTTNGSIQWKGACF FDNKATLEFTHTNHSSSRAVLYLQTEAAHSWTCMDLYVFATPYRITWDYYFSAQEHTLKFDSWEEPAELEYVKQHGVSVF LMPSGMLGTLLSLIDVLPLFANNAWGQKANLDFLKKHMGATFEKRSQPWRATIDPADVHSGDFLAVSKIRGRWGGFETLE KWVTGSFAGHTAVCLKDDMGNLWVGESGHENEEGEEIIVVIPWEEWWELALKDSSNPQIALLPLHPDLRAKFNSTAAWEY ARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVISVMSMWTRLQPAYSANMWNEALNKRLGTEGLDLHDIIVETEKRG IPFDQLLTIPEQDEWVYSDGKSTTCVAFILSMYKEAGIFGPFSSSIQVTEFTIRDAYMLRLFEDNQTRLPSWCNNENDRL PFCQILGEYRMELPGYNTLEPYAHMNEYCPSLPPTYDRPSRC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| PANTHER | 7 | 522 | 516 | 0.0 | – | |
| PANTHER | 7 | 522 | 516 | 0.0 | – | |
| Phobius | 17 | 25 | 9 | - | – | |
| Phobius | 26 | 522 | 497 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0142100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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