Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0146600 |
| Transcript ID | LotjaGi3g1v0146600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Interactor of constitutive active ROPs protein, putative; TAIR: AT1G78430.1 ROP interactive partner 2; Swiss-Prot: sp|Q9M9F9|ICR4_ARATH Interactor of constitutive active ROPs 4; TrEMBL-Plants: tr|V7BW93|V7BW93_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0146600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19600255..19605501) extracted from Lotus japonicus Gifu genome v1.2.
ATGTACAAAATGTGCATAACCCAACCACACTATTGTTAGCTTAAGTAGATGATTCTGATGTCAGGCACGTGGACAATTTG GTTTTGTGACTTTGTCCACTCTTACAAAATCGAACACTTCCCAAACGGCGAAGCAAAATCCAATCCTTATTATATGTAAC ATTACATTATTTTCTACTCCAGCATTAAATTTTCACACAACCAATTAATGGTTTTCAAATCAAGAGCTCAAAGCACGCAC GCAGTGTTGGAACAAAACAAGAGGAAAATGTTAAAATACATAGCAAAGTTTTTGAATGTGGAGAGAAACTGACAAAAAAA GACAAGAAACTCTAGAGCGTAGGATACAAGTGGGTTTTCCAAGAGGGGGCAAAGACTCATAACATTAAATTATTGGGTAC CTGTTTTCCCAAAATGACCCTCTTGTTTTTGTACTCTTCCTCCTCCCTTTGTTTGAAAGTTGAAACTCATAAATAAACAC TACTAGCTACTGGCTAGTGCCACAGTTCCTAACAGCTTTAATTCAAATTTTCAAAACACCATTTCTCTCCACTCTCCTTA ATTCTCCTTTCTAGTTTCTTCAACTTCCTGGTTTTCTGGTTCTGGCTTCTGGGTATGTTTTTTCCTACCTCATTTTTTCA TTTTCTCTCAAATAGAAGCACTCCTAAACTGTTTTTAGTCTTTTCTGAGAAATTTCTCTCTTTTCATTTGCAGTAGACTT CTCTCTTCCACACTACAAGATGCAATAGCTGAATAAGAGTGTGATGAAGGTGAGTGCTTCCCACTAGCCAATGTTTGTAG CTTCTATGATTTTTCTTTATCTTTTGTGTTTTTGCCTACCAAATACACCAATATTGAACACACATTTGGAGAATCATCAT CTGTATTGCCATTATAATCTTAGTGGTTCCTCTGCAATATGCAGTGAGTGACCATTGACACTTGTCTTTTGAATGCCTTT TGTTTATAGAATTTTTTCAACTGGTCAAATCATTTCATTTATATATCTTTTAAAGAAAGTTTTTATGAGACCTAATAAAT GTTACTTTTAAATCTTTGATTATACTATCACTGTAAAGCTTTTATTTATGATACTACTTTTTAAAATTCTGAAACTGGTA TGATAATGTAACAATCACTGATTATTAGTGTCTGGAGCAACAATACCACTTTTTTCAAATTTTATTTTTGTCTAGAGCTG GGATAAAATCTTCTCATGTGGTAATTTTTTTTTAATCTTTGTCCACTCTCTTTGAGAGTACTGTAGCTTTGGAAAGTTGC CTCTCTCCTGTCTCCACCAACCATAACTTTATCTTCATATGTATAGAGATTCACAACTTAATCCTATAGAAATAACTTTT CCCATAAACATATCCAAACATAAATTATTTCATTTTCAACTCATTTTTACTATAATCAATTTTATCCAAATCAATTGTGA TAAACACTGATCCAAACACGCACTTAGACTACAAAGCAGAGGCCAAGGTGAAAAGCATTGATATATCTACTATTGCAGTT GTATCTCTGTCTACTGCACTTTGCAAATGCAACCACTTGAATTTCTGGTGGGCCTAGTGTAATTAATAGGAAAGTGAAGC AGTTACTTCTTTGCTAGCAGTATCAGGTTTCTCATATGCATAGGCTCACATCAATTATTTTTTCCATTCTTGGGGTGACA ATAGTATTAATTTACTCCTTATTCCTCTGTAACACATACAACATTTACAGCACTTACTTGCTTTTAACCAAAGCAAAAAG CACTGGATAAAGTGCTCTCTGACTCTGCATGCTTTTCTCTTGGGGTGGTAGTAAAGACATGCTCGTTTTAGCATGTCATT GTTTGAACTTTGAACACAGAACCTGTGTGATATGTGGGGCATTTTTATTCACCTTTTCATTATTTTCTCTTCTTGTTTTT TTCTGAAAGTTCCATATCTACCTTTCTAGTTTGTACTGGAAGATAATTCTTAGTATCTTCGGTTTAAATCAATTGCCTTT TAGTTTAATAGTCACGGTTGTAGTGAGTTGTCTCCTTTATGTGGGTTCAAGGCCATAAATATTCATAGCCATTGATGTTT TTCTTTGTCCTTCAATCTCTTACCTAATTATGGTTTCTTGGAGGTTGAGGCCAGATCCCAGATGGCAGAATATGAAAGCC TAACCACTATTAACTTGAAAATAGTCCATTTTGCTTAATGGTGTCTTTAAAGAAGGCCAGTGAAATCTGGAACTGGAAGG CCATTTTCTCATTATCCTTTCTCTTCTGTTAAAAGAATGGTGGTGAATGTCAATACAAAATTGCTGAGTTCAATGCTCCC CACTCTACCTCTTTTATTATAAATGATGGTACATTGTTTCTTGTGTCAGGTTCTGCCCATGGGCCTTAATTCTTGATTTT CTATTTTGAAAAAATAAATATATTTCTATTATGTATACTGCATATTTATCTCTAGTTTGTGCTATATTGGATGGAGTTAG TTGGTCATACATTTTATTCATTTGAACTTTCATCTTTGTTACTTTTAGCAGGTGAGACACATTTAGCTAACAAATTTTTG AAGTGCTGATCTACTAATTGCTAATCAAATCAAGCATATAAAATGCCAAGATCAAGGTATGATTAGCTTACCCATCAGCT ATATAATGCTGTGCTTCCTAATTCTAGTTTCTCTATCTCTATGTTCTCTGTTTTCCTTTTTCATATACAAAGCAATGCAT GTCATACTTGGTGCTGATTGTTGTTGGTATCTCTTCTGCATCTTTAGATTTGGTTTTTCCCTGATTCTAATTTTCTCCTT TTGTGAAGCATAACATGTTTATGATGATAGGAAATATCATAACTGTTAATAATGAAAACTACTTTTTAGCCAGCACTAAA TTCAACATAAGTCTTGGCTTTTTGATCAAGATGTTGGGAGTGAGATTCTTGTGACATTGATAATAGGAAATTTTGTTCAA CTTAATGATGCACATCCGATAACATCCTAAGTTTCTATTAGTGTTTGGTTCTCCAGTAGAAAACTCCATAATTGTTTATG GGGAAAAGCAACAGAGTGTTGTTTTTTTGGAGTTATCATGCCTTGGATTGTATGCTCACTATCAACCTAAACACACTATA ATTTGATTTAGTTTGTTAAGAACATCAATAGATAATCCCTATAAGGATGGAATTCAAGATCACCACTGTGAAGATGGAAC CATGGTCTCTCTGCTTCTGCTTTTTGTCTATGTTGTTATTTGATCTTTGTGCTACTAATCATGTAATGAAAAATTTAGTG AAATTGAGTTATCAAACTACAATCATGATATGGAACATGTAAGTTTCTATGTTGTGTCCAATGATGAGAAGGGCCAATTC AAATATCTGTTTCTGTATGTAGTTTTTGAAGAACCTCTCTTTAATTTGTTTTTTCTTGTATAGGGGATCTGATTTGCCTC AGAGGCAGTCTCCACGAGGTCCTCATCAACTTCGCACATCGAGTTCTGATTCAGATCCGTTACATCATCGACCGATTGCC GACCGAAGTCCAAAGGTTGGAGACCGGCGTTCGCCAAGAAGTACAACTACTCAATCTGATAATACTCTAAATCAGAAAAA GCTAGGAACCCGCATTGCGGATTTGGAATCTCAGCTTGGCCAAGCACAGAAAGAGTTGAAAAACTTGAAGGACCAGCTAG CTTCTGCTGAAGCTGCAAAGAAAGAAGCGCAAGAAAAACTAGTTAAGAAAGCTGATCAATCAGTAGTAGTGCCAGTAGTG GAGAAGTTCCAAGAGAAGCGTGCTTCCGAGAACGCTCGAGAATTTAATGAAACTGAAAACAAGCCCCAAGATATCATCAT TCCTGATAATGACATTGAAAACCATCAAGAAACTGATGTGTTTGAAGTTGTTCCAATTGAGAAGGTGGCAATTGAATTCA CAAAACCTGCAACAACAGATCAAATTGAAAAGGAAACTCAACCATCTGAAGACTCAACAACTCCACCAGATGCACCGAAG CCGGAAATACCTTGTGTGGATGAAATGACCCTGAAGAATGACGAGATAGCATTGCTGAAGTGTAATTTGGAAGAGAAAGT GACGGAGCTAGAGTCAATGAGTAAGGAAAATGAGAATCTGAAACAACAGCTTAATGAAGCAGTTTCAAAAGTTTCAGAAG CTGAAACCAAGGAAGAAGGAATGAAGTTGCAGCTGAAAGAACTAGGTGAAGAGTTGGAAGCTGCTAGTAAACTGAATGCA GAGAAGTTGAAATGTGTGGAAGCAGAAAAGGAGGTTATGGAATCAGAGATGAAGAAGCTGAGGGTGCAGACTGAGCAGTG GAGAAAAGCAGCCGATGCAGCAGCAGCAGTGCTTGCAGGGGATGTGGATATGAGGATTCCTGAACGGTGTGGCTCCATGG ATAAGCACTTTGAGACACCTGTTGTTGGTAGGTACAATGGATATGTTGGGTCTCCTGGTGTGGCTGATGACTTTGACGAT GGTTTTGGAGGCGGAAAAAAGAAGGGTTCTGGAATTAGAATGTTCGGCGATTTATGGAAGAAAAGGGGCCAAAAGTGATT GATTTCTGCTCCTATTATTCAGTGAATGAAGTAGTAGTAGTACTTTAGTCATGTTTTTGGTGGTAGAAGAAGGTGCAATA GCAGTTGCTTACTGTGGTGCATCTTCTTCATACATATTGTTGTCATTTCTGGTATGAAGGCCATTAAGCGGGTAGTGTTG TTGCTATTGTATGATCTGTGAATGTGAACTTGTGAAAGATGGTTTATATCCCTTCTCTTAGGGAGAGATGAAGGCACTTT TTCTTGGAAGGCCTGTTTTTAATCAAATTCTTCATTCTGCACTCAGTTACAGTAATAATATATTTAGAGTTCGTTTGTAT GAGGGTTCACATCGCCTTAAACACACGTATTTTCTGAATTGACAATGTATAGCTGTTGGAGCAACGCACGTATGGGTGGT TCAAACGCCTATACAAACAGGCACTTATTATAACATGTATCGTTTTTCTTAGCTTCTGGTTGATTCTGAAATTCAACCTT CAAAATGTCTAAAAATATAAGTAATGTTTGAAAATAGTGGGAGAAGTAAAGCTAGCTATTAGCAGGAAAAGAGATAGATC AAACCATGAAAAGTGACAGCCTTACTGCCTAGGTGATTTCCACTTAAGTTCTAGATAAACGATTCATGTACCAACAGGGA AGCTACAAAATTGATGTTATGTTCCACTTCATTTATATTGAATTTGC
CDS sequence (LotjaGi3g1v0146600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAGATCAAGGGGATCTGATTTGCCTCAGAGGCAGTCTCCACGAGGTCCTCATCAACTTCGCACATCGAGTTCTGA TTCAGATCCGTTACATCATCGACCGATTGCCGACCGAAGTCCAAAGGTTGGAGACCGGCGTTCGCCAAGAAGTACAACTA CTCAATCTGATAATACTCTAAATCAGAAAAAGCTAGGAACCCGCATTGCGGATTTGGAATCTCAGCTTGGCCAAGCACAG AAAGAGTTGAAAAACTTGAAGGACCAGCTAGCTTCTGCTGAAGCTGCAAAGAAAGAAGCGCAAGAAAAACTAGTTAAGAA AGCTGATCAATCAGTAGTAGTGCCAGTAGTGGAGAAGTTCCAAGAGAAGCGTGCTTCCGAGAACGCTCGAGAATTTAATG AAACTGAAAACAAGCCCCAAGATATCATCATTCCTGATAATGACATTGAAAACCATCAAGAAACTGATGTGTTTGAAGTT GTTCCAATTGAGAAGGTGGCAATTGAATTCACAAAACCTGCAACAACAGATCAAATTGAAAAGGAAACTCAACCATCTGA AGACTCAACAACTCCACCAGATGCACCGAAGCCGGAAATACCTTGTGTGGATGAAATGACCCTGAAGAATGACGAGATAG CATTGCTGAAGTGTAATTTGGAAGAGAAAGTGACGGAGCTAGAGTCAATGAGTAAGGAAAATGAGAATCTGAAACAACAG CTTAATGAAGCAGTTTCAAAAGTTTCAGAAGCTGAAACCAAGGAAGAAGGAATGAAGTTGCAGCTGAAAGAACTAGGTGA AGAGTTGGAAGCTGCTAGTAAACTGAATGCAGAGAAGTTGAAATGTGTGGAAGCAGAAAAGGAGGTTATGGAATCAGAGA TGAAGAAGCTGAGGGTGCAGACTGAGCAGTGGAGAAAAGCAGCCGATGCAGCAGCAGCAGTGCTTGCAGGGGATGTGGAT ATGAGGATTCCTGAACGGTGTGGCTCCATGGATAAGCACTTTGAGACACCTGTTGTTGGTAGGTACAATGGATATGTTGG GTCTCCTGGTGTGGCTGATGACTTTGACGATGGTTTTGGAGGCGGAAAAAAGAAGGGTTCTGGAATTAGAATGTTCGGCG ATTTATGGAAGAAAAGGGGCCAAAAGTGA
Protein sequence (LotjaGi3g1v0146600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPRSRGSDLPQRQSPRGPHQLRTSSSDSDPLHHRPIADRSPKVGDRRSPRSTTTQSDNTLNQKKLGTRIADLESQLGQAQ KELKNLKDQLASAEAAKKEAQEKLVKKADQSVVVPVVEKFQEKRASENAREFNETENKPQDIIIPDNDIENHQETDVFEV VPIEKVAIEFTKPATTDQIEKETQPSEDSTTPPDAPKPEIPCVDEMTLKNDEIALLKCNLEEKVTELESMSKENENLKQQ LNEAVSKVSEAETKEEGMKLQLKELGEELEAASKLNAEKLKCVEAEKEVMESEMKKLRVQTEQWRKAADAAAAVLAGDVD MRIPERCGSMDKHFETPVVGRYNGYVGSPGVADDFDDGFGGGKKKGSGIRMFGDLWKKRGQK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 382 | 382 | 2.6E-137 | – | |
| PANTHER | 1 | 382 | 382 | 2.6E-137 | ||
| MobiDBLite | 1 | 68 | 68 | - | – | |
| MobiDBLite | 7 | 25 | 19 | - | – | |
| MobiDBLite | 26 | 46 | 21 | - | – | |
| MobiDBLite | 47 | 65 | 19 | - | – | |
| Coils | 62 | 110 | 49 | - | – | |
| MobiDBLite | 123 | 156 | 34 | - | – | |
| MobiDBLite | 171 | 202 | 32 | - | – | |
| Coils | 213 | 307 | 95 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0146600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…