Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0147500 |
| Transcript ID | LotjaGi3g1v0147500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hydroxyacylglutathione hydrolase; TAIR: AT1G53580.1 glyoxalase II 3; Swiss-Prot: sp|Q9C8L4|ETHE1_ARATH Persulfide dioxygenase ETHE1 homolog, mitochondrial; TrEMBL-Plants: tr|A0A072VK05|A0A072VK05_MEDTR Hydroxyacylglutathione hydrolase; Found in the gene: LotjaGi3g1v0147500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19819398..19821959) extracted from Lotus japonicus Gifu genome v1.2.
TTACTATTTATTTATATCACCAAAATGCTTCGCTTCCACTTCATCAAACTCACCTCTCTCTTCCCTCCCAAACCCTCACC ATTTCCACTTCGATCACAAATGGGTTCGTTTTCCACTTCCACTTCCTCTTCCTCCAAGCTCCTGTTCCGCCAGCTTTTCG AGAAGGAATCGTCTACCTACACGTATCTTCTTGCTGATTCTTCACACCCTGATAAACCAGCACTTGTGAGTTGCTAATTT TCAAGCTTTTATTGGATTGGATGATGGGTTTGTTTTGTTTCTTATGATCAATGGGAATTTTTGTTTTTTTTGTTGTTGTT GGAAATTCAGTTGATTGACCCGGTTGATAGGACAGTGGATAGAGACTTGACACTTATTAAAGAGCTGGGTTTGAAGCTTG TTTATGCCATGAACACACATGTACATGCAGATCATGTCACTGGGACTGGCCAAATCAAGGTATGCAGATAGACCTGATAT GGCTCTTTCAATTAAGTGAAATTTGTGAAAAACAGATTCTATTGGTGAGCAAGAAATTATGTATCTATTTTAATTTTACT TGAGGGAAGAAATTATGTATGCATCTTAATTGAATGAATGTTCAGATATGAAAACCACGGTAAAGCCAAAATCAACTGTG ACAAAAGATTAAGGCAGTTGCTGCTGTATATACTGTGATTTTGGCTTCACCGTGGTTTTCAAATGTGCATCCAAACGTAC ACTTAGTTTAAAGTATATTTTGATGTTAAACCAGCTGATATTTGCATGTAGGTATATACCCTTTACTCAGTTCATTTAGA AACTTTTTCAATATTTGTTTCTACGAGCGGTGATAGCATTAGGCTTTGTTACTCTTTCTGAATACACTCTTTATTATTGG GTGAAATTCGTGTGGATTTCACTAAGTCATGTGAGTATGACTAAATGTTTGGTGGGATCTACATGCATTTCATCCGATAT CAGCAAGTTTCTAAAAAGAATGTGCTAAAGGGTGTGTTTCTAGCATTTCTCTTGTTATTACTTTGCTTTGGTAGTAAATT AGCGTGTTTCTGTTATCCACTTGTTTTGTATAGGGAAAAGTTCCTGATGTAAAATCTGTTATTTCAAAAGCAAGTGGTGC AAAAGCAGATTTACATGTGGTGCCAGGCGATAAAATCCACTTTGGTAATCTTTTTCTTGAGGTAACTCTGCAGCTGCACA CCTAGTTTGATGTTGACACTTATTTTGGTTATGTGATGCCTTGTAATCAGTGTCATAAATTGGTTTTCAACCAGTACTGT TTCCTAATGAGAGGAAATTCTGAAAGCCTCCTTGCTTTTCACTAAGCTTTAAACATGATTTGCTGCTCGGACTGCCTATT TGTTTACAGTGTTAGACAAATTTGATAATTGGGTCTGAAAAACTCTAAGATAAGGTGGACTCTGTTAAAATATCATTTAA GTGATGGCTATCAGTATTTCCAGATAATAAGAACTCTGATTAGTCAAGCAGATGGAGAGATCACAGAGATGTTTCTAGTT GCACCTTATTCTCATACTAAATAGTGAAATTGTTGCAAGCTGGCTCATTATGGCTGTAATCTTGTCCAAAAAAATTGAAG GGAAAATCATGGATAACGTCACCTTATTTTATTGTAAATGAAATATAGATTTTGGTTTTATTATACTAACATATATTTGG GATATTGAAAAGAATGATCCAGGCAAAGTACCTGTAGTCCCTGTTTAAGGGTTCCTCTTCAAGAATCTTTTCTTTTCGTT TATTTATTAAATAGATCTCATTTTCTCTTTCGTGGATAGGTGTGGATGGCTCATGTAATGGTTTATTGTACTATCTACTG TGTAAAACATATTATTGTTTTTATAACTTTATTCATGTAGGTTCGTGCAACTCCTGGTCATACTGCGGGTTGCATTACCT ATGTTACAGGAGATGGACCTGATCAACCTCAACCTAGGATGGCATTCACTGGAGATGTCCTATTAATACGTGCATGTGGA AGGACAGACTTTCAGGTATGTATCAGTTACTGCTTCTAAAAGGTATTCATACTTGTATCTACACAAAGGATATGCTAGCT CAATGTTATAGAAGGATATGGGGCTGGGTTTTGGTCTTGCTGGCGAATTTCTAGTATCATCTCAAAGTTATTTTATGGTA TCTGATTTCCAATTAATCATTATGCAGGGTGGGAGTTCAGAGCAGCTTTACAAATCAATCCATTCACAGGCATGAACTGT GTATTATGTTAAATAGCAATTAAAAAGAACGTAAAGAGATAAGATGTCTCTGGTTTATTGAATTTGGGTATTAATAATTA ATCACTCTGCCATGTCTTTTTTGGTAACAGATTTTCACACTGCCGAAGGACACATTGATCTATCCAGCTCATGATTACAA GGGATTCACTGTAAGGAGACCTTTAAGCTTTTTGCTTGCCTAATTATATAGTTTCTTATGTACAATTGCTGAATTTAGGT TAGCACTGTTGGAGAGGAGCTGCAATATAATCCACGCCTAACAAAGGATGAGGTAATGTTTAATGACATCCGTAATTTAT AG
CDS sequence (LotjaGi3g1v0147500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCGCTTCCACTTCATCAAACTCACCTCTCTCTTCCCTCCCAAACCCTCACCATTTCCACTTCGATCACAAATGGG TTCGTTTTCCACTTCCACTTCCTCTTCCTCCAAGCTCCTGTTCCGCCAGCTTTTCGAGAAGGAATCGTCTACCTACACGT ATCTTCTTGCTGATTCTTCACACCCTGATAAACCAGCACTTTTGATTGACCCGGTTGATAGGACAGTGGATAGAGACTTG ACACTTATTAAAGAGCTGGGTTTGAAGCTTGTTTATGCCATGAACACACATGTACATGCAGATCATGTCACTGGGACTGG CCAAATCAAGGGAAAAGTTCCTGATGTAAAATCTGTTATTTCAAAAGCAAGTGGTGCAAAAGCAGATTTACATGTGGTGC CAGGCGATAAAATCCACTTTGGTAATCTTTTTCTTGAGGTTCGTGCAACTCCTGGTCATACTGCGGGTTGCATTACCTAT GTTACAGGAGATGGACCTGATCAACCTCAACCTAGGATGGCATTCACTGGAGATGTCCTATTAATACGTGCATGTGGAAG GACAGACTTTCAGGGTGGGAGTTCAGAGCAGCTTTACAAATCAATCCATTCACAGATTTTCACACTGCCGAAGGACACAT TGATCTATCCAGCTCATGATTACAAGGGATTCACTGTTAGCACTGTTGGAGAGGAGCTGCAATATAATCCACGCCTAACA AAGGATGAGGTAATGTTTAATGACATCCGTAATTTATAG
Protein sequence (LotjaGi3g1v0147500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRFHFIKLTSLFPPKPSPFPLRSQMGSFSTSTSSSSKLLFRQLFEKESSTYTYLLADSSHPDKPALLIDPVDRTVDRDL TLIKELGLKLVYAMNTHVHADHVTGTGQIKGKVPDVKSVISKASGAKADLHVVPGDKIHFGNLFLEVRATPGHTAGCITY VTGDGPDQPQPRMAFTGDVLLIRACGRTDFQGGSSEQLYKSIHSQIFTLPKDTLIYPAHDYKGFTVSTVGEELQYNPRLT KDEVMFNDIRNL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 249 | 238 | 1.4E-131 | – | |
| PANTHER | 12 | 249 | 238 | 1.4E-131 | – | |
| Gene3D | 37 | 251 | 215 | 1.2E-82 | ||
| CDD | 40 | 221 | 182 | 4.68935E-76 | – | |
| SUPERFAMILY | 48 | 243 | 196 | 7.84E-45 | ||
| Pfam | 50 | 219 | 170 | 1.5E-11 | ||
| SMART | 50 | 219 | 170 | 5.1E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0147500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…