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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR036866
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We have found 52 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.866s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G53580.1 glyoxalase II 3; Swiss-Prot: sp|Q9C8L4|ETHE1_ARATH Persulfide dioxygenase ETHE1 homolog, mitochondrial; TrEMBL-Plants: tr|I3SCH3|I3SCH3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0022400 LjG1.1_chr1 2754880 2758719 -
n.a. Ribonuclease Z family protein; TAIR: AT2G04530.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|Q8L633|RNZC_ARATH Ribonuclease Z, chloroplastic; TrEMBL-Plants: tr|A0A151U1G9|A0A151U1G9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0068900 LjG1.1_chr1 9504625 9509534 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT3G10850.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O24496|GLO2C_ARATH Hydroxyacylglutathione hydrolase cytoplasmic; TrEMBL-Plants: tr|I3SRG4|I3SRG4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129000 LjG1.1_chr1 20553821 20559048 -
n.a. Ribonuclease J; TAIR: AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein; Swiss-Prot: sp|P54122|RNJ_CORGL Ribonuclease J; TrEMBL-Plants: tr|G7J5I7|G7J5I7_MEDTR RNA-metabolising metallo-beta-lactamase; Found in the gene: LotjaGi1g1v0237600 LjG1.1_chr1 56571390 56582399 +
n.a. Ribonuclease J; TAIR: AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein; Swiss-Prot: sp|P54122|RNJ_CORGL Ribonuclease J; TrEMBL-Plants: tr|K7KL53|K7KL53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0237600 LjG1.1_chr1 56571639 56581668 +
n.a. Ribonuclease J; TAIR: AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein; Swiss-Prot: sp|P54122|RNJ_CORGL Ribonuclease J; TrEMBL-Plants: tr|K7KL53|K7KL53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0237600 LjG1.1_chr1 56571650 56581596 +
n.a. Ribonuclease J; TAIR: AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein; Swiss-Prot: sp|P54122|RNJ_CORGL Ribonuclease J; TrEMBL-Plants: tr|I1JXI6|I1JXI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0237600 LjG1.1_chr1 56573459 56581596 +
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 LjG1.1_chr1 61745680 61769163 -
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 LjG1.1_chr1 61747411 61769061 -
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 LjG1.1_chr1 61747440 61769040 -
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 LjG1.1_chr1 61748184 61766495 -
n.a. DNA cross-link repair 1A protein; TAIR: AT2G45700.1 sterile alpha motif (SAM) domain-containing protein; Swiss-Prot: sp|Q38961|SNM1_ARATH DNA cross-link repair protein SNM1; TrEMBL-Plants: tr|A0A151QYV3|A0A151QYV3_CAJCA DNA cross-link repair 1A protein; Found in the gene: LotjaGi1g1v0372700 LjG1.1_chr1 85102438 85108710 +
n.a. DNA ligase; TAIR: AT1G66730.1 DNA LIGASE 6; Swiss-Prot: sp|F4HPZ9|LIG6_ARATH DNA ligase 6; TrEMBL-Plants: tr|A0A0L9TDF0|A0A0L9TDF0_PHAAN DNA ligase; Found in the gene: LotjaGi1g1v0545100 LjG1.1_chr1 107437610 107451847 -
n.a. DNA cross-link repair protein; TAIR: AT3G26680.1 DNA repair metallo-beta-lactamase family protein; Swiss-Prot: sp|Q38961|SNM1_ARATH DNA cross-link repair protein SNM1; TrEMBL-Plants: tr|A0A151T990|A0A151T990_CAJCA DNA cross-link repair protein SNM1; Found in the gene: LotjaGi1g1v0636500 LjG1.1_chr1 119153515 119157355 -
n.a. Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp|Q8LGU7|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr|A0A1J7GWT5|A0A1J7GWT5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000 LjG1.1_chr2 2119014 2126883 -
n.a. Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp|Q8LGU7|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr|A0A1J7GWT5|A0A1J7GWT5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000 LjG1.1_chr2 2119014 2126883 -
n.a. Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp|Q8LGU7|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr|A0A1J7GWT5|A0A1J7GWT5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000 LjG1.1_chr2 2121759 2125636 -
n.a. Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp|Q8LGU7|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr|I1ND53|I1ND53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000 LjG1.1_chr2 2121759 2125654 -
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072300 LjG1.1_chr2 18116391 18135692 -
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072300 LjG1.1_chr2 18119408 18134263 -
n.a. Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 LjG1.1_chr2 51446115 51460968 +
n.a. Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 LjG1.1_chr2 51446214 51448418 +
n.a. Cleavage and polyadenylation specificity factor subunit 2-like protein; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A0B0PTU3|A0A0B0PTU3_GOSAR Cleavage and polyadenylation specificity factor subunit 2-like protein; Found in the gene: LotjaGi2g1v0141300 LjG1.1_chr2 51446214 51454903 +
n.a. Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 LjG1.1_chr2 51446214 51454903 +
n.a. Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 LjG1.1_chr2 51446257 51454903 +
n.a. Metal-dependent hydrolase; TAIR: AT1G29700.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|Q7VNP2|DUSB_HAEDU tRNA-dihydrouridine synthase B; TrEMBL-Plants: tr|V7C7U6|V7C7U6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0280500 LjG1.1_chr2 75216879 75222744 +
n.a. Ribonuclease Z; TAIR: AT3G16260.1 tRNAse Z4; Swiss-Prot: sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2; TrEMBL-Plants: tr|I1M5I2|I1M5I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0019500 LjG1.1_chr3 2030870 2036581 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.2 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|C6TKG9|C6TKG9_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0032100 LjG1.1_chr3 3426706 3431094 +
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I1MD49|I1MD49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032100 LjG1.1_chr3 3427403 3430423 +
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I1MD49|I1MD49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032100 LjG1.1_chr3 3427408 3430423 +
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I1M574|I1M574_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032100 LjG1.1_chr3 3427674 3430423 +
n.a. Integrator complex subunit-like protein; TAIR: AT3G07530.2 integrator complex subunit; Swiss-Prot: sp|A7SBF0|INT9_NEMVE Integrator complex subunit 9 homolog; TrEMBL-Plants: tr|A0A1J7GXA9|A0A1J7GXA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0112900 LjG1.1_chr3 13902517 13908961 -
n.a. Integrator complex subunit-like protein; TAIR: AT3G07530.2 integrator complex subunit; Swiss-Prot: sp|A7SBF0|INT9_NEMVE Integrator complex subunit 9 homolog; TrEMBL-Plants: tr|A0A1J7GXA9|A0A1J7GXA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0112900 LjG1.1_chr3 13902517 13908961 -
n.a. Integrator complex subunit-like protein; TAIR: AT3G07530.2 integrator complex subunit; Swiss-Prot: sp|A7SBF0|INT9_NEMVE Integrator complex subunit 9 homolog; TrEMBL-Plants: tr|A0A1J7GXA9|A0A1J7GXA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0112900 LjG1.1_chr3 13902637 13908956 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G53580.1 glyoxalase II 3; Swiss-Prot: sp|Q9C8L4|ETHE1_ARATH Persulfide dioxygenase ETHE1 homolog, mitochondrial; TrEMBL-Plants: tr|A0A072VAN8|A0A072VAN8_MEDTR Hydroxyacylglutathione hydrolase; Found in the gene: LotjaGi3g1v0147500 LjG1.1_chr3 19817790 19823501 +
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G53580.1 glyoxalase II 3; Swiss-Prot: sp|Q9C8L4|ETHE1_ARATH Persulfide dioxygenase ETHE1 homolog, mitochondrial; TrEMBL-Plants: tr|A0A072VK05|A0A072VK05_MEDTR Hydroxyacylglutathione hydrolase; Found in the gene: LotjaGi3g1v0147500 LjG1.1_chr3 19819398 19821959 +
n.a. Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT3G13800.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr|G7LHH5|G7LHH5_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi3g1v0424100 LjG1.1_chr3 83347604 83355604 +
n.a. DNA repair metallo-beta-lactamase family protein; TAIR: AT1G27410.1 DNA repair metallo-beta-lactamase family protein; Swiss-Prot: sp|B0V2S2|DCR1B_DANRE 5' exonuclease Apollo; TrEMBL-Plants: tr|A0A072TG27|A0A072TG27_MEDTR DNA repair metallo-beta-lactamase family protein; Found in the gene: LotjaGi3g1v0461700 LjG1.1_chr3 87670442 87685751 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I3SKI5|I3SKI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500500 LjG1.1_chr3 91868753 91876796 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I3SKI5|I3SKI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500500 LjG1.1_chr3 91870153 91875728 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I3SKI5|I3SKI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500500 LjG1.1_chr3 91870153 91875848 -
n.a. Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr|I1K3H5|I1K3H5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0362000 LjG1.1_chr4 74083001 74089099 +
n.a. Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr|I1K3H5|I1K3H5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0362000 LjG1.1_chr4 74083089 74087615 +
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100 LjG1.1_chr5 8855212 8878233 -
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100 LjG1.1_chr5 8855442 8878453 -
n.a. Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100 LjG1.1_chr5 8856122 8877755 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G25375.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|Q5XGR8|LACB2_XENLA Endoribonuclease LACTB2; TrEMBL-Plants: tr|K7N2Y2|K7N2Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0337600 LjG1.1_chr5 65494470 65501658 -
n.a. Hydroxyacylglutathione hydrolase; TAIR: AT1G25375.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|Q5XGR8|LACB2_XENLA Endoribonuclease LACTB2; TrEMBL-Plants: tr|K7N2Y2|K7N2Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0337600 LjG1.1_chr5 65494470 65501658 -
n.a. Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr|G7IP30|G7IP30_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi6g1v0313500 LjG1.1_chr6 63155932 63159433 -
n.a. Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr|G7IP30|G7IP30_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi6g1v0313500 LjG1.1_chr6 63155932 63159445 -