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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0151400 |
| Transcript ID | LotjaGi3g1v0151400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B3 domain-containing protein; TAIR: AT4G32010.2 HSI2-like 1; Swiss-Prot: sp|Q6Z3U3|Y7797_ORYSJ B3 domain-containing protein Os07g0679700; TrEMBL-Plants: tr|K7KCN0|K7KCN0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0151400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:20371967..20376375) extracted from Lotus japonicus Gifu genome v1.2.
TTGCAATTAGGGCATTATGCAGAGAATGATGGGCTGAGGTGCTGGCTCAAACCTCATAGTGTTGGTACAGAGGAACCTTC TACAGAAATCAAACCAGAAGTACTGCCCTCTGCTGGAGAACTTGGAAGCACTTTGATATCACAATTTCATCGTGACTCTA ATGGATCATCTAAGCCTGCCAAAGCAGAGAACTGTAAGGCAGACACAGACATGCAAGATATATATGAATCATTAGCACAG ACAAATTTGAGTATGGCGCTTGCTGCTCCTTTAGGAATTTCGAATCCCTTTAATAGTGCTGTTGTTGATGAAAGGGAACT AAGTAAAACATCACCTCCACTTCTATTGGCGTCTAGATCTCGCCATCTTTTACCTAAACCCCCTAGGCAAACTCTTACCC CAGGCTTAGAAGCAAATGCAGGCATGGTGTCCCAGATTCGTATAGCAAGGCCTCCTGCTGAAGGATGGGGAAAGAGTCAG CTGCTTCCGCGTTATTGGCCTCGAATTACAGAACAAGAGTTGCAGCAAATATCGGGAGAGTATCCATCATGCTAACTAGT TCTGTAAATTGTTAATTATTGACTACATTTTTTTCAGGGTGATAAATTTGTTATTATTTTGACCATTACTATTTACCTTA GAAATATATTTCCTTAACCATGATTCATGATACGTTTAAGTTCAAATTCCACCATTGTGCCACTCTTTGAAAAGATGCTT AGTGCAAGTGATGCTGGTCGAATTGGCCGCTTGGTTCTACCAAAAGCATGTGCTGAAGTAATGTTTCTTAACTTCGCTGC TGATCTGAATCTTCTCTTGTCATTTTGTTTTGCCAATAATTCTGCTAGAAGTTATTTTTCTTGATGAGCCTTGTAAATTG TTAGAACTGATAGAAGAGAGTATTGTGCAGGCATATTTCCCTCCTATCTCTCAACCTGAGGGCCTTCCTTTACAAATCCA AGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGTG TAACCCCCTGCATTCAGTCCATGCAACTGCAAGCTGGAGATACTGGTATATTTTACTTAGAACCACTTAATTTGTTCAAC TACCCATTCTAAGAATAGATAAACCACATGGGAATTTTTTTACTTGTCCTTTTGTACTGCTGCAACATTGGCTAAATTTT CTTATATTTTTTCAGCTGTTCTACATATGTATTTTACAAAATCTCTGCAAATTTCTTGCTCATTATGTCAACTAATAAAA AATTATACCTAGAAGAGATGCTGACTTTAGTTACTGAATGCAAATAGTTTTTCTGAAGTCTTTTGTTTTATTTTATGTCT TCTTCTGAAAATGTTTATTAAGTTTGTATAATTTTACTGCTGTTTTATTCTTGTTCTAACTTTAATGCCAACATTATAGA ACTAAAATCAGTCGTGCTTTTGGTGATGAAAAGCAGTTGATAAATGTACCATTTCTAAGTTTCTATTTGCAACTGATTTT TTTTTTTTTTAATATTAGTTTCATCTTCAAATTTGGATAGTAAAAATGTTTATAACTTTTTTCAAAAATGTTGCAGTAAC ATTTAGCCGCATGGAACCTGAGGGGAAACTTATAATGGGTTTCAGGAAGGCAAAAACTTCTGCTGTAGTACAGGTAATAG TCACTTTAGTTCATAAAGCAAACTAAACTATTTGAATTGATATTAATTTCCTATTAAGCAGGAAACACTTCCGTCTAATA TGCCCAATGGTTCTCATTCAAGTGAAACTACCTATTCTGGTGTTTATGAGAATCTACCTATATTAAGTGGTTACTCTGGC CTTCTTCAGTCACAAAAGGGATGTTCAGAAACTCACCTAAACGCATTGTCTAAAAGCTGGAACTCAGCTGGTGGTGACAT GAATTGGCATAATATTGACATGCCCGAAGGCAGGAAAAGAGATGGGTTGCCTGTACCTCCTGTAATGGTTCCTGAGAAGA AAAGAACTCGCAATATTGGGTCAAAAAGTAAGAGGTTACTTTTTGATAGCCAGGATGCACTGGAGCTGCAACTTACTTGG GAAGAGGCTCAGGATTTGCTCCGTCCACCTCCAACAGTTAAGCCAAGCGTTGTCATGATTGAGGATCATGAGTTTGAAGA ATACGACGTAAGTAAACTATTTATGAGAAATTGAAGTGGTTTTCTATGTAATTAACCCATTTAAGTTCTCATCTTTGCTT TTGTGTGTGTCTCTGTGTGTAGCCGTGAGTTAATAGCCTGTTAATAGTCAGTGTGTTTGGTTGATTTTTGGAGTTTGCAA AATCAGTTTTGGGGTTGATAAAAATGACTACGTGTTACACACCATGTATAAGATCTTGTGTAGGAGTTAACTTACTTCAA TCAATGCAGGAACCTCCTGTCTTTGGAAAGAGAAGTATATTTGTAGCACGACCAACTGGGTAAGATGAATGCTTTCTTTA GTTAATTTTCTGTTTATCTTTTTACTGCACGTGTCAGGTTTTCCCCTCCTATTTTCTTTGATATTTTCTATTGAACTTCA TGGTTATACTCACAAACCATACCAATGTAGAAGCTTATTTATTTCAATTGAGTATTTCAATTTGGAGTACAATTGGTCCT CAGGATAAATGAGCAGTGGACACAGTGTGATATTTGCTCAAAATGGCGGAAGCTGCCAGTTGATGTACTTATTCCACCTA AGTGGACATGTGTGGAGAATCAATGGGATCAGAGCAGGTGAGTTGAAGACCCAAACATTACACTGTTATTAACAAAACTT GTTTTTAGCAAGACTTTCATGCTTCTGCAATGCTGTAACAGGTGTTCATGTTCTGCCCCCAATGAATTGAACCCAAGGGA ACTGGATAAGCTTCTGAGACAGAACAAGGGTATTACACCATTCCTTGCATTAAATACTGGTAGAAAACGGTTCCATCTGC AATAGTTTTGCATTACTTATGAAGTTGTGCTTCACATTAGGATCAGATGCTTTCATTTTTTAAAAGAAGAAAACACACAT ACAGAGCTGAAAATTTTAGTGCCTCGAGTATCATTTACATATTTAGTCCATAAGTTAGCATCAGGAGAATTGAAAATCTT CGCAATTGGTATGGAAATTAAGGAAAAAAAGTATGCACCGGATGGTCAATATTATTGAAGTCTTGACTTTTAATATGCAC CTTATATTTCCATCTTTTAACAACTCAATCGATATCATAACTCAAGTAACTAAGATATATACATAATGACTAAAGGCCAT CATAGTACCCTTTTAACTTTCTTAACTATAATTGATGTTGAGCCACCACTTGAAAGAAACTGACTTTTGTGCCAATAAGA TGACAAAAATGTGCGAACAGTAATTATTTATTCTGTGGATTTGCTACCATACTGTTGCTGCCTGTATTAACTAGTTCTGT CTTGCCATATTGTGCTTACCCTTTATAGTCAAATTATGTGTTGAAAGAAATTAACAAATCTGTAAACCCTAATTGTGCTA CATGTTCATGTTGGTGATTTTACGACTATTAGAAATGCATGAAGATATGTTTTTCTTGCCAAAATATTGTGATATCTAAT ATATTTAGATCCGTTACTTTGGAATAGAATTCAAGAAACAGAGACTAGCAGCAAGCCACAGACAAGGCCTAGAACGTGAA TCTTCTGGACTGGATGCTTTGGCAAATGCTGCAGTACTTGGGGATGATGCAAGTGACTCTGGCCGGACACCAGTCACTAC CACTACAAGACACCCCCGGCATAGACCTGGGTGCTCCTGCATTGTCTGTATCCAGCCACCAAGTGGGAAAGGAAAACACA AACCTACATGCACCTGCAACGTGTGCATGACAGTTAAACGCCGGTTTAAAACCTTGATGATGCGAAAGAAGAAGCGCCAA TCTGAGCGTGAAGCAGAGATGGCTCAGAAAAATCAGCTATCTTGGAGGACCAAGGATGAATCAGAGGTAGACAGCACCGT TCAACATTTAACTCCAGTTAACGGTTCAGAGAATGAAACGCGGGTGCCAAATGCGTTGGAATCACGGAGTCAAGACTGCG CGGCTGAAGCTTCCAAGGGGGGGAAATTAGACTTGAATTGCCAACCTGATCGAGAGGACACACAAGCTGGGCCAAACTCA GTGAGCATGATGGGTCTACTTGAAGAAGCAAATCTACCGCTGGAGACATACCTGAAGCAAAACGGTCTTACTAGCTTGAT ATCAGAGCAGCAAACAAACTCAGCTTCAAATGTGCAGGCACAGACAGCCAACGAGAGTGAGGGAAGAAACAATGAGGATT GCAATACTACTTCTGCAGTTCATGACCAGCAAAGCAGTCCTGAAGAGGACAGTGAGCAAGACAAAGACCAAAACAACTCA CTCACATGA
CDS sequence (LotjaGi3g1v0151400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGATATATATGAATCATTAGCACAGACAAATTTGAGTATGGCGCTTGCTGCTCCTTTAGGAATTTCGAATCCCTT TAATAGTGCTGTTGTTGATGAAAGGGAACTAAGTAAAACATCACCTCCACTTCTATTGGCGTCTAGATCTCGCCATCTTT TACCTAAACCCCCTAGGCAAACTCTTACCCCAGGCTTAGAAGCAAATGCAGGCATGGTGTCCCAGATTCGTATAGCAAGG CCTCCTGCTGAAGGATGGGGAAAGAGTCAGCTGCTTCCGCGTTATTGGCCTCGAATTACAGAACAAGAGTTGCAGCAAAT ATCGGGAGATTCAAATTCCACCATTGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGCCGCT TGGTTCTACCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCTGAGGGCCTTCCTTTACAAATCCAAGAT GTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAAC CCCCTGCATTCAGTCCATGCAACTGCAAGCTGGAGATACTGTAACATTTAGCCGCATGGAACCTGAGGGGAAACTTATAA TGGGTTTCAGGAAGGCAAAAACTTCTGCTGTAGTACAGGAAACACTTCCGTCTAATATGCCCAATGGTTCTCATTCAAGT GAAACTACCTATTCTGGTGTTTATGAGAATCTACCTATATTAAGTGGTTACTCTGGCCTTCTTCAGTCACAAAAGGGATG TTCAGAAACTCACCTAAACGCATTGTCTAAAAGCTGGAACTCAGCTGGTGGTGACATGAATTGGCATAATATTGACATGC CCGAAGGCAGGAAAAGAGATGGGTTGCCTGTACCTCCTGTAATGGTTCCTGAGAAGAAAAGAACTCGCAATATTGGGTCA AAAAGTAAGAGGTTACTTTTTGATAGCCAGGATGCACTGGAGCTGCAACTTACTTGGGAAGAGGCTCAGGATTTGCTCCG TCCACCTCCAACAGTTAAGCCAAGCGTTGTCATGATTGAGGATCATGAGTTTGAAGAATACGACGAACCTCCTGTCTTTG GAAAGAGAAGTATATTTGTAGCACGACCAACTGGGATAAATGAGCAGTGGACACAGTGTGATATTTGCTCAAAATGGCGG AAGCTGCCAGTTGATGTACTTATTCCACCTAAGTGGACATGTGTGGAGAATCAATGGGATCAGAGCAGGTGTTCATGTTC TGCCCCCAATGAATTGAACCCAAGGGAACTGGATAAGCTTCTGAGACAGAACAAGGAATTCAAGAAACAGAGACTAGCAG CAAGCCACAGACAAGGCCTAGAACGTGAATCTTCTGGACTGGATGCTTTGGCAAATGCTGCAGTACTTGGGGATGATGCA AGTGACTCTGGCCGGACACCAGTCACTACCACTACAAGACACCCCCGGCATAGACCTGGGTGCTCCTGCATTGTCTGTAT CCAGCCACCAAGTGGGAAAGGAAAACACAAACCTACATGCACCTGCAACGTGTGCATGACAGTTAAACGCCGGTTTAAAA CCTTGATGATGCGAAAGAAGAAGCGCCAATCTGAGCGTGAAGCAGAGATGGCTCAGAAAAATCAGCTATCTTGGAGGACC AAGGATGAATCAGAGGTAGACAGCACCGTTCAACATTTAACTCCAGTTAACGGTTCAGAGAATGAAACGCGGGTGCCAAA TGCGTTGGAATCACGGAGTCAAGACTGCGCGGCTGAAGCTTCCAAGGGGGGGAAATTAGACTTGAATTGCCAACCTGATC GAGAGGACACACAAGCTGGGCCAAACTCAGTGAGCATGATGGGTCTACTTGAAGAAGCAAATCTACCGCTGGAGACATAC CTGAAGCAAAACGGTCTTACTAGCTTGATATCAGAGCAGCAAACAAACTCAGCTTCAAATGTGCAGGCACAGACAGCCAA CGAGAGTGAGGGAAGAAACAATGAGGATTGCAATACTACTTCTGCAGTTCATGACCAGCAAAGCAGTCCTGAAGAGGACA GTGAGCAAGACAAAGACCAAAACAACTCACTCACATGA
Protein sequence (LotjaGi3g1v0151400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQDIYESLAQTNLSMALAAPLGISNPFNSAVVDERELSKTSPPLLLASRSRHLLPKPPRQTLTPGLEANAGMVSQIRIAR PPAEGWGKSQLLPRYWPRITEQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLQIQD VKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMEPEGKLIMGFRKAKTSAVVQETLPSNMPNGSHSS ETTYSGVYENLPILSGYSGLLQSQKGCSETHLNALSKSWNSAGGDMNWHNIDMPEGRKRDGLPVPPVMVPEKKRTRNIGS KSKRLLFDSQDALELQLTWEEAQDLLRPPPTVKPSVVMIEDHEFEEYDEPPVFGKRSIFVARPTGINEQWTQCDICSKWR KLPVDVLIPPKWTCVENQWDQSRCSCSAPNELNPRELDKLLRQNKEFKKQRLAASHRQGLERESSGLDALANAAVLGDDA SDSGRTPVTTTTRHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEMAQKNQLSWRT KDESEVDSTVQHLTPVNGSENETRVPNALESRSQDCAAEASKGGKLDLNCQPDREDTQAGPNSVSMMGLLEEANLPLETY LKQNGLTSLISEQQTNSASNVQAQTANESEGRNNEDCNTTSAVHDQQSSPEEDSEQDKDQNNSLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 687 | 686 | 0.0 | – | |
| PANTHER | 2 | 687 | 686 | 0.0 | – | |
| Gene3D | 107 | 228 | 122 | 5.2E-30 | ||
| SUPERFAMILY | 116 | 218 | 103 | 7.32E-19 | ||
| CDD | 117 | 218 | 102 | 9.49363E-23 | ||
| Pfam | 119 | 218 | 100 | 1.4E-15 | ||
| SMART | 119 | 219 | 101 | 6.0E-20 | ||
| ProSiteProfiles | 119 | 220 | 102 | 11.138 | ||
| Gene3D | 375 | 458 | 84 | 3.6E-13 | – | |
| ProSiteProfiles | 384 | 434 | 51 | 13.392 | ||
| Pfam | 389 | 431 | 43 | 3.6E-9 | ||
| Coils | 437 | 457 | 21 | - | – | |
| MobiDBLite | 478 | 497 | 20 | - | – | |
| MobiDBLite | 539 | 623 | 85 | - | – | |
| MobiDBLite | 569 | 590 | 22 | - | – | |
| MobiDBLite | 652 | 705 | 54 | - | – | |
| MobiDBLite | 652 | 687 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi3g1v0151400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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