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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0151700 |
| Transcript ID | LotjaGi3g1v0151700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 7 long form like; TAIR: AT2G25010.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9SK32|MAIL1_ARATH Protein MAIN-LIKE 1; TrEMBL-Plants: tr|A0A151S0N2|A0A151S0N2_CAJCA Serine/threonine protein phosphatase 7 long form isogeny; Found in the gene: LotjaGi3g1v0151700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:20395693..20399514) extracted from Lotus japonicus Gifu genome v1.2.
ATATAAAGTGACACGTCACCCAATTTTGAAGCTTCTGCGAGAAGCTTTGCCATTACCCTCATCGAGCCATAAGCGTAGTG GAATGTAAGCTGCTCCCGCCGCCGTATCACTTCTCTTCTCCACCGCCGGCGCCGGAAAACAACCCAGTTCCGATGAGAAA ATCCACAAGGTTATCTTCCATTGGTCTCACCCAAGTTCGAGAACCGGTAACACTTCACTTCAATTCCAACAACAACGGAA TTCCACTTTTTAAAATTTCAATTTCTGGTCCCTCAATTTTGCTTTATTTCCAGGTGAAAACTTTCCGGACGCGATTTTCT CTGACTTCCTTCACGAAGCGCGTTCAGCGGCTCACGGCGGAGCAGAGGTCCGCCATCTCGCGAACAGGCTTCGGGAGCTT GCTATCGGTTCCGAATCAAACGCTGAACAAGGTTTTCCTCACGGAGGTGATGGAGGCGTGGGATTCCGAGCGGCGAGTGT TCGCGGTGGGCACAGGTGAGATCTCGATGAGCTTGCTGGATGTTGCGCTGATTCTGGGGGTTCCGGTGGTGGGGGACCCT GTGGTGCTGACGGAGGAGGAGGCGTTTTCTGAAATGGAGGAGGTGTATGGGGCGGCGCGTGGGAAGAGGAAGGTGGCGAT GGGTTCTCTTGAAGCGAGGCTTGATTCAATTGGGGATGTTGTTAGTGATGATTTTGTGAGGACTTTTTTGCTTTACACAA TTGGGACTTTTCTTTCTTCCAATGATGCGAAAGTGGATTCGAGATACTTGAATTTTCTCTGTGATTTGGAGGGTGTTTCT GGATTTGCTTGGGGTGGTGCTGTTGTTGAAGATCTGTGTCAATGGCTGGATAAGAGGAAGCAAAACAATGTGCAGTATGT GGGTGGTTGTCTTGTATTTCTCCAAGTAACTTACTTTCTCTATTTTCATGACTTTTGTTGTTTTAGATTTTTACTTTTGT TTCAAAATTTATGTTGTTTAGAAAATTTATGTCCCTGCATGATAGCTCAAGTGGTAAGAGTTGGGTGACATATGGGTTGG CGAGGGGGAGGTCGAGGGATCAATCTCTGGCGGGTGCAATTTAACTTTCCGATGTACCAAAAAAAAAGAAAATTTCAAGG CTTGTTTAATAGCCCATCCATACTCTCATTTAGTGTGGTTTGATTGTGAAAAGTTGTTAAAGAATAAATGAAATGAGTGA TGGTATAAATAAAGATTTAGTGTTATAGAAACTATGTGGATAACCTTAAACAATAAAAATGATGGAATAGAGGTAATGAT TTTCGTCATGTCCTGACACTTTTGGAATTCTAGTCCTCCAAAATGTTGTTAGATCAATTTAGTACATCAAATGTCTTAGG TGAATTAAATTTGAAGATTGATGTGATCAATTAATGAAAATAGATTCTTATCCATATCAGTTCATTCTTTCAGGTTGTTT GATTTGATAATTTTAATATTTAGATTGATTATATAGTGGTGTGTGCGTTGTCTTGCAAGTAAAGCGCATATAAGGAAGCA ATTTATTCATTGGTTAGAGGACTGTGATCGGTTTTTTGAAAAAAAAAAAAACTTGGTATCTATCAAAAAACCAATTCACA CTCAGAGTGTTCTTGTTTTTATGTTCTAATTTCTTGTTATCTATGGCAAACAGGCATGGTGTTACGAGCATTTTGATATA GCTCGACCACTTTTGCAAGATCTCGATTTGACGTTTCCTCGTGTATGTCGATGGGATAGCAAATCTCACCTAAAGCAACG AGGTACTTCAACGTTTAAGGATCTGCATGATGACCAGGTAACTTGTGTACTAGTTTGTTGAATGTTGTGTTTATTCTTTG TAGTTCTGGCTCCCTGTATAACATGGTAGGTAGAAAAAAGTTAAGTCTTTCTTGACATCTTACCATATTTATAATATATT CCGCCCTTACTTGATGATCTAATGATTGGAAGTATCAAGTCTTTCTTTTTGGACAGAGTCCTTCACGGTTCACTCTGAAT CTGAAGATGATATATTTGGTGTTTGATTTAATAACGGTTGCTTTGGTGTTATGTGTAAAAGGAAAAGTGGATTATAATTC CTTTGTATTTTATTATGGATATGTGTGTCTCAGGTGATTTGGGAACTCCAACCTACTTATGAAGAGCTACAAATAGGGAT AATCAAAGAAGCACTGCAGTTGCAGGGTGACAGCGAAGAGCTTCAAAGGCCAGTAAACTGTTCACCAAGCACATCAACTA ACGTGAGTTATAACTTTTATTTTTATTTTTTAACTCTGTTTTTGGTACATAAACATTTAGGAAGAGGGAAAAGTTGGTCC ATTCCAAGGTCAGGGCATGCGACCCGCAATAGAAAACTTTTTGAGTCAAGTCATTTTCTATTGAACCAAACCTCAGAGGA TAACTAGCAACTTTCTGGTTTTATTGTGGCATTACTGAAGTTTAATTGAATGGGAAGCATTTTATGTTGGCAATGAATTC TTGTAGTTTATTGGAATATATGACCTTTTAAGATGAGTATCTTCTGTTTAAAGTTTAAATATATCAGTCTTCTACAGATT TTCTACTCAGTTCAATGCTGATTAAGAATGTGGTTGTTTGTTCTTGTCTCTCTATTGATTGAGACTTGTACATCGGCAGG TTTCTGGTGTGGATTCTGAGTCACAGCTTAGCATCTCTAATGAAGTACATAGAGAGGATGAGGTTAATTTTGAAAATCAG GTAGTGGAGGACACCCCCACAAGGTTGAGCACCAGTGGTGAAGTTAATAGAGAACAAGAGAACAATTTTGAAAAGCTGAG AGTGGAGGAGACGCCCCCGAATCTGAGCATTGGTGACAAAGTGCATAAAGAGCAGGAAATGAATGGTGAAAAGTTGATAG TGGAGGAGACACTCACAATTTTGAACACTGTTGATGACGTAGGCAGAGAGGAAGAGTTCCATGTTGCAAAACACATAGTG GAGGACACCCCCACAAGTTTGAGCATTGCAGACGAAGTAGGCAAAGAGCAAGAGTTCAGTGCTGAGGATGTCACAGTTGA CAACGCTCCCCCAATATTGAGCTTTTGTGATGTGAGTTTTTGTTTTGTTCTTTGGATCTTGTCATGGGTTACATATCTAT AGTTTCTATCATACAGAAATATCCACAGTTATTTGTCGAACATCATGAAACTTTTTTTATGAACAGGATGATATAAGGAA GAAAAATGTCTTGTTAGAAGAGGAAAATGCTGTGTTGAAGATGAAAATAAGCCAACTAATGATTTCAAATACCCAAGTTG AAGAACAGAACGCTGAGTTGAATAAAGAGCGCGACTTTTTGAGAGAAGAAAACAGAACATTGAGACTTTTAATAAGTGAC TTTGTGGCCCGAATGGATAGACATGATTTGGATCTCGAAACAAATGCAATTGAATTGCACCCTGAAACTTCCTAGCTGTT TAGAGATAGAGTTGTGGCAAACAAACCATCCGATACATGGTCACTTTTGGTCTAGCTGCAGCCTCCACATTGATAATTTC TGCTCTCCCGACAGGCATAGAATTTTGGGCTGCTAAGTGTATATATTTGGTGTAACTTGTAAGGTAAATAAACTATCAGT TTATTTGTGGGTTGTTTTAGGAGGTTTCTTTAAAGCAAAAACATGATATTTGCGCTAGGTAGACAGATTGTTTATGTACT TCTCCAAACACAAGTATTTGGAGTCCTGTAATATGTACAAGTTCTTTTCATGATCATTGATCATCATGAGGCTTTGCAAA GAGCCACTAGAAACTTTGCATTATTCTTTCCTTTTTATCAGTACGTTGATCTAACTACTGGC
CDS sequence (LotjaGi3g1v0151700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAAAATCCACAAGGTTATCTTCCATTGGTCTCACCCAAGTTCGAGAACCGGTAACACTTCACTTCAATTCCAACAA CAACGGAATTCCACTTTTTAAAATTTCAATTTCTGGTCCCTCAATTTTGCTTTATTTCCAGGTGAAAACTTTCCGGACGC GATTTTCTCTGACTTCCTTCACGAAGCGCGTTCAGCGGCTCACGGCGGAGCAGAGGTCCGCCATCTCGCGAACAGGCTTC GGGAGCTTGCTATCGGTTCCGAATCAAACGCTGAACAAGGTTTTCCTCACGGAGGTGATGGAGGCGTGGGATTCCGAGCG GCGAGTGTTCGCGGTGGGCACAGGTGAGATCTCGATGAGCTTGCTGGATGTTGCGCTGATTCTGGGGGTTCCGGTGGTGG GGGACCCTGTGGTGCTGACGGAGGAGGAGGCGTTTTCTGAAATGGAGGAGGTGTATGGGGCGGCGCGTGGGAAGAGGAAG GTGGCGATGGGTTCTCTTGAAGCGAGGCTTGATTCAATTGGGGATGTTGTTAGTGATGATTTTGTGAGGACTTTTTTGCT TTACACAATTGGGACTTTTCTTTCTTCCAATGATGCGAAAGTGGATTCGAGATACTTGAATTTTCTCTGTGATTTGGAGG GTGTTTCTGGATTTGCTTGGGGTGGTGCTGTTGTTGAAGATCTGTGTCAATGGCTGGATAAGAGGAAGCAAAACAATGTG CAGTATGTGGGTGGTTGTCTTGTATTTCTCCAAGCATGGTGTTACGAGCATTTTGATATAGCTCGACCACTTTTGCAAGA TCTCGATTTGACGTTTCCTCGTGTATGTCGATGGGATAGCAAATCTCACCTAAAGCAACGAGGTACTTCAACGTTTAAGG ATCTGCATGATGACCAGGTAACTTGTGTACTAGTTTGTTGA
Protein sequence (LotjaGi3g1v0151700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKSTRLSSIGLTQVREPVTLHFNSNNNGIPLFKISISGPSILLYFQVKTFRTRFSLTSFTKRVQRLTAEQRSAISRTGF GSLLSVPNQTLNKVFLTEVMEAWDSERRVFAVGTGEISMSLLDVALILGVPVVGDPVVLTEEEAFSEMEEVYGAARGKRK VAMGSLEARLDSIGDVVSDDFVRTFLLYTIGTFLSSNDAKVDSRYLNFLCDLEGVSGFAWGGAVVEDLCQWLDKRKQNNV QYVGGCLVFLQAWCYEHFDIARPLLQDLDLTFPRVCRWDSKSHLKQRGTSTFKDLHDDQVTCVLVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 302 | 302 | 2.0E-107 | – | |
| PANTHER | 1 | 302 | 302 | 2.0E-107 | – | |
| Pfam | 90 | 298 | 209 | 7.9E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0151700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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