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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0151700 |
| Transcript ID | LotjaGi3g1v0151700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 7 long form like; TAIR: AT2G25010.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9SK32|MAIL1_ARATH Protein MAIN-LIKE 1; TrEMBL-Plants: tr|V7AR69|V7AR69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0151700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:20395784..20399458) extracted from Lotus japonicus Gifu genome v1.2.
GCTCCCGCCGCCGTATCACTTCTCTTCTCCACCGCCGGCGCCGGAAAACAACCCAGTTCCGATGAGAAAATCCACAAGGT TATCTTCCATTGGTCTCACCCAAGTTCGAGAACCGGTAACACTTCACTTCAATTCCAACAACAACGGAATTCCACTTTTT AAAATTTCAATTTCTGGTCCCTCAATTTTGCTTTATTTCCAGGTGAAAACTTTCCGGACGCGATTTTCTCTGACTTCCTT CACGAAGCGCGTTCAGCGGCTCACGGCGGAGCAGAGGTCCGCCATCTCGCGAACAGGCTTCGGGAGCTTGCTATCGGTTC CGAATCAAACGCTGAACAAGGTTTTCCTCACGGAGGTGATGGAGGCGTGGGATTCCGAGCGGCGAGTGTTCGCGGTGGGC ACAGGTGAGATCTCGATGAGCTTGCTGGATGTTGCGCTGATTCTGGGGGTTCCGGTGGTGGGGGACCCTGTGGTGCTGAC GGAGGAGGAGGCGTTTTCTGAAATGGAGGAGGTGTATGGGGCGGCGCGTGGGAAGAGGAAGGTGGCGATGGGTTCTCTTG AAGCGAGGCTTGATTCAATTGGGGATGTTGTTAGTGATGATTTTGTGAGGACTTTTTTGCTTTACACAATTGGGACTTTT CTTTCTTCCAATGATGCGAAAGTGGATTCGAGATACTTGAATTTTCTCTGTGATTTGGAGGGTGTTTCTGGATTTGCTTG GGGTGGTGCTGTTGTTGAAGATCTGTGTCAATGGCTGGATAAGAGGAAGCAAAACAATGTGCAGTATGTGGGTGGTTGTC TTGTATTTCTCCAAGTAACTTACTTTCTCTATTTTCATGACTTTTGTTGTTTTAGATTTTTACTTTTGTTTCAAAATTTA TGTTGTTTAGAAAATTTATGTCCCTGCATGATAGCTCAAGTGGTAAGAGTTGGGTGACATATGGGTTGGCGAGGGGGAGG TCGAGGGATCAATCTCTGGCGGGTGCAATTTAACTTTCCGATGTACCAAAAAAAAAGAAAATTTCAAGGCTTGTTTAATA GCCCATCCATACTCTCATTTAGTGTGGTTTGATTGTGAAAAGTTGTTAAAGAATAAATGAAATGAGTGATGGTATAAATA AAGATTTAGTGTTATAGAAACTATGTGGATAACCTTAAACAATAAAAATGATGGAATAGAGGTAATGATTTTCGTCATGT CCTGACACTTTTGGAATTCTAGTCCTCCAAAATGTTGTTAGATCAATTTAGTACATCAAATGTCTTAGGTGAATTAAATT TGAAGATTGATGTGATCAATTAATGAAAATAGATTCTTATCCATATCAGTTCATTCTTTCAGGTTGTTTGATTTGATAAT TTTAATATTTAGATTGATTATATAGTGGTGTGTGCGTTGTCTTGCAAGTAAAGCGCATATAAGGAAGCAATTTATTCATT GGTTAGAGGACTGTGATCGGTTTTTTGAAAAAAAAAAAAACTTGGTATCTATCAAAAAACCAATTCACACTCAGAGTGTT CTTGTTTTTATGTTCTAATTTCTTGTTATCTATGGCAAACAGGCATGGTGTTACGAGCATTTTGATATAGCTCGACCACT TTTGCAAGATCTCGATTTGACGTTTCCTCGTGTATGTCGATGGGATAGCAAATCTCACCTAAAGCAACGAGGTACTTCAA CGTTTAAGGATCTGCATGATGACCAGGTAACTTGTGTACTAGTTTGTTGAATGTTGTGTTTATTCTTTGTAGTTCTGGCT CCCTGTATAACATGGTAGGTAGAAAAAAGTTAAGTCTTTCTTGACATCTTACCATATTTATAATATATTCCGCCCTTACT TGATGATCTAATGATTGGAAGTATCAAGTCTTTCTTTTTGGACAGAGTCCTTCACGGTTCACTCTGAATCTGAAGATGAT ATATTTGGTGTTTGATTTAATAACGGTTGCTTTGGTGTTATGTGTAAAAGGAAAAGTGGATTATAATTCCTTTGTATTTT ATTATGGATATGTGTGTCTCAGGTGATTTGGGAACTCCAACCTACTTATGAAGAGCTACAAATAGGGATAATCAAAGAAG CACTGCAGTTGCAGGGTGACAGCGAAGAGCTTCAAAGGCCAGTAAACTGTTCACCAAGCACATCAACTAACGTGAGTTAT AACTTTTATTTTTATTTTTTAACTCTGTTTTTGGTACATAAACATTTAGGAAGAGGGAAAAGTTGGTCCATTCCAAGGTC AGGGCATGCGACCCGCAATAGAAAACTTTTTGAGTCAAGTCATTTTCTATTGAACCAAACCTCAGAGGATAACTAGCAAC TTTCTGGTTTTATTGTGGCATTACTGAAGTTTAATTGAATGGGAAGCATTTTATGTTGGCAATGAATTCTTGTAGTTTAT TGGAATATATGACCTTTTAAGATGAGTATCTTCTGTTTAAAGTTTAAATATATCAGTCTTCTACAGATTTTCTACTCAGT TCAATGCTGATTAAGAATGTGGTTGTTTGTTCTTGTCTCTCTATTGATTGAGACTTGTACATCGGCAGGTTTCTGGTGTG GATTCTGAGTCACAGCTTAGCATCTCTAATGAAGTACATAGAGAGGATGAGGTTAATTTTGAAAATCAGGTAGTGGAGGA CACCCCCACAAGGTTGAGCACCAGTGGTGAAGTTAATAGAGAACAAGAGAACAATTTTGAAAAGCTGAGAGTGGAGGAGA CGCCCCCGAATCTGAGCATTGGTGACAAAGTGCATAAAGAGCAGGAAATGAATGGTGAAAAGTTGATAGTGGAGGAGACA CTCACAATTTTGAACACTGTTGATGACGTAGGCAGAGAGGAAGAGTTCCATGTTGCAAAACACATAGTGGAGGACACCCC CACAAGTTTGAGCATTGCAGACGAAGTAGGCAAAGAGCAAGAGTTCAGTGCTGAGGATGTCACAGTTGACAACGCTCCCC CAATATTGAGCTTTTGTGATGTGAGTTTTTGTTTTGTTCTTTGGATCTTGTCATGGGTTACATATCTATAGTTTCTATCA TACAGAAATATCCACAGTTATTTGTCGAACATCATGAAACTTTTTTTATGAACAGGATGATATAAGGAAGAAAAATGTCT TGTTAGAAGAGGAAAATGCTGTGTTGAAGATGAAAATAAGCCAACTAATGATTTCAAATACCCAAGTTGAAGAACAGAAC GCTGAGTTGAATAAAGAGCGCGACTTTTTGAGAGAAGAAAACAGAACATTGAGACTTTTAATAAGTGACTTTGTGGCCCG AATGGATAGACATGATTTGGATCTCGAAACAAATGCAATTGAATTGCACCCTGAAACTTCCTAGCTGTTTAGAGATAGAG TTGTGGCAAACAAACCATCCGATACATGGTCACTTTTGGTCTAGCTGCAGCCTCCACATTGATAATTTCTGCTCTCCCGA CAGGCATAGAATTTTGGGCTGCTAAGTGTATATATTTGGTGTAACTTGTAAGGTAAATAAACTATCAGTTTATTTGTGGG TTGTTTTAGGAGGTTTCTTTAAAGCAAAAACATGATATTTGCGCTAGGTAGACAGATTGTTTATGTACTTCTCCAAACAC AAGTATTTGGAGTCCTGTAATATGTACAAGTTCTTTTCATGATCATTGATCATCATGAGGCTTTGCAAAGAGCCA
CDS sequence (LotjaGi3g1v0151700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAAAATCCACAAGGTTATCTTCCATTGGTCTCACCCAAGTTCGAGAACCGGTAACACTTCACTTCAATTCCAACAA CAACGGAATTCCACTTTTTAAAATTTCAATTTCTGGTCCCTCAATTTTGCTTTATTTCCAGGTGAAAACTTTCCGGACGC GATTTTCTCTGACTTCCTTCACGAAGCGCGTTCAGCGGCTCACGGCGGAGCAGAGGTCCGCCATCTCGCGAACAGGCTTC GGGAGCTTGCTATCGGTTCCGAATCAAACGCTGAACAAGGTTTTCCTCACGGAGGTGATGGAGGCGTGGGATTCCGAGCG GCGAGTGTTCGCGGTGGGCACAGGTGAGATCTCGATGAGCTTGCTGGATGTTGCGCTGATTCTGGGGGTTCCGGTGGTGG GGGACCCTGTGGTGCTGACGGAGGAGGAGGCGTTTTCTGAAATGGAGGAGGTGTATGGGGCGGCGCGTGGGAAGAGGAAG GTGGCGATGGGTTCTCTTGAAGCGAGGCTTGATTCAATTGGGGATGTTGTTAGTGATGATTTTGTGAGGACTTTTTTGCT TTACACAATTGGGACTTTTCTTTCTTCCAATGATGCGAAAGTGGATTCGAGATACTTGAATTTTCTCTGTGATTTGGAGG GTGTTTCTGGATTTGCTTGGGGTGGTGCTGTTGTTGAAGATCTGTGTCAATGGCTGGATAAGAGGAAGCAAAACAATGTG CAGTATGTGGGTGGTTGTCTTGTATTTCTCCAAGCATGGTGTTACGAGCATTTTGATATAGCTCGACCACTTTTGCAAGA TCTCGATTTGACGTTTCCTCGTGTATGTCGATGGGATAGCAAATCTCACCTAAAGCAACGAGGTACTTCAACGTTTAAGG ATCTGCATGATGACCAGGTGATTTGGGAACTCCAACCTACTTATGAAGAGCTACAAATAGGGATAATCAAAGAAGCACTG CAGTTGCAGGGTGACAGCGAAGAGCTTCAAAGGCCAGTAAACTGTTCACCAAGCACATCAACTAACGTTTCTGGTGTGGA TTCTGAGTCACAGCTTAGCATCTCTAATGAAGTACATAGAGAGGATGAGGTTAATTTTGAAAATCAGGTAGTGGAGGACA CCCCCACAAGGTTGAGCACCAGTGGTGAAGTTAATAGAGAACAAGAGAACAATTTTGAAAAGCTGAGAGTGGAGGAGACG CCCCCGAATCTGAGCATTGGTGACAAAGTGCATAAAGAGCAGGAAATGAATGGTGAAAAGTTGATAGTGGAGGAGACACT CACAATTTTGAACACTGTTGATGACGTAGGCAGAGAGGAAGAGTTCCATGTTGCAAAACACATAGTGGAGGACACCCCCA CAAGTTTGAGCATTGCAGACGAAGTAGGCAAAGAGCAAGAGTTCAGTGCTGAGGATGTCACAGTTGACAACGCTCCCCCA ATATTGAGCTTTTGTGATGATGATATAAGGAAGAAAAATGTCTTGTTAGAAGAGGAAAATGCTGTGTTGAAGATGAAAAT AAGCCAACTAATGATTTCAAATACCCAAGTTGAAGAACAGAACGCTGAGTTGAATAAAGAGCGCGACTTTTTGAGAGAAG AAAACAGAACATTGAGACTTTTAATAAGTGACTTTGTGGCCCGAATGGATAGACATGATTTGGATCTCGAAACAAATGCA ATTGAATTGCACCCTGAAACTTCCTAG
Protein sequence (LotjaGi3g1v0151700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKSTRLSSIGLTQVREPVTLHFNSNNNGIPLFKISISGPSILLYFQVKTFRTRFSLTSFTKRVQRLTAEQRSAISRTGF GSLLSVPNQTLNKVFLTEVMEAWDSERRVFAVGTGEISMSLLDVALILGVPVVGDPVVLTEEEAFSEMEEVYGAARGKRK VAMGSLEARLDSIGDVVSDDFVRTFLLYTIGTFLSSNDAKVDSRYLNFLCDLEGVSGFAWGGAVVEDLCQWLDKRKQNNV QYVGGCLVFLQAWCYEHFDIARPLLQDLDLTFPRVCRWDSKSHLKQRGTSTFKDLHDDQVIWELQPTYEELQIGIIKEAL QLQGDSEELQRPVNCSPSTSTNVSGVDSESQLSISNEVHREDEVNFENQVVEDTPTRLSTSGEVNREQENNFEKLRVEET PPNLSIGDKVHKEQEMNGEKLIVEETLTILNTVDDVGREEEFHVAKHIVEDTPTSLSIADEVGKEQEFSAEDVTVDNAPP ILSFCDDDIRKKNVLLEEENAVLKMKISQLMISNTQVEEQNAELNKERDFLREENRTLRLLISDFVARMDRHDLDLETNA IELHPETS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 550 | 550 | 1.6E-133 | – | |
| PANTHER | 1 | 550 | 550 | 1.6E-133 | – | |
| Pfam | 90 | 303 | 214 | 7.3E-27 | ||
| Coils | 507 | 541 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0151700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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