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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0155900 |
| Transcript ID | LotjaGi3g1v0155900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein yippee-like; TAIR: AT5G53940.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9FN32|YIPL7_ARATH Protein yippee-like At5g53940; TrEMBL-Plants: tr|I1M353|I1M353_SOYBN Protein yippee-like; Found in the gene: LotjaGi3g1v0155900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:21282604..21287688) extracted from Lotus japonicus Gifu genome v1.2.
CTTCTTTGTTACGGCGTTTTTTTTCTTCCAATTAACAGATCTTTCATAACTATCGTTAGAAGAAAAATAAGTAAAAATAA GTAAATAGTGGGGCATTGGGCATCCTATGCTAATTACACGTGTCCAGTGTCCTGTCCCTTTTACCAGCAAGCAATTCTTG CTGCTATTGCTGTATCTCCTCTCTATCTACCGCTGAATCATCATAACTTCCATTTTTGAGCTAAGTGACTCTGCTGTGGG AAGTTAGGGAGTCTCCATCAAAAACCAATACTAGTTAATCAGAGAGAACATGGGAAGAATCTTTGCAGTGGAGCTGGAGG GCAGGTCCTACAGATGCAGGTTCTGCAGAACTCACTTGGCTCTTGCAGAAGATCTCATCTCTAAGGTACCAACAAATTAA TGCTTTTTTTCTCCTGTCATAGTTTTTTAGCTAAGAATTATTTTTCTGGTTTTTCTATGTTGCTGCTGTTGGAGCACTTG TTTGTGAAGTTATCCTTGAACCAATGCAAGCATCAGAAACAGCCTCTAAGGTCATAAGTTTTATGTTTTGGGAGAAAAGT GAAATAGTGAATCCTTTAATAGACATTTTCATATGTTAAAACATGTAATTAATATATATGTGTACATATCTACTTTGAGG TCATGGAGATTTGAGAACTATGTGCTGGAAGATAAAAAAACAAAAATGTGTATTTTGGGGTTTCTTTTATACATATATAA CTTGCTAGAGGATCAAAATTCAAATGATCAGATTCATAAGTAAGCTGTTAATGTGAAAATCCTGTAAGGTGTTGGCAACC ATTTGATTTGCCAGTTAGATAACAGAGCTGATGCAATTTTAAAACCAATCAATGGCAACAGCTGCTTCTTCAGTTTTTGG GTATTATGATTTGTTTGTCCTTAAGACCATTGCCACTAGAAGCATTATACAGGCCTTATTATTATCTTTCTTGCACTACC TGAAAAGTATGTAGTATGTACACTTCTCAGAACTCTAGGGTTTTAGTAGCTCTACCATATTTATGATCTTTGTTGCCTTT ACCTAGTGTTGTGTTCCTTCATAAGCATTACCATCTGCATCCCCTATATGCACAGAAGAATATAGAAGAATGTCAAACTT CTACTGGTTCATCTGATATAAAATAAAGGCTTATAAATAAATCCTGAAGCTATAATAAAAACCTATGGATTGAGTGGGAT AGTATAGCATAGTCACTCTTCTATTCTTATATCTTAGTGCGTGTTTGGTTCAGCATTGTCAAAATTGATTTTGGTAAAGT CGATTATGGTAAATAGGAGTTAAGTGAGTTAAAAAAGTGAAGTGATTTATGTTTGGATATGTTTATGGGTTACTTTTGTA AGGTAATGTTAGGAAATCTAGATATGAAACCCCACAATGATTATGTATGGAGAAGGTACTCTCTCTAGCTTTTTCGCATA ATTGATTTTGGGACTAAAATCAATTCTTTTAGTCGGTTGTGAAACATCTATGACAACCTTAAAGTGATTATGGTTAATGA GAACTGATTCTAAGGCTCCAAAATGTGGAAGCATTAAGGATTTCTAATTGCTCTAGTGGAAAAATCTTAATAAAAAACCC TGGGGATTAATTAGACACTGGTTGATCTTCCATTAATGCTTTCCTTTGCTTTGTAAAGTACTCTAAGGGATATCCGTCCT CATTAAGAGTTTAGGAATTAATTATCTTTCGGCTATTGCATTCTGTCAAGCTATAGCCAAAGGAATATGTGAGAGGTTCA TATGAAAAAGCTTCGACATGAACATACAGTGTGATGTTTGGACTCTTGACTATCTTCTTCCGTGGTTGCTTTTAATACAT TCACTACTTTATATATTAAAAGTCAAGTATTTTAACAAAGTAAACATTTAGCTGACATATCAAATGTGTACGGTGGGAAA GATAAAATGCTTATTGTATCACTTCTAATGATATGCTTAATATCTTTGCTGTTGAAATTGCTTGGTTTTTGCCAGTTTAG TGCTCTAAATTTCCATCTGCTCACTGGATTGTTAAACTACTTCTCATCTTAATCTTCTATTACCTTTCTTTCAGGCATTT CATTGTCGAAGAGGGAAAGCATACCTATTCAATAATGCGTGAGTACATTTCAGTTCCTATTTATAAGCCAGTATGAGAAA TTAAAATTCATGATAGTGACTTATTGTAACATGTAACAGGCTGCTGCCTCATGTTATATTCATATTGCTATTGGTGGCTG GAAACTTAATGTATCTTCATTTCATGCTAGTAACAATCTGGAAATATTGTGGTTGTGTTGTGAAAAGGCCAAACCTCTAT GAAAGTTATATGCGATCATACATCATGAGTTCTGAGTTTTCTCATTGTTCATGTTAGAATATGATATAAAACCATTCATG TGGCCCTTACCCAATAGCTTAAGCTTTTGGGATAATTGGTTGCTTGACATGGAATCAGAGCCTTTATGACCAAATGGTCT AGAGTTCGATACTTGCCGCCCTCAATTCTTCTGATAAAAAAGTTGAATTTAAGCACATGGTAGGTGGACATGTTGGTCTT GAAGCGTGGACAATGCAAAGGCCCGCCTACCATGTGTCAAAATTGAACTTTTTATTAGAAGAATTGGGGGCGACAAAGAT CGAATTCTAGACCGTTTGGTCATAGAGGCTCTGATACCATATCAAGCAACCAATTATTCTAAAAGCTTAAGCTGTTAGTA ACATGAATGGTTTTATATTATTATTTGTAACACCACTCATATAGAATTTTGATTCCTCATCTGCATTCATGAGTCTGTTT TGATTGGAGTTTGAGTGCATCCGTCCGTGTATGACCCATGTTACAACATATCATCTGGGTGATTACACCAGATCCAGCTA TAATTAAGTTAATCTTTGTTTGAAATAATTGTTGATGACAATTTTTAACCCGAATAGTTTAACAATTTGATCTTTTCCAG CATCAGTAGTTGTTGCCCCTCTTGTCTTCACATCTGAATTGACATAGTTGAGAACAAAAATGATAATTCAACAATTTCTT CTTTTTGTTTTGGCCCTAATAAATCTCCTGATTTCCTTCTGACAGTACTGCTTTCTGTTCAACTTTTTCTTAGTAGACCC TGATGCTAGATTTATTTACTGTGACCTGCCTAAGGAACGAGTTAGTGTGTTCACACTTCACAATGATCACCATCCAGATC TAGCCTAATGGTTTCTATATTATCGGTGCAAGTTTGACATTTGAATTTTCCCAAATAACTAATGGGCTGGTTTAAACTTG CAGTTTTTCAAGAGTTTTATAGCAGATATGGTGCAGTGATATACTATGTGCTGCATCTAGCCATGGCCTGAAATATAGCA TATTTGTGGATTTCATTAAGAAATTGTTTGATTAGTAGGTCTTTGCCTTTAGCAACTCCTTTATTTTAAAATCACTATTT GTTTCTTCCCATTTAAAAAGTTCATGCTTCCCTTGTTAATTTGATGTTATTAGCAATTTAGCATGTTAAGAAATGAGCAT ATTAGGACAAAATTACTAAATTAATTGTGTTTACACCCTTTTGTTAAGGTTTTTACCAGCCATATAGCTTCTATTATGAA TGTAATTTACGTTAACTTTCAACCCCAAATTCTGACCTTTTTTTATTCATCTTCTAATTTACATATACATGTACCATTGG AATTCCGGCACAATTTAAAATTTAGTGCAACGACCATGTCTAAAAGGAGACCAAAGCTGCTTTGTAATGACTGCTCTTTG TGCATCAAAACTTGTAACATGATGTCCATGTGCTACTGACTCTGGTATCTGATAAACTGAAACTAAAAAGAAGCAAAGCA TCAATAAGTTTGAGACCGCCTTTGCATCTAGCCCTTAGGAAGTCATGGTTTGAGATCACGTTCATAGACTTGTGATTTTC ACATAAAGTAAATATAAGTTTGGGAATTGCTTAGTTCCTGTAATTTTTAGTTGGTAATATCACTACATGTTCTGAAAATT CTGTACTCTTGGGACTGCGTATGTTTCGGGCCTGTGATTCAGGGTGAACATCACAATTGGAGCACCTGAAGTAAGGATGA TGCTTTCCGGCTTGCATACCGTGGCAGATATTTTTTGCTGTTGCTGTGGTCAAATCGTTGGCTGGAAATATGTAATCCTC CTCTCTTACTCTGCCTGGATTTTATGTCTCTGGAAACAATGTTGCAGATGAAATTCCTTAGAATATCTATGCTGGATGAG TGGTCCAAAATTAACCCTCATTCTTTAGTTCAGGTTAATTAGCTGCCAACTTGCCATGCACCCTCTGATCATTTGAAAAT TTGCTATTCTGTCACAGGAATCTGCACATGAGAAGACCCAAAAGTATAAAGAAGGGAAGTTTGTTCTTGAAAGGTATTAG CTTCATATCATGTTGTCACCTATCTTGGTTAATTTAGTTGCATTTTTTTTACATTATGGTGTTTATATTGATGATTATGC ATGCCCTACTTGTCAATCCAACAGAGGAAGGATTGTTGATGATGTTGATTTCAATGCTGAATTCTATATTGATAGTCGTG CCAGCATGAGCGATGCCGAAGATGCTTAGCATCTTAAACAAACTTACTGGATTTCTTTATTGACTTGCTGGATCAGGAGA AGGAATCTTGACTGCTTTTGTATATGAAGTATGAACAATAACAGTGGTGACCCATGAAAATGCTTCAGATGAAGAAAGTT TCTCTTGAGTTTTAATTTTTTATTTGAAATTTATATATCCATGATGTGTATACTGTATGGCGTGTTATCGGATGAGGAGG GTATGAATTAGTCCAGGAAGTACATGCAAAATAACTGTTCTAAGTTCTAACGCTCAAGTCAGAGAGAAGCCTTATATGTG AAAAATGCGTACATTTTTTGAGGCCTCGCCTCTATTTGTAAAGGTGGAAGTTTGGCTCAAATTCCTTGAAATCTAGAGTT CGATTAGGAGTGCTAATACTCCAAAACCACTCGAAGGAACTATGACCTAGTCTTCATGACCATACTAGATCAAATTAATA GGTAAAGAAGGTCGAGACTTTTATAAAAAGCCTTGGAAACGTAAG
CDS sequence (LotjaGi3g1v0155900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGAATCTTTGCAGTGGAGCTGGAGGGCAGGTCCTACAGATGCAGGTTCTGCAGAACTCACTTGGCTCTTGCAGA AGATCTCATCTCTAAGGCATTTCATTGTCGAAGAGGGAAAGCATACCTATTCAATAATGCGGTGAACATCACAATTGGAG CACCTGAAGTAAGGATGATGCTTTCCGGCTTGCATACCGTGGCAGATATTTTTTGCTGTTGCTGTGGTCAAATCGTTGGC TGGAAATATGAATCTGCACATGAGAAGACCCAAAAGTATAAAGAAGGGAAGTTTGTTCTTGAAAGAGGAAGGATTGTTGA TGATGTTGATTTCAATGCTGAATTCTATATTGATAGTCGTGCCAGCATGAGCGATGCCGAAGATGCTTAG
Protein sequence (LotjaGi3g1v0155900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRIFAVELEGRSYRCRFCRTHLALAEDLISKAFHCRRGKAYLFNNAVNITIGAPEVRMMLSGLHTVADIFCCCCGQIVG WKYESAHEKTQKYKEGKFVLERGRIVDDVDFNAEFYIDSRASMSDAEDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 129 | 129 | 1.2E-75 | – | |
| PANTHER | 1 | 129 | 129 | 1.2E-75 | ||
| ProSiteProfiles | 12 | 109 | 98 | 48.785 | ||
| Pfam | 14 | 105 | 92 | 1.0E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0155900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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