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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039058
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.524s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0078000.1
n.a. Protein yippee-like; TAIR: AT2G40110.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|P59234|YIPL_SOLTU Protein yippee-like; TrEMBL-Plants: tr|V4SME6|V4SME6_9ROSI Protein yippee-like; Found in the gene: LotjaGi1g1v0078000 LjG1.1_chr1 11298290 11302023 +
2 domain predictions
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LotjaGi1g1v0078000.2
n.a. Protein yippee-like; TAIR: AT2G40110.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|P59234|YIPL_SOLTU Protein yippee-like; TrEMBL-Plants: tr|V4SME6|V4SME6_9ROSI Protein yippee-like; Found in the gene: LotjaGi1g1v0078000 LjG1.1_chr1 11298453 11301372 +
2 domain predictions
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LotjaGi1g1v0143700.1
n.a. Protein yippee-like; TAIR: AT3G11230.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9C777|YIPL3_ARATH Protein yippee-like At3g11230; TrEMBL-Plants: tr|A0A151T905|A0A151T905_CAJCA Protein yippee-like; Found in the gene: LotjaGi1g1v0143700 LjG1.1_chr1 23861616 23865047 +
2 domain predictions
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LotjaGi1g1v0143700.2
n.a. Protein yippee-like; TAIR: AT3G11230.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9C777|YIPL3_ARATH Protein yippee-like At3g11230; TrEMBL-Plants: tr|A0A151T905|A0A151T905_CAJCA Protein yippee-like; Found in the gene: LotjaGi1g1v0143700 LjG1.1_chr1 23861696 23864953 +
2 domain predictions
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LotjaGi1g1v0290300.1
n.a. Protein yippee-like; TAIR: AT4G27745.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9T096|YIPL6_ARATH Protein yippee-like At4g27745; TrEMBL-Plants: tr|I3SRT1|I3SRT1_LOTJA Protein yippee-like; Found in the gene: LotjaGi1g1v0290300 LjG1.1_chr1 70571176 70574637 -
2 domain predictions
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LotjaGi1g1v0440000_LC.1
n.a. Protein yippee-like; TAIR: AT3G11230.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|P59234|YIPL_SOLTU Protein yippee-like; TrEMBL-Plants: tr|A0A151T905|A0A151T905_CAJCA Protein yippee-like; Found in the gene: LotjaGi1g1v0440000_LC LjG1.1_chr1 93602864 93606655 -
2 domain predictions
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LotjaGi3g1v0045500.1
n.a. Protein yippee-like; TAIR: AT5G53940.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9FN32|YIPL7_ARATH Protein yippee-like At5g53940; TrEMBL-Plants: tr|I3S5P8|I3S5P8_LOTJA Protein yippee-like; Found in the gene: LotjaGi3g1v0045500 LjG1.1_chr3 4862561 4866501 +
2 domain predictions
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LotjaGi3g1v0155900.1
n.a. Protein yippee-like; TAIR: AT5G53940.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9FN32|YIPL7_ARATH Protein yippee-like At5g53940; TrEMBL-Plants: tr|I1M353|I1M353_SOYBN Protein yippee-like; Found in the gene: LotjaGi3g1v0155900 LjG1.1_chr3 21282604 21287688 -
2 domain predictions
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LotjaGi3g1v0260900.1
n.a. Protein yippee-like; TAIR: AT4G27740.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q2V3E2|YIPL5_ARATH Protein yippee-like At4g27740; TrEMBL-Plants: tr|A0A1J7FQU4|A0A1J7FQU4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0260900 LjG1.1_chr3 47663486 47665101 -
2 domain predictions
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LotjaGi3g1v0398900.1
n.a. Protein yippee-like; TAIR: AT4G27745.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9T096|YIPL6_ARATH Protein yippee-like At4g27745; TrEMBL-Plants: tr|K7KZT1|K7KZT1_SOYBN Protein yippee-like; Found in the gene: LotjaGi3g1v0398900 LjG1.1_chr3 80073389 80077614 +
2 domain predictions
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LotjaGi5g1v0199600.1
n.a. Protein yippee-like; TAIR: AT4G27745.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9T096|YIPL6_ARATH Protein yippee-like At4g27745; TrEMBL-Plants: tr|W9QPR5|W9QPR5_9ROSA Protein yippee-like; Found in the gene: LotjaGi5g1v0199600 LjG1.1_chr5 49748138 49750330 -
2 domain predictions
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LotjaGi5g1v0199600.2
n.a. Protein yippee-like; TAIR: AT4G27745.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9T096|YIPL6_ARATH Protein yippee-like At4g27745; TrEMBL-Plants: tr|W9QPR5|W9QPR5_9ROSA Protein yippee-like; Found in the gene: LotjaGi5g1v0199600 LjG1.1_chr5 49748522 49749513 -
2 domain predictions
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LotjaGi6g1v0072500.1
n.a. Protein yippee-like; TAIR: AT2G40110.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|P59234|YIPL_SOLTU Protein yippee-like; TrEMBL-Plants: tr|I3SXJ4|I3SXJ4_LOTJA Protein yippee-like; Found in the gene: LotjaGi6g1v0072500 LjG1.1_chr6 13797331 13800540 -
2 domain predictions
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