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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0156400 |
| Transcript ID | LotjaGi3g1v0156400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/Threonine-kinase WNK (WNK)-like protein; TAIR: AT5G53900.2 Serine/threonine-protein kinase WNK (With No Lysine)-like protein; Swiss-Prot: sp|Q58G01|LHWL3_ARATH Transcription factor bHLH155; TrEMBL-Plants: tr|I1M358|I1M358_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0156400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:21376036..21379476) extracted from Lotus japonicus Gifu genome v1.2.
TACTGTTAAAGCTTGACTCATTTACCACCTCCTGCCGTGAAAGTAACCAAGTTGGATTAAAGAAAATGCCAAGAGAGCGT GGAGATAGGAAGCTCCTAGCCAAATAAATATAAATGAATAAAAAAACACTGGAACAACTCCAGAGGGTTGAAGAATTGGT CGACCCTGTGGTTGTTAAGCATTGTAGAGTAACCGAGAACCTAAAAGAGAAGAGGGTGAGTTTGGGACAAGGGAGATGTT CCAGAGATAGATATACACTGTAGTCTGTACTCTGTAGTAGTTTGTAGTAGTAGTAGTAGTAGTAGTAGGAGAAGAAGAAG GGTGGAAAAAAAGGGTGTCTATAGTTTTGAAAAGTTGGAAAGAGTGGTTGGAAAAAAAGGGTATATAGTAAGTGAGTGAG AAGGAGAAAGAAAAAAGAGAAAGAAAGATGGTGGGCTCAGGATCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGAT GATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCAGACTGGACTTATTCTGTCTTCTGGACCATTCGTCCTC GCCCGTATATACTTCTCTCTCTCTCTCTCTCTCTATGTTTGTGTGTTTTTGTGCAAGTTTATCTCTTGTTTTCAATCTCA GAGTTTGTCAATGGTAGAGCTGTTTCCTGAACTGGGTATTGTTCATTTTGTTGCAGAAGAGTTAGAGGCGGTAATGGCTG CAAGGTTGGAGATGACAACGGCAGCTTGTGAGTGTTCCATGTACAAACAGTGCATACATCTAACAGTGTGCATAACATCC AACAAACTCTTCAATTTTCACTCTATCTCTTTTTACTATCATATATTTCATCAATTATTTCTCCTTCTTTCGCATCCTCG AGATCTCTGTTGGATGTCTAGGCTGTGCAAATGTTTACAAATAATTTTCCTAATTTGGGTAATGTTTGGTTTATGGTAAT AATTTTATGAAGCTTGAGCTTACTTGTACTTTTTTTTTGTCTGTTTTTTGGGGTTAAATTCTGATGTAGGATGTTGATGT GGGAAGATGGGTTTTGCCGAGGAAGGGGTCTGGATGATATTGATGGAGAGGATCCTGTCAGAAAAGTTTTCAGCAAAATG TCCATTCAGTTGTATAATTATGGAGAAGGGTGGGTACTGGGTAGGTGTTTGTTATTTTGTGGTTTCTATCATTCTCTCAC TCTCTCTCTGAAGTCTGAATCTTCAATATCCAATGGCATGTGGAGGGAGTAGTTGTTACTTAATTAGATACAACCAGAAT TCTCTCTGATTGGTATGCTCTGATTTTGAAACAGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTT AAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTGTATGCATTTCAACCCTTTA CCACATCCAATCACACTTCTAGTTCTCTCTGATCTCTTGTTTTTTATTTATTTATTTAAAATATAGATATAGATGGAGAC TCTACATTACAATTCAATCTGTGTTAAATTTTGTTCTTTTTCTATTGGTTATGTTTAGCTATTTGATGAATGATTGACTC ACTCAACCTCTGTTGATGTTATTAATTGCAGCTTCCTCCTGAATGGACAGACCAGTTTGAGTCAGGCATTCAGGTCAGAA AAACAGAATCATTGTTAACTTTGGCTCTTGGCTATTATTGTTCTTAGACATATTTCTTTTTGGAATTTTCAACCCATTTT GTTTGCATTTGTCCCATGACCAGACCATAGCTGTAATTCAAGCCGGACATGGCCTTCTCCAACTTGGTTCTTGCAAGATT GTGAGTAAATTCATGCCTTCTTATCTGTAACTTCATAAATTACCTCTGCCATTTTTACACTGTTTATATGCTTGGCTACT TATATATTGGGTAGAAGAATGTCACAAATATCAAATATTTGATATTTTTGCTTTCTATTTTCAGATTCCTGAAGACCTCC ATTTCGTCCTAAGAATGAGACACACTTTTGAATCTCTAGGTTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCA ACAAGGAACTCTTCTTCTTCAACTTCAATACCTTCGAAACTATCCACCATTCCGATTCGGCCACCTCCTCCACTCTTCAA CTGGGGTCAGAGGCCACTCAATCCTGCTACTTCTCTGCTATCGTCGCCCAATTTTCAGCAACACGCAGCGAGGCTCAGGT TTCCACAGGCCAAAGATGAGACACACTTGTTTCTCATGCCTCACGCATCATCTGAAACTGCGCGAATTGAAGACATGATG GGGGAGCACGAAAATGACATAAAATGGCCTAATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACCGATGATGCTAA GCTTTTGTTCAATCCAGAGAGCTTGGGGAGCAAACTTGGTGACCAGAATCACAATCACCACCATTCTCTTGATCAGCATC CCAATTCCTCCAACATGATGCAAAATTCTGGTGAAGCCAACCCTAACGACTTCTTGAGCTTGGATAGCCACTCAGAAGGT GCAAGAAAGATGGATAAGTTTAAGAGGAGCTTCACTTTGCCTGCAAGAGTGGCTTCATCATCTTCATCCACTTCAATGGA GCACCATCACCATCATCAACAGCAAGGTGTGGAGTATAGGAATTCAGAAGGAGGAATGTACCCGGATGTCATGGAGACCT TTTTGGAGTGAATGAAGGGAGGTTAGAAAAGGTGAGTTCTAATACGGGAAAAAAAATGAATGATGAGAATTTGTATCTAG GAAAAGTTATTTGTGTTCCTTTTCATGTGTTTGCTTTTCACTTTGTATCTTGTGTTTCTTTGTCTTCTACTTAATGAGAC TTAATTGATGATCATTTGTTTTTTCTTTTAGTTCAATTAGACATAAAGTTTTCAAGGGCTTACGTCTCATGGATATCTTT TATTGGATTATCATTTGTACGATTTTTTTAATAAGAGGAAAGCTAACAAGTAACAACACAAAGAAAACTAGCCTAGCCTA AAAAAAAAATAGCCAATAGCATCAAGATATAGAGTAAAGGAAGGAGGTCGTTTCCATACACAATACGAAGGGCTGTCTCT AGCCGTTGCACGAGCCAAATTAAACAATCAGTAGTGTTATTCAACTCGGGCTGAATATGGTGGAATCTAACACACCAATC GATATGGAGCATGGCTCTAATTCTCAGAAATGTTTCTCTAGCCCATAAGAGACCCACATCCTATTGCTTTGAAGGAAACA AACAACAACAAGACATTTAGAAGCACAGACAATATCCGTGCAACCCGGGTCTTGTGCGTGCTTAAGCTCTATCTCAATGC CAACACCTCTACCAAGGGAGCGTTTTCGTGGCCAAAACTAGTTGAAACACCATAAATCCAACACCCATACTTGTCGCGGA T
CDS sequence (LotjaGi3g1v0156400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGGCTCAGGATCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAC CGTCTGTCTTAACTCAGACTGGACTTATTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTTAGAGGCGGTAATGGCT GCAAGGTTGGAGATGACAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGGTCTGGATGATATT GATGGAGAGGATCCTGTCAGAAAAGTTTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAA AGTTGCATCTGATAAGTGTCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGA GCTCCTTTGATGCTCTTCCTCCTGAATGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCCGGA CATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTCGTCCTAAGAATGAGACACACTTTTGA ATCTCTAGGTTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAACTCTTCTTCTTCAACTTCAATAC CTTCGAAACTATCCACCATTCCGATTCGGCCACCTCCTCCACTCTTCAACTGGGGTCAGAGGCCACTCAATCCTGCTACT TCTCTGCTATCGTCGCCCAATTTTCAGCAACACGCAGCGAGGCTCAGGTTTCCACAGGCCAAAGATGAGACACACTTGTT TCTCATGCCTCACGCATCATCTGAAACTGCGCGAATTGAAGACATGATGGGGGAGCACGAAAATGACATAAAATGGCCTA ATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACCGATGATGCTAAGCTTTTGTTCAATCCAGAGAGCTTGGGGAGC AAACTTGGTGACCAGAATCACAATCACCACCATTCTCTTGATCAGCATCCCAATTCCTCCAACATGATGCAAAATTCTGG TGAAGCCAACCCTAACGACTTCTTGAGCTTGGATAGCCACTCAGAAGGTGCAAGAAAGATGGATAAGTTTAAGAGGAGCT TCACTTTGCCTGCAAGAGTGGCTTCATCATCTTCATCCACTTCAATGGAGCACCATCACCATCATCAACAGCAAGGTGTG GAGTATAGGAATTCAGAAGGAGGAATGTACCCGGATGTCATGGAGACCTTTTTGGAGTGA
Protein sequence (LotjaGi3g1v0156400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGSGSGASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRGLDDI DGEDPVRKVFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAG HGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNSSSSTSIPSKLSTIPIRPPPPLFNWGQRPLNPAT SLLSSPNFQQHAARLRFPQAKDETHLFLMPHASSETARIEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGS KLGDQNHNHHHSLDQHPNSSNMMQNSGEANPNDFLSLDSHSEGARKMDKFKRSFTLPARVASSSSSTSMEHHHHHQQQGV EYRNSEGGMYPDVMETFLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 419 | 419 | 8.3E-241 | – | |
| PANTHER | 1 | 419 | 419 | 8.3E-241 | – | |
| Pfam | 21 | 186 | 166 | 5.9E-27 | ||
| MobiDBLite | 319 | 359 | 41 | - | – | |
| MobiDBLite | 335 | 357 | 23 | - | – | |
| MobiDBLite | 378 | 408 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0156400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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